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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ALFIN1
--------->
YAB1
<---
--------->
AHL20(2)
----
<-----------
GT1
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
----------->
GT1
--------->
CCA1(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
ARR11(3)
------>
ZmHOX2a(1)
----------->
GT1
--------->
AHL20(2)
--------->
ARR11(3)
--------------->
AGL15
--------->
AHL20(2)
--------->
AHL20(2)
-->
YAB1
--------->
AHL20(2)
<---------
TOE2(3)
<---------
AHL20(2)
<---------
AHL20(2)
--
YAB1
<---------
AHL20(2)
--------->
DAG2
--------->
YAB1
<---------
YAB1
--------->
YAB1
--
GT1
<-------
TEIL
--------->
TOE2(3)
--------->
AHL20(2)
----------->
GT1
-------
ataagatatatacatataatttccttataaattataaggtggaacgtatagaattaaaatgtagtttattatgttgaaatagataattaaaatgtataat
324700
--------->
AHL20(1)
<---------
AHL20(1)
XXXXXXXXXXXXXXXXXXXX>
MIR857
<---------
ICU4
-------->
ATHB1
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
<---------
ICU4
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(1)
<---------
YAB1
<---
--------->
ATHB12
<---------
AHL20(2)
<---
----------->
GT1
<---------
YAB1
<---------
AHL20(2)
<XXXXXXXXXXXXXXXXXXXX
MIR407
--------->
AHL20(2)
--------->
AHL20(2)
------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(2)
--
----->
AHL20(2)
--------->
AHL20(2)
--------->
ICU4
<---------
AHL20(2)
--------->
AHL20(2)
--
-->
YAB1
<---------
YAB1
--------->
AHL20(2)
--------->
YAB1
<-----------
GT1
<----
aaaatcaaatgtgtatgattaaaatttatttaatacaaaattattaattatatattaaaaatgtatggataactatttactatttaaattttaaatatta
324800
<---------
AHL20(1)
--------->
AHL20(1)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
<--
<---------
AHL20(2)
<---------
YAB1
<--
--------->
AHL20(2)
--------->
AHL20(2)
<--------
HAHB4
<---------
ZAT6
------
TOE2(3)
--------->
AHL20(2)
--------->
ZAT2
<---------
ICU4
<---------
AHL20(2)
<---
------
TOE1(3)
<---------
AHL20(2)
<---------
ZAT2
--------->
ICU4
--------->
AHL20(2)
----
------->
TOE2(3)
--------->
ZAT6
--------->
At4g35610
<---------
YAB1
<---------
AHL20(2)
-----
------->
TOE1(3)
<-----------
GT1
<---------
At4g35610
--------->
YAB1
--------->
AHL20(2)
<------
-------
GT1
--------->
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
<---------
ANAC46
acgataaaaaattaaatttatattttacacttgattatttagctgggttttatttagttattcataattatatattttattaaatagttttgtgttaatg
324900
<----------
DOF2
--------->
AHL20(2)
<---------
DAG2
--------->
ANAC58
<-----------
GT1
---------->
DOF2
----------->
GT1
-------
RVE1(1)
------->
GAMYB
--------->
At4g35610
-------
CCA1(1)
--------->
MYB46(3)
<--------
P
------
ARR11(3)
--------->
ANAC58
<-------
GAMYB
<---------
AHL20(2)
------------>
CBF
----->
ARR11(3)
--------->
ANAC58
<---------
MYB46(3)
------------>
CBF
<
---->
YAB1
--------->
MYB46(3)
------------>
AtMYB77
--------->
ANAC46
------------>
CBF
--
---
TOE2(3)
--------->
ANAC46
---------->
DOF2
--------->
ANAC58
------------>
CBF
----------
atattttcgctttagccacaaccaaaaaaaaagaaagacggttgctcaagtaaataaacgtcgtaatcgccgattcaattcaattcaattcaattcaatt
325000
<-----------
GT1
<------
MYB83
<---------
ANAC55(2)
<----------
DOF2
<------
MYB46(1)
--------->
AtMYB61
----------->
GT1
<------
---------
TOE1(2)
--------->
MYB59
<-----------
GT1
<
---->
ZmHOX2a(1)
<---------
ARR11(3)
*
TSS
--------->
KAN4(2)
-
-->
CBF
--------->
MYB46(3)
<---------
HSFB2a(2)
<---------
AHL20(2)
<---------
MYB52(1)
<----------
DOF2
