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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                            <--------HAHB4
                                                                            <---------ICU4
                                                                           <---------YAB1
                                                                   --------->TGA2(2)
                                                                 --------->ANAC46
                                                                 --------->ANAC55(1)
                                                                 <---------ANAC55(2)
                                                                 --------->ANAC55(2)
                 <-------GAMYB                      <-----------RAV1(2)    --------->ICU4          -
                <---------MYB46(3)        ------>ZmHOX2a(1)      --------->ANAC58            <------
                --------->MYB111(2)   ------>ZmHOX2a(2)          --------->ANAC58            <------
     <-------GAMYB                   --------->GLK1(1)          --------->SPL7<---------YAB1 -------
     <---------At4g35610             <---------GLK1(1)--------->ANAC46   --------->YAB1      -------
    --------->ALFIN1                <---------ARR11(3)--------->ANAC58  <---------YAB1       <------
----MYC3    <---------TOE1(3)       --------->ARR11(3)--------->ANAC58<---------CCA1(2)  <----------
--->MYC3    <---------TOE2(3)   --------->YAB1  <---------ARR11(3)<-----------HVH21 <---------YAB1 <
 
atggagggagttgctaaggttgttagagatgtctaagatgatctccttcaagttctcaggcaattcatacgtcatatcattattattctcattgtcactt  1012600
                   ------->TEIL
                   <---------ARR14(2)
                   <-----------ARR10
                   --------->ARR14(2)
                   --------->ARR11(3)
                --------->O2
                --------->ANAC58               ----------->RAV1(1)
                --------->TGA1a              --------->At4g35610                                  <-
                <---------O2                --------->ANAC58                              ------>ZmHOX2a(2)
                --------->ANAC55(1)         --------->ANAC58                             <------ZmHOX2a(2)
                --------->ANAC46        <---------MYB46(3)                              --------->ARR14(2)
                --------->ANAC55(2)     <------MYB83                                    --------->ARR11(3)
-------->HSFB2a(2) <---------ARR11(1)   <------MYB46(1)                                 <---------ARR14(2)
---O2      --------->ANAC58            <---------DEAR3(1)                               <---------ARR11(3)
---ANAC55(2)    <---------ANAC55(2) <---------ANAC58           --------->WRKY12   <------ZmHOX2a(2)
-->O2--------->MYB46(3)             <---------ANAC46         <-------GAMYB       --------->ARR11(3)
-->ANAC55(2)    --------->ANAC58    <---------bZIP60(2)     <---------ANAC46     <---------ARR11(3)
---TGA1a   --------->ANAC58      ----------->HVH21       <---------bZIP60(1) ===================HOX2a_HOX2a
-HVH21     --------->ANAC46      ----------->TGA1        --------->bZIP60(1) ====================HOX2a_HOX2a
---------HSFB2a(2)<---------CCA1(2) <---------ANAC58   <---------TGA2(2)     <------ZmHOX2a(1)    <-
 
gtcgagaaaccatcaagacacgtatcttggtatgtcatgacgttggtgagcaacatgctgatgtcgttgaactcaagagaggaagatcgaagatcggaga  1012700
                                                                          <------MYB46(1)
                                                                          <------MYB83
                                                                       <---------MYB52(1)
                                                              --------->YAB1
                                                             <-------TEIL--------->MYB59
                     <-----------HVH21                     --------->TOE2(3)
           <---------DEAR3(1)                        --------->ANAC58  <<<<<<<<<MYB98
         <-----------HVH21                           --------->ANAC58 <-------GAMYB
  <---------ARR14(2)<---------bZIP60(1)              <---------ANAC55(2) <---------AtMYB61
  --------->ARR14(2)--------->bZIP60(1)              --------->ANAC46<------MYB46(1)
--------ZAT14    <---------AtMYB61                  --------->ZAT18  <------MYB83                <--
--------LBD16<------NtERF2         --------->LBD16  <---------------------WRI1     ---------->DOF2 <
 
ctgcggtttcgaggtcggagatggtgtcatcgagtagcccgagacagtcttcgaatgcgcaacgttcatagtgggttaggtttggaaaaagacgggtttg  1012800
                                           <------MYB46(1)
                                           <------MYB83
                                          <---------AtMYB61
                                        <---------MYB52(1)      --------->ZAT2
                                       <-------GAMYB  --------->LBD16                  <-------GAMYB
                              <----------DOF2         <------NtERF2            <---------AtMYB61
   <------NtERF2             --------->TOE2(3)      --------->ZAT18       <------MYB83----------->GT1
 <---------DEAR3(1)          --------->TOE1(3)      <---------LBD16<---------LBD16   <---------ANAC46
-------AtMYB61 <------ZmHOX2a(1)      <---------MYB46(3)   --------->YAB1 <------MYB46(1)
-----------HVH21          <-----------GT1 --------->MYB59 <---------YAB1 <---------AtMYB61
 
gaggtcggagaagttggaggaagcgagattaacctttaagatggttaggtttaagtccgcgatgataagctcggggatggttttggtttcggttaaacgc  1012900
                       --------->ATHB12
                       <---------MYB46(3)
                <---------YAB1          ------->GAMYB                 ----------->HVH21
            <---------ANAC46 --------->At4g35610          <------ZmHOX2a(1)
         --------->ALFIN1<---------WOX13(1)<---------MYB46(3)         <---------ZAT6
         <---------AtMYB61   <---------At4g35610         <----------ID1
   <---------ANAC46   <---------YAB1 --------->MYB52(1) --------->MYB59          ----------->GT1 <--
 
