Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------AHL20(2)                                                                                       <---------AHL25(3)                                                                                       <---------AHL25(1)                                                                                       <---------AHL12(3)                                                                                       --------->AHL25(1)                                                                                      <---------AHL12(1)                                                                                      --------->AHL20(2)                                                                                      --------->AHL25(3)                                                                                    --------->GATA12                                                                             <---------YAB1<---------AHL20(2)                                                                            <---------AHL12(2)                                                                            --------->AHL12(2)                                                                           <---------AHL12(3)                                                                           --------->AHL12(1)                                                                           --------->AHL25(1)                                                                           --------->AHL12(3)                                                                           <---------AHL12(1)                                                                           <---------AHL20(2)                                                                           <---------AHL25(3)                                                                           <---------AHL25(1)                                                                           --------->AHL20(2)                                                                          <---------AHL12(1)                                                                          <---------AHL25(1)                                                                          <---------AHL20(2)                                                                          --------->AHL20(2)                                                                          <---------AHL20(1)       --------->ARR11(2)                  <---------RVE1(1)              --------->AHL20(1)       <---------ARR11(2)                 <---------RVE1(2)               --------->AHL12(1)       <---------ARR14(2)                 <---------ARR11(3)              --------->AHL25(1)       --------->ARR14(2)             <---------ANAC46                    --------->AHL25(3)      <---------GLK1(1)               ----------->GT1                     <---------AHL25(2)    <------MYB83     <---------CCA1(2)<---------ANAC58                    --------->AHL25(2) <-------    <------MYB46(1)<---------DOF5.7(1)<---------ANAC58               ------------>CBF --------->AHL12(1) -AHL20(2)       ------->TEIL <----------DOF2                      <---------PCF5   <---------RVE1(2)   gttggaaggtatctgtatgcatcttatcttcgttttagggtcgtgatattttctcaagtttttcttaggggaccaatttatttttagatttatttgattc  23146600                                   <---------ANAC55(2)                        <---------ATHB12  <----                                   --------->ANAC55(2)                <------ZmHOX2a(2)        ------                                   <---------ANAC55(1) --------->MYB52(1)   --------->WOX13(1)-------                                   <---------ANAC58  <---------MYB59 <---------ARR11(3)       -------                           <----------DOF2    <---------RVE1(2)      --------->RVE1(2)        <------                  <---------DOF5.7(2)      <---------TOE2(3)   --------->RVE1(2)             <-------               --------->WOX13(2)  <---------ANAC58 --------->ANAC55(2)   --------->WRKY18(1)<-------  <-----------GT1<---------ZAT18--------->ARR11(2)  <---------ANAC55(2) --------->WOX13(1) --------->WOX13(1) --RVE1(2)  <---------MYB52(1)  <---------ARR11(2)<-----------GT1    --------->ARR11(3) --------->TOE2(3)   tatcttacatttctcttagttcacgttgtctttgtatacgtgtttatggatattacataactgaaaatcaagatcagtcaatcagtgtaacatcaatcat  23146700                                                  --------->GLK1(2)                                                 <---------GATA12 -----YAB1                                       --------->GATA12                           --------- --->TOE2(3)    ------->TEIL            <------ZmHOX2a(1)                             --------->GATA12 -->YAB1     <---------KAN1            ----------->GT1--------->LBD16    <---------YAB5    <---------YAB1 -->YAB5     ----------->GT1      --------->CCA1(2) ----------------->AGL3            --------->RVE1(2) ---ICU4<---------ANAC46        --------->CCA1(2)<---------GLK1(2)  --------->AHL12(2)<---------ARR11(3) --ATHB12--------->LBD16        <---------KAN1  --------->At4g35610 --------->AHL12(3)--------->ARR11(3) --YAB5<---------LBD16    --------->MYB52(1)--------->RVE1(2)  <-------TEIL      --------->TOE2(3)   caataaccctgcgggatgtatataaaactaagggatatatgaggaaaatcagattccagattaagttcataaatattgattcacctaaaatctataataa  