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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
YAB1
<---------
AHL20(1)
--------->
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
<--------
HAHB4
--------->
ATHB51
<---------
ICU4
<--------
ATHB1
-------->
HAHB4
--------->
YAB1
--------->
AHL20(2)
<---------
ATHB51
<---------
YAB1
--------->
ICU4
<---------
YAB1
<---------
ICU4
--------->
ALFIN1
--------->
YAB1
----------->
GT1
--------->
ICU4
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
<---------
YAB1
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
--------->
YAB1
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<---------
AHL20(2)
<---------
ANAC46
<-----------
GT1
----------
<---------
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
--------->
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
----------->
GT1
--------->
AHL20(2)
------>
GT1
<---------
AHL20(2)
--------->
ZAT6
<-------
GAMYB
--------->
At4g35610
gttaaaaacgaattaaataataataattaattaaaactagttaggggtgttaattgtaattacacaattactaaaaacatctgagtaataaaaaaaagat
2445500
--------->
ARR11(3)
------>
ZmHOX2a(2)
--------->
RVE1(1)
--------->
GLK1(1)
--------->
TOE2(3)
<---------
ARR11(3)
<---------
KAN4(2)
--------->
AHL20(2)
<---------
HSFB2a(2)
<------
ZmHOX2a(1)
<---------
ICU4
--------->
HSFB2a(2)
--------------->
AGL15
<---------
AHL20(2)
--------->
ICU4
--------->
ARR11(3)
<---------------
AGL15
--------->
ATHB51
----------->
GT1
--------->
CCA1(1)
<-----------------
AGL3
--------->
ICU4
--------->
GLK1(2)
--------->
RVE1(1)
<-----------------
AGL2
<------
ZmHOX2a(1)
<---------
ARR11(3)
--------->
AHL20(2)
-
>
DOF2
<---------
TOE2(3)
<---------
TOE1(2)
--------->
CCA1(1)
<---------
AHL20(2)
<-
gtgttctattttaggaataaacatacaaatgtgttttatcttaggaattatttcttaaaaaatcttgtaatttttagaaataaatatctgatctcttccc
2445600
<-----
<--------
----------->
HVH21
--------->
LBD16
--------->
MYB52(1)
------>
MYB83
<---------
ARR14(2)
------>
MYB46(1)
---------->
ID1
--------->
ARR14(2)
-------->
YAB1
<---------
AHL20(2)
<---------
MYB59
--------
ATHB12
<---------
ICU4
<-----------
GT1
--------->
YAB1
----------------->
AGL1
aataacaatttttgtcccattagtaccaaaaccatatttcaatttgggatttatttctataatatcaaacccgaattttgtaaaccgaaccgggacagga
2445700
--------->
WOX13(1)
<---------
ICU4
<---------
ATHB12
--------->
YAB1
<-------
TEIL
------->
PIF5
<-------
PIF4
------->
PIF4
------->
MYC3
<-------
MYC2
------->
MYC4
<-------
MYC3
------->
MYC2
<-------
PIF5
<-------
MYC4
<---------
ANAC58
--------->
ANAC55(2)
<-------
TEIL
--------->
ANAC46
<---------
ANAC46
<---------
MYB46(3)
--------->
ANAC58
<---------
ANAC55(2)
--------->
ALFIN1
--------->
ANAC58
<---------
TGA1a
<<<<<<<<<<<<<<<<<
LFY
--------->
HSFB2a(2)
<----------
ID1
--------->
YAB1
<---------
YAB1
<------
ZmHOX2a(2)
<---------
HSFB2a(2)
-
ZmHOX2a(1)
--------->
ZAT18
--------->
TGA1a
<---------
ARR11(3)
------->
TEIL
---
RAV1(2)
<---------
ZAT18
<---------
ANAC58
--------->
ARR11(3)
<---------
CCA1(2)
<--
taatgggacaaatgagcacttgtattatcacgtgcattaatcattcaccagttttatagtagatcacagtggttcatatgtatctagacgcaaactttga
2445800
--------->
YAB1
----------->
RAV1(2)
*
TSS
<---------
ICU4
------>
MYB46(1)
------>
MYB83
--------->
MYB55(1)
<---------
ALFIN1
--------->
AtMYB61
<---------
MYB111(1)
<
--------->
DEAR3(1)
<
--------->
ICU4
-------->
P
<
------------>
CBF
--------->
MYB46(3)
<
------->
GAMYB
--------->
ZAT14
<---------
MYB55(2)
<
------------>
CBF
------>
ZmHOX2a(2)
<---------
MYB111(2)
--
--------->
ANAC58
<------
ZmHOX2a(2)
--------->
MYB46(3)
<------
--------->
ANAC46
<---------
AGP1
--------->
ANAC58
<---------
ICU4
<------
--------->
ANAC58
--------->
ARR11(3)
--------->
ANAC58
--------->
YAB1
--------
--------->
YAB1
<---------
ARR11(3)
--------->
ANAC46
<---------
YAB1
<---------
ZAT6
-------
ATHB12
--------------->
AtSPL8
<---------
ZAT14
<---------
MYB46(2)
--------->
LBD16
atcattcatcaacgcaatctaagtacaaatatagatctcactgcaatgtttcaagc
accaacctgatcatcatcaaaaccatttcatccgtagtggtca
a
2445900
--------->
MYB52(2)
<---------
MYB46(3)
<------
MYB83
<---------
DEAR3(1)
<---------
AtMYB61
