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Chromosome 1
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Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(1)
<-----------
GT1
----------->
GT1
<---------
AHL20(1)
<-------
TEIL
---------->
DOF2
---------->
DOF2
--------->
MYB52(1)
<---------
AHL20(2)
------->
ANAC58
--------->
ANAC46
--------->
YAB1
<-------
GAMYB
<---------
AHL20(2)
--
------->
ANAC58
--------->
ZAT6
--------->
GLK1(2)
----------->
GT1
--------->
MYB46(3)
---
caagaaatgcattatactatcgattacactaaatgagaaagaatcagaacatcaaagggcagttaaaaaaacagaacaaacattttatatatatttttaa
20950200
--------->
bZIP60(1)
<---------
bZIP60(1)
<---------
ATHB12
--------->
ANAC46
------>
MYB83
--------->
ANAC58
------>
MYB46(1)
<----------
ID1
<---------
MYB59
<---------
ZAT14
XXXXXXXXXXXXXXXXXXXX>
MIR849
--------->
ANAC58
------
----------->
GT1
--------->
MYB46(3)
--------->
ZAT14
<------
ZmHOX2a(1)
------
--------->
ALFIN1
<-----------
GT1
--------->
ARR14(2)
<---------
ATHB12
------->
DAG2
<---------
ANAC55(2)
<---------
ARR14(2)
---------->
DOF2
--------->
At4g35610
------->
DOF2
--------->
ANAC55(2)
<---------
YAB1
<-----------
RAV1(2)
--------->
WOX13(1)
aaaagtggagaatttctaactcatgtaaccaaacattgatgtcatgaaacagtatacgacaaaaatcaggagaaatgaaagtagaatcaatcaactcaag
20950300
--------->
GLK1(2)
<---------
ANAC55(2)
<---------
GLK1(2)
<---------
ANAC46
--------->
ANAC58
---------->
DOF2
--->
ANAC58
<---------
LBD16
--------->
ANAC58
>>>>>>>>>
TBF1
--->
ANAC58
--------->
MYB52(1)
--------->
ANAC46
<---------
ZAT14
>>>>>>>>>
TBF1
<--
aaaaacacaaacaaacttac
ggataaactcaagaccaagaaacagagaatctcaagagtgaagaaggaagaaggaagaagaagaataaagacaactggtt
20950400
<----------
DOF2
<------------------------
ANAC81
--------->
ANAC46
<---------
MYB52(1)
<-----------
GT1
<-----------
HVH21
<-----
<------
NtERF2
---------->
ID1
<----------
ID1
<------
ZmHOX2a(1)
<---------
DEAR3(1)
<-----------
GT1
---------->
DOF2
----------->
GT1
------
--------
DOF2
<---------
ZAT6
<----------
DOF2
<----------
DOF2
---------->
DOF2
-------
ctttagtctatctctctctagtcttcgtcgtcgtttggcatcttttttcttttttagcttttacaaaagcgtcaaagacgacaggataaatgggcaatgc
20950500
--------->
ANAC46
---------->
DOF2
<---------
ANAC46
--------->
ANAC58
----------->
GT1
<---------
ANAC58
--------->
ANAC58
----
ZAT14
------>
ZmHOX2a(1)
<---------
ANAC58
<-----------
HVH21
--->
ZAT14
---------->
ID1
--------->
ZAT6
<----------
DOF2
--------->
TOE2(3)
-->
AtLEC2
<----------
DOF2
--------->
HSFB2a(2)
<----------
DOF2
--------->
YAB1
--
agagaagaaaaaagagacacttttgttcctctctctctctcttcttgaacactgcttgttctctctctctctttctttcacgccatcatcgttagaaaac
20950600
------->
MYC3
<-------
MYC3
<-------
MYC2
------->
MYC2
------->
PIF5
<-------
PIF5
--------->
DAG2
---------
---------->
DOF2
---------
*
TSS
------------>
CBF
---------->
DOF2
<--
--------->
ZAT18
<---------
YAB1
<---------
ANAC46
----------->
HVH21
----------->
GT1
<---------
AHL20(2)
<---------
ZAT2
--------->
DAG2
----
--------->
DAG2
<---------
YAB1
<---------
At4g35610
<---------
ALFIN1
-------->
DOF2
---------->
DOF2
--------->
YAB1
<----------
DOF2
----------->
GT1
---------
ccaaagagtg