23146800                                    --------->YAB1                                <---------AHL12(1)                                --------->AHL12(1)                               <---------AHL12(2)                             --------->YAB1                     --------->AHL12(1)                     --------->YAB5 --------->YAB5        --------->RVE1(2)                     <---------AHL12(1)                  --------->CCA1(1)                     <---------AHL25(3)                  --------->RVE1(1)                    <---------AHL20(2)                 --------->AHL20(3)                    <---------AHL12(1)                 --------->AHL12(3)                    --------->AHL12(1)                 <---------AHL20(3)               ---------->DOF2                    --------->AHL25(3)      --------->RVE1(2)                         ----------->HVH21                    <---------ATHB51<---------ICU4   --------->AHL20(2)    --------->DOF5.7(1)                    --------->AHL20(2)      <-----------GT1      <------------CBF   ----------->RAV1(2)                    --------->AHL25(1)   <---------AHL12(2)     <---------KAN1<-----------HVH21                    --------->ICU4--------->ARR11(3) --------->AHL20(3)  --------->CCA1(2) >YAB1              <---------AHL25(1)<---------YAB1 <---------AHL20(3) <---------RVE1(2)     -------   catagtagttcagaagcatgaaataattctataaaaaatcatgaattatctacataaaaatatcgcatattgtagataagagtcacccctgaaagaaaaa  23146900                          --------->WOX13(1)                         --------->YAB5                        ------------>CBF                        <---------ATHB12                      --------->WOX13(1)                    <---------YAB1                    ------------>CBF               <------MYB83                                  <---------ICU4        <---------------AGL15                               *TSS                         <---------ARR11(3)        --------------->AGL15               --------->ARR11(3)                           --------->ARR11(3)       <-----------------AGL3               <---------ARR11(3)                           --------->RVE1(2)       <-----------------AG                <---------CCA1(2)--------->ICU4              --------->CCA1(1)       <-----------------AGL2    <-----------RAV1(1)   ----------->GT1   <------ZmHOX2a(1) >>>>>>>>>RAP2.2       <-----------------AGL1  ------>ZmHOX2a(1)      <---------TOE2(3)<---------TOE2(3)<---------KAN1 -->DOF5.7(1)  <------MYB46(1)--------->TOE2(2)  --------->RVE1(2)   ---------->DOF2    --------->RVE1(1)   cgatagttttctgtatttggttatcaatcaatcctatgtgggtttatatcttatctaatgtaaaaattacacaaaggatagtgtctgcaaatatctaaat  23147000                                                                    --------->YAB1                                                                    --------->YAB5                                                                    <---------ICU4                      --------->GLK1(1)                            <---------ATHB12            <---------------AGL15                                  <<<<<<<<<ARR2            --------------->AGL15                                  <<<<<<<<<ARR1           ----------------->AG                          --------->YAB1           ----------------->AGL1                        ----------->GT1           ----------------->AGL2                   --------->AHL20(2) <---------GLK1(2)            -           =======================================================MADS_MADS                      ----           ----------------->AGL3         --------->STY1(2)   --------->ZAT6             <---------ARR11(3)    <---------ANAC55(2)        <------MYB83       ===================================================    --------->ANAC55(2)        <------MYB46(1)    <---------------AGL15<---------ICU4    --------->ARR11(3)    --------->ANAC55(1)      --------->ALFIN1 <---------WOX13(2)   <---------YAB5   <-----------HVH21   gaaaacacttaattccaaaatgagaaatcaagtgggttttgcctagctaattgtataaatagtaacacaatcataatctcttcttccatcaggtcttctt  23147100                    <---------WOX13(2)                    --------->WOX13(2)                   <---------ICU4                   --------->ATHB12                   --------->ATHB51                   <--------ATHB1                   -------->HAHB4                  --------->ICU4                  <---------ATHB12                  <---------ATHB51                  <---------YAB1                --------->YAB1    <---------AHL12(3)    <---------AHL25(1)    --------->AHL12(3)    <---------AHL12(2)   --------->ARR11(3)   <---------AHL25(1)   <---------AHL20(3)   --------->AHL20(3)   <---------AHL20(2)   --------->AHL25(2)   <---------AHL25(2)   <---------ARR11(3)   --------->AHL20(2)   <---------AHL25(3)   --------->AHL25(3)   --------->AHL25(1)   <---------AHL12(1)         ---------->DOF2               ---------->DOF2   <---------AHL20(1)     --------->ANAC58               ----------->GT1   --------->AHL12(1)     --------->ANAC58              --------->DAG2                  --------->DOF5.7(1)   --------->AHL20(1)   ---------->DOF2                 --------->DOF5.7(1)           ---------->DOF2 -------->AHL20(2)<---------YAB5                   --------->HSFB2a(2)       ---------->DOF2 ----->YAB1    --------------->AGL15               <---------HSFB2a(2)   <---------ARR11(2) ==============================MADS_MADS    --------->AHL12(2)          <------ZmHOX2a(1) <---------ARR11(3)   cataatatatttcttctctaataattgaaagcaaaagaaaacagtttttttttttagaaaggtaaagaaatggaggaaacaaaggagagaaagatagtag  23147200                                                                                  --------->KAN1                                                                                --------->ANAC46   --            <---------------------WRI1                                    <--------ATHB1           --         ---------->DOF2                                                  --------->YAB1         ----       --------->ANAC58                                            <---------ARR11(2)          <-----       --------->ANAC46                                            --------->ARR11(2)  ------>ZmHOX2a(1)       --------->ANAC58                              <---------DOF5.7(1) <---------ATHB51     -------  --------->At4g35610             <-----------HVH21--------->GLK1(2)     <---------ATHB12 ------>ZmHOX2a(1)   tagcagtagacgaaagcgaagagagcatggaagctctgtcatggagtcttgacaatctttttccatatggttccaataatacactcatcctcctctacgt  23147300                                                                                <---------YAB1                                                                               <---------AHL25(2)                                                                               <---------AHL20(3)                                                                               <---------AHL25(1)                                                                               --------->AHL20(3)                                                                               --------->AHL25(2)                                                                               <---------AHL12(2)                                                                               --------->AHL20(2)                                                                              <---------ICU4                                                                              --------->YAB1                                                                             --------->ICU4                                                                             <---------YAB1                --------->KAN1                                               <---------YAB5               <---------ARR11(2)                                <-----------ARR10       <---------DOF5.7(1)             <--------P                --------->ARR11(3)      <---------DOF5.7(1)           <---------TOE2(2)            --------->RVE1(2)          <--------     <---------ALFIN1               <---------TOE1(2)            <---------ARR11(1)     <---------ZAT18 ------->ANAC58--------->ARR11(2)  <-----------RAV1(2)           <---------ARR11(3)     --------->ZAT14 ------->ANAC58--------->ZAT14 ------>NtERF2  ------>ZmHOX2a(1) <---------CCA1(2) --------->GLK1(2) ------>DOF2   --------->ARR14(2)  <------NtERF2              --------->YAB1<---------WOX13(2) ------HVH21  <---------MYB52(1)  --------->LBD16            <-------TEIL   --------->WOX13(2) -->ANAC46   <---------DOF5.7(1)  ------>NtERF2     <----------DOF2 <----------DOF2     <---------ZAT14   caagccccctcttcccgtttactcttccctcgatgccgcaggttagtcctcgttctttcacgattcatatctttccctaattataatctgttcactttag  23147400                                                       <---------ZAT2                                                       <---------At4g35610                                                  <--------P                   <---------GLK1(1)             <-------GAMYB                   --------->GLK1(1)             <-----------HVH21             <------MYB83                     <---------LBD16                           <---------YAB5             <------MYB46(1)                --------->ARR14(2)                        <---------ARR14(2)            --------->MYB59                 <---------ARR14(2)                    <-------PIF5            <---------MYB46(3)             <---------GLK1(1)                      ------->PIF5   <---------RVE1(2)                       --------->GLK1(1)                  <---------ZAT2   --------->ARR11(3)                     ----------->HVH21           --------->YAB5  <---------ARR11(2)   <---------GLK1(2)    --------->LBD16  <------ZmHOX2a(1)           <---------YAB1   --------->ARR11(2)   <---------ARR11(3)  <---------LBD16<-----------RAV1(2)<----------DOF2--------->ARR11(2) <--------- --DOF2     <---------AtMYB61      ----------->HVH21   --------->At4g35610    --------->ZAT2---------   ttatagatttttgtttggtcgatttccagggtttatagtgacaggagacccggttgcagctttgaagaagtatgaatacgagctcgtggaatcggtcatg  23147500  Previous    Next  AGI:  At3g62550.1    Description:  universal stress protein (USP) family protein. similar to ethylene-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT1G09740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40101.1); contains InterPro domain UspA; (InterPro:IPR006016); contains InterPro domain Universal stress protein (Usp) (InterPro:IPR006015); contains InterPro domain Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729) Range:  from: 23146960    to: 23148149    Orientation: Forward Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.