<---------
MYB52(1)
<----------
DOF2
--------->
ATERF1(1)
<---------
At4g35610
<------
NtERF2
--------->
ARR14(2)
<---------
RAP2.3(1)
<---------
ARR14(2)
------>
NtERF2
<---------------------
WRI1
<---------
ATERF1(1)
--------->
SPL7
<---------
ERF1
--------->
ALFIN1
<---------
ANAC55(2)
---------
RAP2.6(2)
<---------
SPL7
<---------
ANAC58
---------
ANAC46
<---------
MYB46(3)
<---------
bZIP60(2)
<---------
ANAC58
---------
DEAR3(1)
<---------
ANAC46
--------->
ANAC55(2)
<--------
---------
RAP2.3(2)
<---------
ANAC58
--------->
ARR14(2)
--------->
ZAT18
---------
RAP2.3(3)
<---------
ANAC58
<---------
ARR14(2)
--------->
DAG2
------->
RAP2.6(3)
--------->
ALFIN1
--------->
LBD16
--------->
DAG2
---
WRKY38(1)
<------
MYB46(1)
--------->
ALFIN1
--------->
ANAC46
---------->
DOF2
---
WRKY12
<-------
GAMYB
<------
ZmHOX2a(1)
<---------
LBD16
--------->
TOE2(3)
->
WRKY18(1)
<---------
MYB46(3)
<------
ZmHOX2a(1)
<----------
DOF2
<---------
ANAC46
---------->
DOF2
tggcggcttctccgttggtggttcagaaaacagaggaggagtggcgtgcggttctttctccggagcagtttcgtattcttcgtcaaaaaggcactga
gta
2446000
<-----------
RAV1(1)
<---------
TOE2(2)
------->
TEIL
<---------
ANAC46
<---------
ANAC55(1)
<---------
ANAC55(2)
<---------
ZAT18
<----------
DOF2
--------->
ZAT18
<---------
DAG2
<---------
YAB1
--------->
ANAC55(2)
<-----------------
AGL1
--------->
ATHB12
<---------
ANAC58
<-----------
GT1
<---------
TOE2(3)
--------->
ARR11(3)
<---------
ANAC58
-------
AtSPL3
<----------
DOF2
<----------
DOF2
--------->
ICU4
<---------
MYB52(1)
cgtttttgttttgtttttctttcccttttggtataatttcttttaatgaaattttgggaatgattttgatagtgcccttacgtatgttggattagccatt
2446100
<---------
ANAC46
<---------
ANAC58
<---------
ANAC58
--------->
O2
<---------
O2
--------->
YAB1
--------->
TGA1a
<---------
ICU4
<---------
TGA1a
<--------
HAHB4
<---------
ANAC58
--------->
ATHB51
------>
MYB83
--------->
ICU4
--------->
ATHB12
--------->
TOE1(2)
<---------
YAB1
<---------
YAB1
--------->
TOE2(2)
--------->
YAB1
============================================
bZIP_DOF
----------------->
AGL3
<----------
DOF2
--------->
YAB1
<---------
TOE1(3)
<---------
DAG2
--------->
ANAC46
<---------
ANAC58
<---------
TOE2(3)
----------->
HVH21
<-----------
GT1
------>
MYB46(1)
agacttgagtaatttagggtttcataattagcatcatacatgtgagtatgtgaccttttgatttgagtctttttacccaagaatacctacgtggcttgga
2446200
--------->
ANAC46
--------->
ANAC58
<---------
AHL20(2)
--------->
WOX13(1)
--------->
AHL20(2)
<---------------
AGL15
<---------
AHL20(2)
<-----------------
AGL2
<---------
AHL20(2)
----------------->
AGL2
--------->
AHL20(1)
----------------->
AGL1
--------->
AHL20(2)
----------------->
AG
<---------
AHL20(1)
----------------->
AGL3
--------->
ARR11(3)
-------->
P
--------->
YAB1
--------------->
AGL15
<---------
ARR11(3)
--------->
MYB52(1)
<-----------------
AGL1
<---------
ANAC58
--------->
ANAC58
<---------
YAB1
<-----------------
AG
<---------
ANAC46
<------
NtERF2
<---------
YAB1
<-----------------
AGL1
<---------
ANAC58
--------->
MYB59
<---------
GLK1(2)
<-----------------
AG
<-----------
RAV1(1)
<---------
AHL20(2)
--------->
MYB46(3)
<---------
REM1(1)
ttcagaacattgttgctcgtttaatatattaattaggctgcaagcaaccgttgaaagattattatagatgtagaaccaattagggaaattggatgatgtt
2446300
----
<-----
-------
<------
--------->
ANAC55(2)
<---------
ANAC55(2)
<------
MYB83
--------->
YAB1
--------->
ICU4
<---------
AHL20(2)
------
<------
MYB46(1)
<------
ZmHOX2a(1)
<-----------
GT1
----------->
GT1
--------
ttgtttttggaatttggttttgtttgtatcatatataaggagagtattgattcagtgtttcactgtttcatataagtagtttattgaagtatgtaatgat
2446400
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AGI:
At4g04830.1
Description:
methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein. similar to methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G04810.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83184.1); contains InterPro domain Methionine sulphoxide reductase B; (InterPro:IPR002579); contains InterPro domain Mss4-like (InterPro:IPR011057)
Range:
from: 2445857
to: 2447084
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.