Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------ANAC58                                           --------->ZAT14      <---------ANAC58             ------->TEIL                  <---------ZAT18      <-------GAMYB               <---------GLK1(2)            <---------At4g35610     <------MYB83              ------>ZmHOX2a(2)               --------->At4g35610     <------MYB46(1)          --------->At4g35610              <---------ZAT2     <---------MYB46(3)      --------->ARR11(3)                --------->ZAT2            --------->GLK1(2)    <---------AtMYB61        <---------ARR11(3)            --------->ANAC46      ------>ZmHOX2a(1)  -  <---------MYB52(1)     <---------AtLEC2                 <---------REM1(2)--------->At4g35610      -   caacgtttggttgtccagacaaatgctgcatgatctgaatctctgtcttcacatcttctctacccagctcactaattagcttcctcttgagaatcgattt  2408200                                                     <---------ALFIN1                                                     --------->AtMYB61                                       --------->ANAC58                                       --------->ANAC55(1)                                       <---------ANAC55(2)                                       --------->ANAC58                                       --------->ANAC55(2)                                       --------->ANAC46                                      <-------TEIL  --------->MYB46(3)           --------->At5g28300  --------->YAB1                    <---------ARR14(2)          ------>MYB83  <---------ZAT2 -------->ANAC58                    --------->ARR14(2)        <---------MYB59 --------->ZAT2------>ZmHOX2a(1) -------->ANAC58           <----------DOF2       ---------->DOF2------>MYB46(1) ----------->GT1   gcaagcataaatgttcccagtcccaatctctttgcacatatacgtaatccctaaaccacctcgacctaattctctccccaagctgtaaaatttcctgatg  2408300                                <---------HSFB2a(2)                             --------->ARR11(3)                             <---------ARR14(2)                             <---------ARR11(3)                             <---------AGP1                             --------->ARR14(2)                                     --------->LBD16                           <XXXXXXXXXXXXXXXXXXXXMIR851-5P                         <---------LBD16                         <---------LBD16                                          ------>ZmHOX2a(2)             --------->TOE1(3)  --------->HSFB2a(2)                            --------->ATHB12             <---------MYB59<---------CCA1(2)                                 <---------YAB1             --------->TOE2(3) ------>ZmHOX2a(2)                    <---------TOE2(3)         <------       ----------------------->TaNAC69(2)                           <---------TOE1(3) ------>NtERF2 -   tcttcgaatggtttacctaaaatcgtctctggatctcgaactgagatgggtatcgatggtgatgggatttgaggtttacgatgatcggggacttgatcaa  2408400                                               <------NtERF2                                               <---------MYB52(1)                                              ------>NtERF2                                             --------->RAP2.3(2)                                             --------->DEAR3(1)                                             --------->RAP2.3(3)                                             --------->RRTF1(3)                                            --------->DEAR4(2)                                            --------->RRTF1(1)                                            --------->ERF1                                            --------->RAP2.3(1)                                            --------->ATERF1(1)                                            <------NtERF2                                           <---------ATERF1(1)                                           ------>NtERF2                                           --------->ABI4(1)                                          --------->RAP2.3(3)                                          --------->DREB2C(2)                                          --------->RRTF1(2)                                          --------->DEAR3(1)                                          --------->ATERF1(2)                                          --------->RAP2.3(2)                                          <---------DEAR3(1)                                          --------->RAP2.6(2)                                          --------->RRTF1(3)                                         --------->DEAR4(2)                                         --------->RRTF1(1)                                         --------->RAP2.6(1)                                         --------->ORA47(2)                                         --------->ATERF1(1)                                         --------->ERF1                                         --------->RAP2.3(1)                                        --------->At4g35610                                        --------->ABI4(1)                                        <---------ATERF1(1)                                        ------>NtERF2                                        <---------At4g35610                                        --------->LBD16                                       --------->ANAC46                           --------->ANAC58                                 <----------DOF2                         --------->At4g35610                              --------->ARR11(3)                         <---------At4g35610                              <---------ARR11(3)                    <---------ZAT14                    --------->MYB52(1) --------->DEAR3(1)       <---------MYB52(1)-------->P--------- ---WRKY38(1)      --------->ATHB51   <---------LBD16          --------->LBD16    --------->ANAC58 -------->CCA1(2) --------->ICU4------>ZmHOX2a(2)            <---------LBD16    --------->MYB46(3) <-   cgatatgggtttgaactggaattatcggaattgatctttctccgccgccgtcgttttgagttttccggtgtttactgctgaaacaacccattagtaaagg  2408500                                                                 *TSS                <------------CBF                                                           <---------WOX13(1)       -------->ATHB1    <----------DOF2                                      --------->ATHB12           --------->ATHB51    <---------DAG2                                      <---------YAB1             <---------YAB1 ->DOF2 <---------ANAC46                                <---------AHL20(2)   <---------ANAC46 -----ZmHOX2a(1)                 >>>>>>>>>TBF1     <------ZmHOX2a(1)      <---------TOE2(3)   aggagacttttcgtagactttcttcttggattgaagaagaagataaacttggaggaatttgattgagaacacatttgtggtttgtattattgtatatgtt  2408600                                                                                             --------                                                                                        ------>ZmHOX2a(2)                                                                                       <---------GLK1(1)                                                                              --------->ARR11(3)                                                                              --------->AHL20(1)   <-                                       <---------ZAT2                         <---------AHL20(1)  <--                                       <---------At4g35610                 --------->AHL20(2)<-------                                       --------->ZAT2                --------->LBD16   <------ZmHOX2a(2)                                       --------->At4g35610           ----------->GT1  <---------ARR14(3)                           --------->CCA1(2)                      --------->MYB52(1)  --------->ARR11(3)                          <---------ARR11(3)         <---------DAG2<---------LBD16    <---------ARR11(3)       ----------->GT1    --------->ARR11(1)         <----------DOF2----------->GT1   --------->ARR14(3)   tgactcgaactgtaagaaatttttgaaagatttgaattttgagctggattttggacttttttttcatataccggaaaaaatatatcgagatctcagattg  2408700     <---------HSFB2a(2)     --------->HSFB2a(2)    <---------LBD16 <---------ZAT14 --------->At4g35610                 <---------bZIP60(1) <---------ZAT2                --------->ATHB12 <---------At4g35610           -------->ATHB1                                                 <------ ->ARR14(2)    --------->ATHB12--------->ATHB51                                              <------- --------DEAR3(1)             --------->ICU4       --------->YAB1                <------ZmHOX2a(2) -------At4g35610             <---------YAB1    ---------->DOF2                <---------GLK1(1) --ARR14(2)----------------->AGL1    --------->bZIP60(1)   <----------DOF2---------->DOF2 --------->YAB1   ggctgctctggaggccttaattgggccttagaattattgatgtcataagagaaagataactcttttatatttcttacaaagagatcagtttataatcttt  2408800              <-------GAMYB             ----------->GT1             <------MYB46(1)             <------MYB83             <---------MYB46(3)           <--------P          <---------ANAC58          <---------ANAC58         --------->ATHB12                                                                          <-         <---------MYB46(3)                                                                       ---         --------->MYB55(2)                                                                       <--         <------MYB83                                       ----------->GT1                       ---     <<<<<<<<<RAP2.2                     --------->AHL20(2)--------->MYB59                        <-- <----------DOF2    <---------ICU4   ---------->DOF2       --------->MYB46(2)             <---------HSFB2a(2) ----DOF2<------MYB46(1)       <----------ID1    --------->AHL20(2) <-----------HVH21     --------->HSFB2a(2) --ICU4<---------WOX13(1)<---------YAB1----------->GT1   <<<<<<<<<MYB98           --------->YAB1-----   attctttagattggttggttaaaaattatgttgaagacaaaaagaaaataagaaaataagttaggcaaaatgtcaatggtccaatattagtttcagaaaa  2408900                                                                                   --------->YAB1                                                                                --------->YAB1                                                                               <---------YAB1      --------->TOE2(3)                                                        --------->ICU4  --------->AHL20(2)                                                      <------MYB83  <---------AHL20(2)                         <---------AHL20(2)           ----------->GT1 --------ICU4                                --------->AHL20(2)           <------MYB46(1)           - ------>ICU4                                --------->AHL20(2)           --------->MYB59        <---- -------ATHB51                   <---------ATHB12                   <---------TOE2(3)           ----- ------>AHL20(2)    ----------->GT1       --------->AHL20(2)      --------->AHL20(2)           ------ -------AHL20(2)   --------->MYB46(2)------>ZmHOX2a(2)            <---------AHL20(2)  ---------->DOF2 ---->YAB1         --------->MYB59--------->YAB1                 --------->AHL20(2)--------->AHL20(2)   ataattaaacttaaaacaagttaggcaaaatgccaatgatccaatataaaattactaaaatagactaattaatatttggtaataataaaaaagaatataa  2409000                                     --------->MYB52(1)                                   <---------MYB52(2)                    <---------AHL20(2)      ----------->GT1     <---------ARR11(3)          <------------MYB.PH3(1) -------->AHL20(2)        --------->ARR11(3)        --------->MYB52(1)   --------->AHL20(2) -----AHL20(2)           --------->RVE1(1)       --------->YAB1  --------->AHL20(2) ---->AHL20(2)        <---------AHL20(2)       <---------TOE2(3) <---------AHL20(2) --->AHL20(2)        --------->AHL20(2)       ---------->DOF2   <---------AHL20(2)               ----   aattaaaacagaaaaactcatgaattaatatctgataactaacagttttaaagataacagttttattttaaatattaaaacaaaattgtccaagaacaaa  2409100  Previous    Next  AGI:  At4g04740.1    Description:  CPK23 (calcium-dependent protein kinase 23); calmodulin-dependent protein kinase/ kinase. similar to CPK15 (calcium-dependent protein kinase 15), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G21940.1); similar to CPK21 (calcium-dependent protein kinase 21), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G04720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17935.1); similar to calcium-dependent calmodulin-independent protein kinase isoform 1 [Cicer arietinum] (GB:AAP72281.2); similar to calcium-dependent protein kinase [Solanum lycopersicum] (GB:CAC87494.1); contains Range:  from: 2404199    to: 2408565    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.