caaaaagagaaagaagaaaacgattataatttgttgtcaatgcctggtctcgtcttttgtttgctgggatgaaaaaaagtgaccacgcgc
20950700
--------->
AtMYB61
--------->
DEAR3(1)
------->
GAMYB
<---------
MYB59
--------->
MYB46(3)
----------->
HVH21
--------->
MYB46(3)
--------->
SPL7
--------->
DEAR3(2)
----------->
HVH21
<------
NtERF2
<------
NtERF2
--------->
ATERF1(1)
------>
NtERF2
<---------
DEAR3(2)
<---------
ANAC46
--------->
DEAR3(2)
--------->
ANAC58
<---------
ATERF1(1)
--------->
ANAC46
<---------
DEAR3(1)
--------->
ANAC58
--------->
ATERF1(1)
<---------
ALFIN1
<------
NtERF2
>
ANAC58
--------->
AtMYB61
<---------
SPL7
------>
MYB83
-
>
ANAC46
<---------
ALFIN1
<-----------
HVH21
<---------
ALFIN1
---------->
ID1
-
---------
HVH21
--------->
MYB46(3)
--------->
ETT(2)
------>
MYB46(1)
<---------
GLK1(1)
<-----
------->
GT1
<-----------
GT1
<---------
ANAC58
--------->
ATERF1(1)
<---------
ZAT14
<----------
DOF2
<-
>
ANAC58
<---------
MYB46(3)
<---------
ANAC58
------>
NtERF2
<----------
DOF2
--------->
GLK1(1)
<----------
DOF2
tgttacatggtgtttgaaccacacgctctggcgcgagttgtcgtcggggcccgaccgaccctttggctccactggatttctcttctttttctctttttca
20950800
<---------
ICU4
<---------
MYB59
------>
ZmHOX2a(2)
<---------
AGP1
<---------
YAB1
--------->
ARR11(3)
--------->
ATHB51
--------->
ARR14(2)
<--------
HAHB4
<---------
ARR11(3)
--------->
YAB1
<---------
ARR14(2)
<---------
ICU4
<---------
CCA1(2)
--------->
ICU4
--------->
ALFIN1
<---------
YAB1
<---------
ANAC46
--------->
YAB1
<---------
ANAC58
--------->
MYB46(3)
-------->
ATHB12
<---------
ANAC58
-------->
P
--------->
ANAC58
-------->
ATHB51
<---------
ANAC46
<----------
DOF2
<-----------
GT1
--------->
ANAC58
------
GT1
<---------
DAG2
--------->
YAB1
------->
GAMYB
--------->
YAB1
--------
YAB1
<----------
DOF2
--------->
ICU4
--------->
MYB46(3)
--------->
TOE2(3)
--
cattattgattttgtgttttctagtttagcttttcgtgtggatctaattatgttcctttaacaaccattattatttcttctcaatcttaagcaaactatc
20950900
<---------
TOE2(3)
---------->
DOF2
--------->
YAB1
------
<---------
YAB1
<-------
TEIL
--------->
AHL20(2)
<---------
ARR11(3)
--------->
CCA1(2)
--------->
At4g35610
<-----------
GT1
------->
ANAC46
--------->
AHL20(1)
<---------
ZAT6
--------->
ANAC46
<---------
AHL20(2)
taagaaactaaactttcaaatccaatatatgataaagagttaatgtagagatacatgttatatgactctaagctacaaatactaattttttaacaaaatg
20951000
---------
<-------
TEIL
<--------
--------->
CCA1(2)
----------->
GT1
<---------
<---------
ARR14(2)
<----------
DOF2
<-------
TEIL
--------->
ARR14(2)
=====================================
HOX2a_HOX2a
--------->
GLK1(2)
------>
ZmHOX2a(1)
<------
ZmHOX2a(2)
---------->
DOF2
<---------
ATHB12
--------->
ZAT6
=================
----->
GT1
--------->
At4g35610
<---------
GLK1(1)
<-----------
GT1
--------->
AGP1
<-
tataaaaagaatcagatacaaaattcaagaaaaacagtggatatatgtgtccaatccttttacaacctgtaatactacatttttagatccattactaaaa
20951100
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AGI:
At3g56480.1
Description:
myosin heavy chain-related. similar to 3'-5'-exoribonuclease/ RNA binding [Arabidopsis thaliana] (TAIR:AT2G40820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18229.1)
Range:
from: 20947077
to: 20950610
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.