tgggttttgtgagtggtgtatgatggtgattgagatgaaacaacggtggataagaagattaggaaaaagattagtgacagtaagttgaaaataatgtgtt  1013000
                          <---------YAB1
                         <-----------GT1
                        <-----------GT1          <---------ZAT6
                        --------->YAB1       <---------ZAT14
                    --------->AHL20(2)    >>>>>>>>>ARR1
                   <---------YAB1         >>>>>>>>>ARR2
      --------------->AGL15             <---------TOE1(3)
      <---------------AGL15             <---------YAB1                                     ---------
     <-----------------AGL3             <---------TOE2(3)                  --------->MYB52(1)
     <-----------------AGL2--------->YAB1 <------------CBF           <----------ID1       ----------
-------AtMYB61  <---------YAB1      <----------DOF2                ---------->DOF2 ----------->GT1
 
ttggtttttctctaattggatgattatttatcattttttctttaagattgtagtgatagtagaaaattttaaaagacaaaactgaaatgtaacaaaagtg  1013100
                               ------------>CBF
                              <-----------GT1                          ---------->DOF2
                           ----------->GT1                          --------->AHL20(2)
                          --------->DAG2                         <---------AHL20(2)
<------------CBF    ------->GAMYB    ----------->TBP            --------->AHL20(2)
<---------GLK1(2) --------->At4g35610<---------AHL20(2)     <---------ARR11(3)
>DAG2          <------ZmHOX2a(2)     --------->AHL20(2)  ----------->RAV1(1)           <---------LBD16
>DOF2<---------MYB46(3)  ---------->DOF2                --------->ANAC46      ----------->GT1
 
aaagattgtggttcttagatcaactcccaaaagtaacaatataaatacgaagaacatatacaacatattaaataaaaagagaagataaactggggagaag  1013200
                                                                                                 ---
                                                                                                 ---
                                                                                                 <--
                                               <---------AHL20(2)                            -------
                                              --------->AHL20(2)                <---------AHL20(2)
                                              <---------AHL20(2)                --------->AHL20(2)
                                          <---------AHL20(2)                    --------->AHL20(1)
                                          --------->AHL20(2)                    <---------AHL20(1)
                                          --------->AHL20(1)                   --------->AHL20(2)<--
                                          <---------AHL20(1)             <------------CBF    <------
                                       <---------AHL20(2)         <---------AHL20(2)       ---------
                                       --------->AHL20(2)        --------->AHL20(2)     <---------AHL20(2)
                                      --------->AHL20(2)         <---------AHL20(1)   <---------YAB1
                                   <---------ZAT6                --------->AHL20(1)  <---------AHL20(2)
   <---------YAB1      <----------DOF2<---------AHL20(2)         <---------AHL20(2)<---------AHL20(2)
 
aatattatgttagtcaaactaaaattctttagattatagtattaatttattaattcaacttaaactaatttattcaaattgattatattattttaagtaa  1013300
       --------->AHL20(2)
       <---------AHL20(2)
      <---------AHL20(2)     --------->TOE2(3)
      --------->AHL20(1)    ----------->GT1
      <---------AHL20(1)    --------->ANAC58
      --------->AHL20(2)    --------->ANAC55(2)                                                  ---
  <---------AHL20(2)        --------->ANAC58                                                    <---
 <---------AHL20(2)         <---------ANAC55(2)                                                 ----
 --------->AHL20(2)         --------->ANAC46                                                 -------
------>AHL20(1)        ------>ZmHOX2a(1)                                                    <-------
------>AHL20(2)    <-----------GT1                                                          --------
-------AHL20(2)  --------->HSFB2a(1)                                                    <---------AHL20(2)
-->AHL20(2)      <---------HSFC1(2)                                   <-------TEIL      --------->AHL20(2)
-------AHL20(1)  --------->HSFC1(2)                           --------->ARR14(2)        <---------AHL20(1)
---AHL20(2)      <---------HSFB2a(1)    <-------TEIL        --------->LBD16             --------->AHL20(1)
>ANAC55(2)   <---------TOE2(3)     --------->AHL20(2)   <-----------GT1         --------->At4g35610
 
ttaattaaataaaattaagaattttcctactacgtaaaaaaaatgcatagactacaaattttccgaatacatatacatatagtagcttcaataaaataaa  1013400
 <---------AHL20(1)
 --------->AHL20(1)
 --------->AHL20(2)
 <---------AHL20(2)
<---------AHL20(2)
--------->AHL20(2)                                                       <---------CCA1(2)
------>AHL20(2)                               <---------AHL20(2) --------->ARR14(2)
------AHL20(2)                               <---------AHL20(1)  --------->ZAT14
----->AHL20(2)                               --------->AHL20(1)  <---------ZAT14                 <--
-->AHL20(2)                                <---------AHL20(1)    <---------ARR14(2)             ----
--AHL20(2)                                 --------->AHL20(1)  --------->LBD16                  ----
->AHL20(2)                                --------->AHL20(2)  <---------ANAC46               <------
 
taaataaattagaaacttacaaactatattttagttctaactcaaatatatatttgactgtgtctccgtatactctatatccatgaaattagagttttac  1013500
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AGI:  At4g02300.1   
Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT4G02320.1); similar to hypothetical protein OsJ_024553 [Oryza sativa (japonica cultivar-group)] (GB:EAZ41070.1); similar to Os07g0675100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060620.1); similar to hypothetical protein OsI_026353 [Oryza sativa (indica cultivar-group)] (GB:EAZ05121.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pec
Range:  from: 1009366    to: 1013034    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.