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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ZAT14
<---------
ICU4
<---------
ZAT18
--------->
ATHB12
--------->
ALFIN1
<---------
ATHB12
<------
ZmHOX2a(2)
--------->
ANAC58
<---------
At4g35610
<-------
TEIL
--------->
bZIP60(1)
<-----------
HVH21
--------->
SPL7
<---------
HSFC1(2)
--------->
ANAC46
<----------
DOF2
<---------
SPL7
>>>>>>>>
--------->
HSFC1(2)
--------->
ANAC58
<---------
At4g35610
<---------
ANAC58
------>
ZmHOX2a(2)
---------->
DOF2
----------->
HVH21
--------->
ANAC58
--------->
ARR14(2)
==========
--------->
ANAC58
----------->
TGA1
--------->
ANAC58
--------->
AGP1
<---------
ARR11(3)
--------->
ANAC58
--------->
GLK1(2)
--------->
ANAC46
<---------
ARR14(2)
<----------
DOF2
---------
AGL15
<---------
GLK1(2)
---------->
DOF2
--------->
At4g35610
---------------------
-
GT1
<---------
HSFB2a(1)
--------->
MYB46(3)
<---------
ZAT2
<---------
ANAC58
--------->
ARR11(3)
ttcaagaaagcttcgtccagtttctgacgcaaccattgcaacttcaagccagcttttgtcagatccaaaaccgtgcggtctgctttgtttagatcgtcca
21594000
<---------
ZAT14
--------->
ZAT14
<------
NtERF2
<---------
ORA47(2)
<---------
DEAR3(2)
--------->
ETT(1)
<---------
DEAR3(1)
--------->
ATERF1(1)
<---------
ORA47(1)
--------->
RAP2.6(3)
<---------
AHL20(2)
<-------
GAMYB
--------->
ATHB51
<---------
AHL20(2)
<-----------
HVH21
--------->
AHL20(2)
<---------
ATERF1(1)
--------------->
AGL15
<---------
DEAR3(2)
--------->
WRKY18(1)
<----------
DOF2
<---------
MYB46(3)
<------
MYB46(1)
<---------------
AGL15
<---------
DEAR3(1)
<---------
ICU4
<---------
MYB46(3)
<---------
ZAT2
<---------
ETT(2)
<------
MYB83
<---------
MYB52(1)
--------->
At4g35610
<--------
HAHB4
<---------
MYB46(3)
<---------
At4g35610
<---------
YAB1
<-----------
RAV1(1)
<---------
ZAT18
--------->
SPL7
--------->
ICU4
--------->
ANAC58
<------
MYB83
>>>>>>>>>
LFY
<---------
RAP2.6(2)
--------->
MYB59
--------->
ANAC58
<------
MYB46(1)
==============
HOX2a_HOX2a
<-----------------
AGL1
--------->
ANAC58
<---------
At4g35610
<-----
>
WRI1
------>
ZmHOX2a(1)
--------->
YAB1
--------->
ANAC58
--------->
At4g35610
------
ttgtgagctccttaggcggtcggcacagtgtcataattaggtcaagaagaacacccatgtaagcatttttgagctgttggttctttaaattgaagtccga
21594100
<---------
DAG2
--------->
WRKY18(1)
<-----------
HVH21
----------->
RAV1(2)
<----------
DOF2
-------->
P
--------->
ANAC58
<---------
HSFB2a(2)
<---------
ANAC58
----------->
GT1
----
At4g35610
<---------
O2
--------->
ANAC58
----------->
GT1
--->
At4g35610
--------->
ATHB12
<---------
ANAC58
---------->
DOF2
--------->
TOE2(3)
tgcaatgtctggatgtttttcaaagattgcattcacttggcttac
ctgtggaacaagaaaggtcaaacacttttcttaaactaaaattgaaataagagtt
21594200
--------->
TOE2(2)
------>
NtERF2
<---------
ANAC58
<---------
ETT(1)
<---------
ANAC58
----------->
HVH21
<-----------
GT1
--------->
WRKY12
--------->
DEAR3(1)
<----------
DOF2
--------->
ARR14(2)
------>
ZmHOX2a(1)
<---------
YAB1
--------->
GLK1(2)
----------->
HVH21
<---------
ARR11(3)
<---------
ARR14(2)
--------->
At4g35610
--------->
ARR11(3)
<---------
GLK1(2)
----------->
RAV1(2)
<
ttaaaatcaatatcatgctttattac
ctgtgaatcaagaatctgaaacccattgacttcaacaatttcatgagcatcttctgacgactcctccgaccatt
21594300
<---------
ARR11(3)
--------->
ARR11(3)
<-----------
ARR10
<---------
ARR14(2)
--------->
GLK1(2)
<-----------
GT1
--------->
YAB1
--------->
ARR14(2)
<-------
TEIL
--------->
ATHB12
------------>
CBF
<---------
CCA1(2)
--------->
ARR14(2)
--------->
ANAC58
--------->
TOE2(3)
--------->
At4g35610
<---------
GLK1(2)
--------->
ANAC58
--------->
ARR11(3)
<---------
At4g35610
<---------
ICU4
--------->
ANAC46
<---------
ARR11(3)
-----------
RAV1(2)
<---------
YAB1
------>
ZmHOX2a(1)
--------->
RVE1(1)
