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   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                   --------->ALFIN1
                            --------->YAB1                                                      <---
                        --------->AHL20(2)                                                      ----
                <-----------GT1  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   ----------->GT1
  --------->CCA1(2)     <---------AHL20(2)                   <---------AHL20(2)     <---------AHL20(2)
 <---------ARR11(3) ------>ZmHOX2a(1)                     ----------->GT1           --------->AHL20(2)
 --------->ARR11(3)--------------->AGL15           --------->AHL20(2)              --------->AHL20(2)
-->YAB1     --------->AHL20(2)  <---------TOE2(3)  <---------AHL20(2)              <---------AHL20(2)
--YAB1      <---------AHL20(2)  --------->DAG2    --------->YAB1   <---------YAB1  --------->YAB1
--GT1  <-------TEIL--------->TOE2(3)              --------->AHL20(2)        ----------->GT1  -------
 
ataagatatatacatataatttccttataaattataaggtggaacgtatagaattaaaatgtagtttattatgttgaaatagataattaaaatgtataat  324700
                                               --------->AHL20(1)
                                               <---------AHL20(1)
                                             XXXXXXXXXXXXXXXXXXXX>MIR857
                                     <---------ICU4
                                     -------->ATHB1
                          <---------AHL20(2)<---------AHL20(2)
                      <---------AHL20(2)    --------->AHL20(2)
                      --------->AHL20(2) --------->YAB1
                     --------->AHL20(2)  <---------ICU4
                     <---------AHL20(2) <---------AHL20(2)
                     --------->AHL20(1) --------->AHL20(2)
                     <---------AHL20(1)<---------YAB1                                           <---
            --------->ATHB12        <---------AHL20(2)                                          <---
            ----------->GT1         <---------YAB1                                     <---------AHL20(2)
   <XXXXXXXXXXXXXXXXXXXXMIR407      --------->AHL20(2)                                 --------->AHL20(2)
------AHL20(2)  <---------AHL20(2)  --------->AHL20(1)                          <---------AHL20(2)--
----->AHL20(2)  --------->AHL20(2)  --------->ICU4  <---------AHL20(2)          --------->AHL20(2)--
-->YAB1    <---------YAB1--------->AHL20(2) --------->YAB1               <-----------GT1       <----
 
aaaatcaaatgtgtatgattaaaatttatttaatacaaaattattaattatatattaaaaatgtatggataactatttactatttaaattttaaatatta  324800
                                                                        <---------AHL20(1)
                                                                        --------->AHL20(1)
         <---------AHL20(2)                                             <---------AHL20(2)
         <---------AHL20(1)                                        <---------AHL20(1)
         --------->AHL20(2)                                        --------->AHL20(1)
         --------->AHL20(1)                                     --------->AHL20(2)
        --------->AHL20(2)                                      --------->YAB1
        <---------AHL20(2)                                      <---------AHL20(2)               <--
    <---------AHL20(2)                                         <---------YAB1                    <--
    --------->AHL20(2)         --------->AHL20(2)            <--------HAHB4             <---------ZAT6
------TOE2(3) --------->AHL20(2)     --------->ZAT2          <---------ICU4  <---------AHL20(2) <---
------TOE1(3) <---------AHL20(2)     <---------ZAT2         --------->ICU4  --------->AHL20(2)  ----
------->TOE2(3)        --------->ZAT6--------->At4g35610    <---------YAB1  <---------AHL20(2) -----
------->TOE1(3)      <-----------GT1 <---------At4g35610  --------->YAB1--------->AHL20(2)   <------
-------GT1  --------->AHL20(2)<---------YAB1      <---------AHL20(2)<---------AHL20(2)<---------ANAC46
 
acgataaaaaattaaatttatattttacacttgattatttagctgggttttatttagttattcataattatatattttattaaatagttttgtgttaatg  324900
      <----------DOF2                         --------->AHL20(2)
      <---------DAG2                        --------->ANAC58
 <-----------GT1         ---------->DOF2    ----------->GT1
-------RVE1(1)    ------->GAMYB        --------->At4g35610
-------CCA1(1)   --------->MYB46(3)  <--------P
------ARR11(3)  --------->ANAC58    <-------GAMYB <---------AHL20(2)                 ------------>CBF
----->ARR11(3)  --------->ANAC58   <---------MYB46(3)                           ------------>CBF   <
---->YAB1     --------->MYB46(3)------------>AtMYB77  --------->ANAC46     ------------>CBF       --
---TOE2(3)  --------->ANAC46 ---------->DOF2--------->ANAC58          ------------>CBF    ----------
 
atattttcgctttagccacaaccaaaaaaaaagaaagacggttgctcaagtaaataaacgtcgtaatcgccgattcaattcaattcaattcaattcaatt  325000
                                                    <-----------GT1
                                          <------MYB83
                                          <---------ANAC55(2)
             <----------DOF2              <------MYB46(1)
       --------->AtMYB61                  ----------->GT1                                    <------
---------TOE1(2)                         --------->MYB59                          <-----------GT1  <
---->ZmHOX2a(1)                     <---------ARR11(3)          *TSS            --------->KAN4(2)  -
-->CBF--------->MYB46(3) <---------HSFB2a(2)    <---------AHL20(2) <---------MYB52(1) <----------DOF2
 