cctagggtcaccatcgctctatctcattctcgataagaagacattaggtatattatttctctct
gttcccgttttctctgaaatattccctttcgataca
325100
--------->
At4g35610
<---------
At4g35610
<---------
MYB52(1)
<---------
ANAC58
----------->
GT1
<---------
ANAC46
------->
TEIL
<---------
ANAC58
<---------
ARR14(2)
---------->
ID1
<---------
AHL20(2)
--------->
ARR14(2)
<---------
MYB46(3)
-
TEIL
------>
ZmHOX2a(1)
<-----------
GT1
<-----------
RAV1(1)
---------
AHL20(1)
--------->
GLK1(2)
--------->
MYB52(2)
<----------
DOF2
-------->
AHL20(1)
<-----------
ARR10
<---------
MYB52(1)
<---------
GLK1(2)
tatatatttgagtctcttcctccaaatctgaaccgtttatacctctgattccaccgcttgttgcttattcatcggaatttctgttccttttgtgccaaat
325200
<--
<--
--------->
DAG2
<---------
MYB46(3)
<---------
ANAC58
<--
---------->
DOF2
<-------
GAMYB
<---------
ANAC46
<--
--------->
ANAC58
----------->
GT1
----------->
GT1
<---
--------->
ANAC58
<---------
ANAC46
<---------
YAB1
<---------
ANAC58
<-----
gctcaagaaatcgaaaagtattgtgtaattttcgttgttgattttgaaagtttcaatcttttgtagggtgagaattgagttttatcgaacaag
atggatt
325300
<---------
TGA1a
--------->
TGA1a
--------->
ANAC58
--------->
ANAC58
--------->
O2
<---------
O2
--------->
bZIP60(2)
<---------
ZAT14
<---
--------->
ANAC46
--------->
ARR11(3)
-----
--------->
YAB1
--------->
ARR14(2)
<-----
--------->
GLK1(2)
<---------
ARR11(3)
--------->
ZAT2
-------
ANAC46
<---------
ALFIN1
<---------
ARR14(2)
--------->
ANAC58
-------
ANAC55(2)
>>>>>>>>>>
DREB1A
<-----------
HVH21
<---------
ZAT18
------
-------
ANAC58
>>>>>>>>>>
DREB2A
--------->
WOX13(1)
--------->
ZAT14
------>
ZmHOX2a(1)
-------
ANAC58
<---------
ETT(1)
------>
ZmHOX2a(2)
----------->
HVH21
-----------
--------------------
TaNAC69(2)
--------->
HSFB2a(2)
<---------
ANAC58
--------->
ANAC58
----
GLK1(1)
--------->
DEAR3(2)
<---------
HSFB2a(2)
<---------
ANAC58
--------->
ANAC46
tcgtgaacaatcttgataccgacacgtcgctatcaattctctcttgtctagatgatccatcagatattgtccgtgccagtgctgtctcacgctcctggcg
325400
<------
MYB83
--------->
YAB1
<------
MYB46(1)
------>
ZmHOX2a(1)
--------->
MYB59
<---------
ARR14(2)
<------
MYB83
---
NtERF2
--------->
ARR14(2)
<<<<<<<<<
GATA-1
<------
MYB46(1)
->
NtERF2
--------->
GLK1(2)
<-----------
GT1
<---------
AtMYB61
----
ETT(2)
<---------
GLK1(2)
<---------
AHL20(2)
------->
TEIL
<---------
MYB46(3)
--->
ETT(2)
--------->
YAB1
--------->
TOE2(3)
<-------
GAMYB
<---------
ZAT14
>
RAV1(2)
--------->
At4g35610
--------->
MYB52(2)
<-----------
RAV1(1)
<---------
ANAC46
<--
acaatttg
gtaatctcatcagaatcctcttcaatgttagttattttatctatcttcaatgtttctgttgaatcttgagtatggtgggtttgcatttgcag
325500
--------->
ATHB12
-------->
HAHB4
--------->
YAB1
--------->
ANAC55(1)
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
<---------
ANAC58
<---------
ANAC55(2)
<---------
ANAC58
<---------
YAB1
--------->
ICU4
--------->
ZAT14
--------->
GLK1(2)
<------
ZmHOX2a(2)
<---------
YAB1
<---------
ANAC46
<-----------
ARR10
--------->
ALFIN1
--------->
ANAC55(2)
<---------
ANAC55(2)
<---------
YAB1
--------->
At4g35610
<---------
AHL20(2)
-------
MYB46(3)
<---------
GLK1(2)
<---------
At4g35610
--------->
AHL20(2)
tggttaagtatagtctctccaagaatctatgcttgaagttgttccatcagctatctaatgtggatcatataattgaaacaagtaatgatagaaatggaga
325600
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AGI:
At4g00755.1
Description:
F-box family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO70395.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810)
Range:
from: 325065
to: 327008
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.