Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <---------YAB1<---------AHL20(2)                                                                           <---------AHL20(2)                                           <---------RVE1(1)               --------->AHL20(2)       --------->ARR14(2)                 <---------ARR11(3)              <---------AHL20(1)       <---------ARR14(2)             ----------->GT1                     <---------AHL20(2)      <---------GLK1(1)               <---------ANAC58                    --------->AHL20(1)    <------MYB83                      <---------ANAC58                    --------->AHL20(2)    <------MYB46(1)  <---------CCA1(2)<---------ANAC46               ------------>CBF  <---------AHL20(2) -AHL20(2)       ------->TEIL <----------DOF2                      <---------PCF5     --------->AHL20(2)   gttggaaggtatctgtatgcatcttatcttcgttttagggtcgtgatattttctcaagtttttcttaggggaccaatttatttttagatttatttgattc  23146600                                                     <---------MYB59                                   <---------ANAC58 <---------ANAC55(2)       <---------ATHB12  <----                                   <---------ANAC55(1)                      --------->WOX13(1) ------                                   <---------ANAC55(2)                <------ZmHOX2a(2)       -------                           <----------DOF2        <-----------GT1    <---------ARR11(3)       <------                  <---------DOF5.7(2)      <---------TOE2(3)         --------->ARR11(3) --------->TOE2(3)            <---------MYB52(1)     <---------ANAC58 --------->ANAC55(2) --------->WOX13(1) --------->WOX13(1)  <-----------GT1<---------ZAT18   --------->ANAC55(2) --------->MYB52(1) --------->WRKY18(1)<-------   tatcttacatttctcttagttcacgttgtctttgtatacgtgtttatggatattacataactgaaaatcaagatcagtcaatcagtgtaacatcaatcat  23146700       <---------LBD16                            --------->GLK1(2) -----YAB1                              <------ZmHOX2a(1)      <-------TEIL                 --------- --->TOE2(3)    ------->TEIL           ----------->GT1--------->LBD16                      <---------YAB1 -->YAB1     ----------->GT1      --------->CCA1(2) ----------------->AGL3            <---------ARR11(3) ---ICU4<---------ANAC46        --------->CCA1(2)<---------GLK1(2)                    --------->ARR11(3) --ATHB12--------->LBD16  --------->MYB52(1)    --------->At4g35610              --------->TOE2(3)   caataaccctgcgggatgtatataaaactaagggatatatgaggaaaatcagattccagattaagttcataaatattgattcacctaaaatctataataa  23146800                                    <---------ICU4                             --------->YAB1                                             ---------->DOF2                    --------->ICU4--------->ARR11(3)     --------->CCA1(1)            ----------->HVH21                    --------->AHL20(2)      <-----------GT1      <------------CBF   ----------->RAV1(2)                    <---------AHL20(2)<---------YAB1     --------->RVE1(1)    <-----------HVH21 >YAB1              <---------ATHB51--------->YAB1   --------->AHL20(2)  --------->CCA1(2)   catagtagttcagaagcatgaaataattctataaaaaatcatgaattatctacataaaaatatcgcatattgtagataagagtcacccctgaaagaaaaa  23146900                          --------->WOX13(1)                        <---------ATHB12                        ------------>CBF                      --------->WOX13(1)                    ------------>CBF                    <---------YAB1               <------MYB46(1)               <------MYB83                                  <---------ICU4        <---------------AGL15               <---------ARR11(3)        --------------->AGL15               --------->ARR11(3)                           <---------ARR11(3)       <-----------------AGL2              <---------CCA1(2)--------->ICU4               --------->ARR11(3)       <-----------------AG      <-----------RAV1(1)        *TSS     ---------->DOF2    --------->RVE1(1)       <-----------------AGL3  ------>ZmHOX2a(1)       ----------->GT1   <------ZmHOX2a(1) >>>>>>>>>RAP2.2       <-----------------AGL1 --------->TOE2(2)       <---------TOE2(3)<---------TOE2(3)--------->CCA1(1)   cgatagttttctgtatttggttatcaatcaatcctatgtgggtttatatcttatctaatgtaaaaattacacaaaggatagtgtctgcaaatatctaaat  23147000                                                                    --------->YAB1                      --------->GLK1(1)                             <---------ICU4            --------------->AGL15                                  <<<<<<<<<ARR2            <---------------AGL15                                  <---------ATHB12           ----------------->AGL3                                  <<<<<<<<<ARR1           =======================================================MADS_MADS           ----------------->AGL2                        ----------->GT1                            -           ----------------->AG                          --------->YAB1                          ----           ----------------->AGL1         --------->STY1(2)   --------->ZAT6        <-----------HVH21    <---------ANAC55(2)        <------MYB46(1)      --------->AHL20(2) <---------GLK1(2) --------->ARR11(3)    --------->ANAC55(1)        <------MYB83       <---------------AGL15<---------ICU4    <---------ARR11(3)    --------->ANAC55(2)      --------->ALFIN1     ===================================================   gaaaacacttaattccaaaatgagaaatcaagtgggttttgcctagctaattgtataaatagtaacacaatcataatctcttcttccatcaggtcttctt  23147100                   -------->HAHB4                   <---------ICU4                   --------->ATHB51                   <--------ATHB1                   --------->ATHB12                  --------->ICU4                  <---------YAB1                  <---------ATHB51                --------->YAB1   --------->AHL20(2)   <---------AHL20(1)   --------->AHL20(1)         ---------->DOF2   <---------ARR11(3)     --------->ANAC58   --------->ARR11(3)     --------->ANAC58                  ---------->DOF2   <---------AHL20(2)   ---------->DOF2                  ----------->GT1 -------->AHL20(2)<---------ATHB12                      --------->DAG2                ---------->DOF2 ----->YAB1    --------------->AGL15               --------->HSFB2a(2)       ---------->DOF2 ==============================MADS_MADS           <---------HSFB2a(2)  <------ZmHOX2a(1) <---------ARR11(3)   cataatatatttcttctctaataattgaaagcaaaagaaaacagtttttttttttagaaaggtaaagaaatggaggaaacaaaggagagaaagatagtag  23147200                                                                                                   --            <---------------------WRI1                                                 ------>ZmHOX2a(1)         ---------->DOF2                                                        --------->ANAC46   --       --------->ANAC58                                                   --------->YAB1         ----       --------->ANAC58                                                   <--------ATHB1       <-----       --------->ANAC46                                                  <---------ATHB51     -------  --------->At4g35610             <-----------HVH21--------->GLK1(2)     <---------ATHB12 ------>ZmHOX2a(1)   tagcagtagacgaaagcgaagagagcatggaagctctgtcatggagtcttgacaatctttttccatatggttccaataatacactcatcctcctctacgt  23147300                                                                                <---------YAB1                                                                               --------->AHL20(2)                                                                              <---------ICU4                                                                              --------->YAB1                                       <--------P                --------->ARR11(3)                                    <---------TOE1(2)            <---------ARR11(1)     <---------ALFIN1               <---------TOE2(2)            <---------ARR11(3)     --------->ZAT14 ------->ANAC58                    <-----------RAV1(2)           <-----------ARR10      <---------ZAT14 ------->ANAC58                    <------NtERF2              --------->YAB1 <---------YAB1 ------>DOF2   --------->ARR14(2) ------>NtERF2              <-------TEIL    --------->ICU4 <-------- ------HVH21   --------->ZAT14 ------>NtERF2  ------>ZmHOX2a(1) <---------CCA1(2) --------->GLK1(2) -->ANAC46    <---------MYB52(1)  --------->LBD16   <----------DOF2 <----------DOF2     <---------ZAT18   caagccccctcttcccgtttactcttccctcgatgccgcaggttagtcctcgttctttcacgattcatatctttccctaattataatctgttcactttag  23147400                                                       <---------ZAT2                                                       --------->At4g35610                                                  <--------P                                                 <-----------HVH21                   <---------GLK1(1)             <-------GAMYB                   --------->GLK1(1)          <---------LBD16             <------MYB46(1)                --------->ARR14(2)             <------MYB83                   <---------ARR14(2)            <---------AtMYB61              <---------GLK1(1)                               <---------            --------->MYB59                --------->GLK1(1)                      ------->PIF5   --------->ARR11(3)                     ----------->HVH21                       <-------PIF5   <---------ARR11(3)   --------->LBD16  <------ZmHOX2a(1)           <---------YAB1   <---------ARR14(2)   <---------GLK1(2)   <---------LBD16<-----------RAV1(2)<----------DOF2      <---------ZAT2 --DOF2     <---------MYB46(3)     ----------->HVH21   <---------At4g35610    --------->ZAT2---------   ttatagatttttgtttggtcgatttccagggtttatagtgacaggagacccggttgcagctttgaagaagtatgaatacgagctcgtggaatcggtcatg  23147500  Previous    Next  AGI:  At3g62550.1    Description:  universal stress protein (USP) family protein. similar to ethylene-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT1G09740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40101.1); contains InterPro domain UspA; (InterPro:IPR006016); contains InterPro domain Universal stress protein (Usp) (InterPro:IPR006015); contains InterPro domain Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729) Range:  from: 23146960    to: 23148149    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.