cctagggtcaccatcgctctatctcattctcgataagaagacattaggtatattatttctctctgttcccgttttctctgaaatattccctttcgataca  325100
                                                                   --------->At4g35610
                                                                   <---------At4g35610
                               <---------MYB52(1)          <---------ANAC58
                             ----------->GT1               <---------ANAC46
                           ------->TEIL                    <---------ANAC58
                     <---------ARR14(2)                 ---------->ID1
<---------AHL20(2)   --------->ARR14(2)               <---------MYB46(3)
-TEIL           ------>ZmHOX2a(1)  <-----------GT1    <-----------RAV1(1)
---------AHL20(1)    --------->GLK1(2)                --------->MYB52(2)           <----------DOF2
-------->AHL20(1)    <-----------ARR10              <---------MYB52(1) <---------GLK1(2)
 
tatatatttgagtctcttcctccaaatctgaaccgtttatacctctgattccaccgcttgttgcttattcatcggaatttctgttccttttgtgccaaat  325200
                                                                                                 <--
                                                                                                 <--
           --------->DAG2      <---------MYB46(3)             <---------ANAC58                   <--
          ---------->DOF2    <-------GAMYB                    <---------ANAC46                   <--
 --------->ANAC58  ----------->GT1                            ----------->GT1                   <---
 --------->ANAC58<---------ANAC46       <---------YAB1        <---------ANAC58                <-----
 
gctcaagaaatcgaaaagtattgtgtaattttcgttgttgattttgaaagtttcaatcttttgtagggtgagaattgagttttatcgaacaagatggatt  325300
                    <---------TGA1a
                    --------->TGA1a
                    --------->ANAC58
                    --------->ANAC58
                    --------->O2
                    <---------O2
                    --------->bZIP60(2)                                     <---------ZAT14     <---
                    --------->ANAC46                       --------->ARR11(3)                  -----
       --------->YAB1                                      --------->ARR14(2)                 <-----
     --------->GLK1(2)                                     <---------ARR11(3)            --------->ZAT2
-------ANAC46     <---------ALFIN1                         <---------ARR14(2)        --------->ANAC58
-------ANAC55(2)>>>>>>>>>>DREB1A                      <-----------HVH21     <---------ZAT18   ------
-------ANAC58   >>>>>>>>>>DREB2A                     --------->WOX13(1)     --------->ZAT14------>ZmHOX2a(1)
-------ANAC58  <---------ETT(1)                     ------>ZmHOX2a(2)----------->HVH21   -----------
--------------------TaNAC69(2)              --------->HSFB2a(2)    <---------ANAC58  --------->ANAC58
----GLK1(1)   --------->DEAR3(2)            <---------HSFB2a(2)    <---------ANAC58  --------->ANAC46
 
tcgtgaacaatcttgataccgacacgtcgctatcaattctctcttgtctagatgatccatcagatattgtccgtgccagtgctgtctcacgctcctggcg  325400
   <------MYB83               --------->YAB1
   <------MYB46(1)    ------>ZmHOX2a(1)
  --------->MYB59 <---------ARR14(2)                                             <------MYB83
---NtERF2         --------->ARR14(2)       <<<<<<<<<GATA-1                       <------MYB46(1)
->NtERF2          --------->GLK1(2)       <-----------GT1                   <---------AtMYB61
----ETT(2)       <---------GLK1(2)      <---------AHL20(2)        ------->TEIL  <---------MYB46(3)
--->ETT(2)    --------->YAB1  --------->TOE2(3)              <-------GAMYB <---------ZAT14
>RAV1(2)     --------->At4g35610 --------->MYB52(2)         <-----------RAV1(1)<---------ANAC46  <--
 
acaatttggtaatctcatcagaatcctcttcaatgttagttattttatctatcttcaatgtttctgttgaatcttgagtatggtgggtttgcatttgcag  325500
                                                                                  --------->ATHB12
                                                                                  -------->HAHB4
                                                                                  --------->YAB1
                                                                            --------->ANAC55(1)
                                                                            --------->ANAC46
                                                                            --------->ANAC58
                                                                            --------->ANAC58
                           <---------ANAC58                                 <---------ANAC55(2)
                           <---------ANAC58                      <---------YAB1  --------->ICU4
     --------->ZAT14--------->GLK1(2)                       <------ZmHOX2a(2)    <---------YAB1
  <---------ANAC46  <-----------ARR10                   --------->ALFIN1    --------->ANAC55(2)
  <---------ANAC55(2)    <---------YAB1      --------->At4g35610 <---------AHL20(2)
-------MYB46(3)    <---------GLK1(2)         <---------At4g35610 --------->AHL20(2)
 
tggttaagtatagtctctccaagaatctatgcttgaagttgttccatcagctatctaatgtggatcatataattgaaacaagtaatgatagaaatggaga  325600
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AGI:  At4g00755.1   
Description:  F-box family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO70395.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810)
Range:  from: 325065    to: 327008    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.