cttcagatgaagacgagtatctctgttcatcatcgctagattcactaccctctgtgttcctcgccat
tgattacgaagagaatatctcaatttcaaaact
21594400
<-----------
TBP
<---------
RVE1(1)
<---------
CCA1(1)
--------->
ARR14(2)
<---------
ARR14(2)
<---------
WRKY18(1)
--------->
WRKY38(1)
<---------
YAB1
<-----------
GT1
--------->
ICU4
<---------
ARR11(3)
<
<---------
ICU4
<------
ZmHOX2a(1)
--------->
ARR11(3)
<--
<---------
AHL20(2)
<---------
STY1(2)
<------
ZmHOX2a(1)
<--
--------->
AHL20(2)
<---------
REM1(1)
----------->
GT1
<--------
<------
ZmHOX2a(1)
<---------
MYB46(3)
--------->
WRKY45
--------->
AHL20(2)
---------
<---------
TOE2(3)
<-----------
RAV1(1)
--------->
WRKY12
<---------
AHL20(2)
--------->
YAB1
ggagatagatgtctgaggattaattaccctaagtgttgttgtagctaggaatgttgaccagagaggatatttatatttgtggagttaagagaatgatatt
21594500
<---------
AHL20(2)
--------->
YAB1
<---------
ATHB12
------------>
CBF
------>
MYB83
------>
MYB46(1)
------------>
CBF
--------->
MYB46(3)
--------->
ANAC58
<---------------
AtSPL3
--------->
ANAC58
--------------->
AtSPL8
<-
<---------
AHL20(2)
<-----------
RAV1(1)
<-
--------->
AHL20(2)
<---------
TOE2(3)
<-
----------->
GT1
--------->
AHL20(2)
<---------
YAB1
<-
------
ZmHOX2a(1)
--------->
ANAC58
<---------
AHL20(2)
--------->
YAB1
==
-------
TOE2(3)
--------->
ANAC58
--------->
AHL20(1)
--------->
TOE2(3)
----------->
RAV1(1)
-------
TOE1(3)
--------->
ANAC46
----------->
GT1
--------->
MYB46(3)
<---------------
AtSPL8
--------
-
ARR11(3)
<-----------
GT1
<---------------
AtSPL8
--------->
WOX13(1)
<---------
ATHB12
<-
>
ARR11(3)
------->
TEIL
----------->
GT1
--------->
AHL20(2)
--------->
ICU4
------------>
CBF
<-
aaggaatgcatgcattttactcgccataagttaaaaatggtaaaaaaaattaaacaaccaatcaatattaatgttgtacatccaatcgagccacatttct
21594600
<-----------
HVH21
--------->
LBD16
--------->
ALFIN1
<---------
ANAC46
------>
MYB46(1)
--------
ANAC55(1)
<---------
MYB52(2)
--------->
AtMYB61
--------
ANAC58
--------->
ANAC58
------->
GAMYB
--------
ANAC46
--------->
ANAC55(2)
--------->
MYB46(3)
--------
O2
--------->
ANAC58
------>
MYB46(1)
-------->
P
=====================================
bZIP_DOF
--------->
ANAC46
<-----------
GT1
->
ARR14(2)
<---------
At5g28300
--------->
ANAC58
--------->
WOX13(1)
--------
ANAC58
<----------
DOF2
--------->
TOE2(3)
------>
MYB83
<---------
ATHB12
--------
TGA1a
--------->
ICU4
--------->
ANAC58
--------->
MYB52(1)
------>
MYB83
gccgtgtgtcacacttacagacattagtacttttacagcaagaaacttaattcaagtaacctagcggagagtaatcaaccatccccaaaaaaactctata
21594700
<---------
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(1)
--------->
CCA1(2)
--------->
AHL20(2)
<---------
ARR11(3)
<---------
AHL20(2)
--------->
ARR11(3)
--------->
YAB1
<---------
YAB1
--------
<---------
ZAT14
--------->
ANAC46
--------->
YAB1
----------
<---------
ARR14(2)
--------->
ANAC46
------->
TEIL
<---------
TOE2(3)
caaaatgagtatacataagatataagtctatacacaaaatcaaacatagccgaattcatatgcatttataatttaatggaattcaatgtttaagaaagtg
21594800
--------->
TOE1(3)
--------->
TOE2(3)
<---------
ARR11(3)
<---------
CCA1(2)
<---------
ANAC58
<-------
TEIL
<-------
MYC3
<-------
MYC2
<-------
TEIL
--------->
ARR11(3)
--------->
AHL20(2)
------->
MYC2
<---------
WOX13(1)
------->
MYC4
--->
GT1
--------->
AHL20(2)
<---------
ANAC58
<---------------
AtSPL8
<
>
DOF2
<---------
AHL20(2)
------->
MYC3
--------->
WRKY38(1)
<---------
AHL20(2)
<-------
aaatttgatttattaaacaaaaatacatgtgcgtaaatcttaaaacgttgtccataaatgtacaagtcttcaaatttatgtgcccgtttacagctataaa
21594900
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AGI:
At3g58300.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G58330.1); contains domain PTHR10420 (PTHR10420); contains domain PTHR10420:SF29 (PTHR10420:SF29)
Range:
from: 21593741
to: 21594367
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.