Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->AHL20(2)             --------->YAB1                                                                  --------           --------->AtLEC2     --------->TOE1(3)          --------------->AtSPL8            --------         --------->YAB1         --------->TOE2(3)          <---------------AtSPL8            <-------         <---------ICU4---------->DOF2                 --------->AHL20(2)                   ---------        <---------ATHB12  --------->YAB1          <---------AHL20(2)                 ---------->DOF2      --------->YAB1--------->YAB1               --------->AHL20(2)     <----------DOF2<---------TOE2(3) ---MYB.PH3(2)  --------->AHL20(2)  <-----------GT1    <---------AHL20(2)           <---------AHL20(2)   aaaatgaataatcatgcataaattataaagataacattaaaccattttccattttatataatttgtacaaataacttttaagttatataaaggaattatt  19843100                                                         <---------DAG2                                                  --------->HSFB2a(2)                                                  --------->HSFC1(1)                                                  <---------HSFB2a(2)                                             <---------ARR11(3)       <---------ANAC58                      --------->ARR11(3)     <---------YAB1                         <---------CCA1(2) ->AHL20(2)                              <---------AHL20(2)      --------------->AGL15            <-- ->ATHB51 <---------------ANT           --------->AHL20(2)       <---------------AGL15      <-------- --AHL20(2)                            <---------YAB1    <----------DOF2   --------->GLK1(1)--------- >ICU4 <---------ANAC58             <---------YAB1<---------HSFC1(1)---------->DOF2       <----------   tagaaatatgcttgggtaattgtgttctcttctaatttcttattatatatctctagaaactttttttctcaaaagagatttctaaactgatattacatat  19843200                                                                                   <---------YAB1                                                                                 <---------ICU4                                                                                 --------->YAB1                                                                                 <--------HAHB4                                                                                <---------YAB1                                                                             --------->ICU4                                                                          <---------AHL20(2)                                                                      <---------AHL20(2) -------AHL20(2)                                                      <---------ICU4    <---------AHL20(2) -ANAC55(2)                                                        <---------AHL20(2)  --------->AHL20(2) >ANAC55(2)           ----------->GT1                             --------->AHL20(2)--------->YAB1  - -GT1           <-----------RAV1(1)                            ----------->GT1<---------ICU4---------   tttttttttagtttttttttgttgttgtaaattttagacatctatttttagacatctatattaaacgattaaatatttcattatcattataaaatcataa  19843300                                                                              --------->ARR11(3)                                                                           --------->AHL20(2)                                                                           <---------AHL20(2)                              <---------DAG2                <---------MYB52(1)<---------ARR11(3)           <---------AHL20(2) <----------DOF2       <-----------GT1    <---------AHL20(2) ------>TEIL           --------->AHL20(1)    <---------AHL20(2)       <---------AHL20(2)          --- >YAB1    --------->YAB1<-----------GT1      --------->AHL20(2)       --------->AHL20(2)    ---------   tgtatttatgtataaaaattcaaaatatactactttttgtttaaaattttaatattacttctgtttggcaaattaaataaaatctttcgaatagttgaca  19843400                                                    =============================HOX2a_HOX2a                                                    ------>ZmHOX2a(2)                      --------->ANAC55(2)                                                    ==========================HOX2a_HOX2a  <---------ANAC55(2)                                                  <---------ARR14(2)                       --------->ANAC46                                      <---------WRKY12                                <---------ICU4                                      <---------WRKY45         <----------DOF2       <---------ATHB12                                      <---------WRKY38(1)  ---------->ID1        --------->ANAC46                              ---------->DOF2     --------->GLK1(2)           --------->ARR14(2)                             --------->AtMYB61    --------->ARR14(2)          <---------ARR14(2)                ----------->TBP      --------->WRKY18(1) <---------MYB46(3)--------->TOE2(1)   ------   --------->AHL20(2)      >>>>>>>>>MYB2          *TSS   --------->MYB52(2)--------->TOE1(1)   <----- -------->GT1   <---------AHL20(2)  <--------ZAP1<------ZmHOX2a(1)     ------>ZmHOX2a(1)   --------->ANAC58 -->HVH21       --------->AHL20(2)  <-----------HVH21  <---------MYB52(1) ------>ZmHOX2a(1)--------->ANAC58   tagtataaattagagaatataaataagaaaaccaaagcggtcaacacaagaggatcggtttgttcctttcttcctcctcgtatacgaatcaatacgcatt  19843500                                        <---------ALFIN1                                     <---------ALFIN1                                   ------->GAMYB==================================HOX2a_HOX2a                                  --------->MYB46(3)                                ----------->RAV1(1)                             --------->CCA1(2)  ------>ZmHOX2a(2)                             ======================HOX2a_HOX2a                             <------ZmHOX2a(2) --------->At4g35610                       --------->TOE2(3)                            --------->AGP1----------->RAV1(2)                     --------->YAB1                            <---------ARR14(2)--------->ARR14(2)               --------->WOX13(1)                            --------->ARR14(2)<---------ARR11(3)            <-----------HVH21      >>                            <---------ARR11(3)<---------ARR14(2)           ------>ZmHOX2a(1)   ------ --->GLK1(1)               --------->GLK1(1)------>ZmHOX2a(1)            ----------->RAV1(2)   ------ ----CCA1(2)   ---------->DOF2  ======================RAV           <---------GLK1(2)<---------GLK1(1)   tctccaactccatagccaaaagctcgacgagatccaacagcacctcctgatctgcatcgttttcaacttagcttctcctgtcaatcgaaatccctaatta  19843600                                                                        <---------HSFB2a(1)                                                                        <----------TaMYB80                                                              <---------GLK1(2)                                                             <---------At4g35610                                                          <---------MYB52(1)                                                         <-----------TGA1                                                         <-----------HVH21         --------->ARR14(2)                             <---------ANAC55(2)      ------>ZmHOX2a(2)                   <-----------HVH21  --------->At4g35610   --------->ATHB12                      <---------bZIP60(1) <---------ZAT2  <---------LBD16 >>>>>>>EIN3              <---------HSFB2a(2)--------->WOX13(1)<----------DOF2        ------>ZmHOX2a(1) --->YAB1<---------ARR14(2)       --------->GLK1(2)     <---------ANAC58--------->GLK1(1) --->AHL20(2)  <---------ATHB12  <---------GLK1(2)      <---------ANAC58<---------GLK1(1)   tacattgatcggattcaatcgagcgattcgagagagaatcgcgatgtcaatccaaattccgtcagcttcttgggattttcgcggtttcctactctgtttc  19843700                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                           <-------PIF5                                                                                           <-------MYC2                                                                                           ------->PIF5                                                                                           ------->MYC3                  ----------->GT1                                                          <-------MYC3                <-----------RAV1(2)                                                <-----------RAV1(1)       <---------ZAT2   <---------ICU4   <------ZmHOX2a(1)      <-----------------AGL1  <---------ANAC58       --------->ZAT2  --------->ICU4  <---------TOE2(3)        ----------------->AGL1  <---------ANAC58       <---------At4g35610       <---------GLK1(1)              <-----------------AG    <---------ANAC46       --------->At4g35610       --------->GLK1(1)        <-------TEIL    ---------->DOF2  ------->MYC2   atcttcttcagctcgttaccaggtaaatatcacagaattctgaggatgagtgattttagtttcattttcgaattgggaaagtgttttgttgctcgtgcaa  19843800                                                                                    <---------ARR11(3)                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                    --------->ARR11(3)                   --------->ARR14(2)                                               <---------GLK1(2)        <---------ICU4--------->ATHB12                                     <-------TEIL        --------->ATHB12                                                  --------->ARR14(1)       <---------YAB1<-------TEIL                                        <---------GLK1(2)      <---------ARR11(3)                          --------->YAB1         --------->ARR11(1)      --------->ARR11(3)                   <------ZmHOX2a(1)             <---------ARR14(2)--------->ANAC46 ------>YAB1       <---------ARR14(2) --------->MYB52(1)                 --------->ARR14(2)--------->ANAC58 ------ATHB1>>>>>>>>>WRKY18       ================HOX2a_HOX2a       --------->TOE2(3)      --------->ANAC58 ----->ICU4----------->HVH21      ------>ZmHOX2a(2)               <-------TEIL    ----------->ARR10-- ------ATHB51     <------ZmHOX2a(1)  ----------->HVH21        ----------->GT1   <-------TEIL      <-- ------ATHB12     =======================HOX2a_HOX2a   --------->ZAT6  ----------->ARR10 <-----------GT1   taatagatgatcattgacgaggattcattgttttgatccctaacaggaacaatactaacacaagaagttacattagattcggttcagattttcacgactc  19843900                                                                   <---------ANAC46        --------->HSFB2a(2)                                   <---------ANAC58        <---------HSFB2a(2)                                   <---------ANAC46                <------   <------MYB83                                               ----------------->AGL1     <-----------GT1   <------MYB46(1)                                            <---------ANAC58         <---------ANAC58   <---------MYB46(3)     <----------DOF2                --------->ALFIN1              <---------ANAC58 ------->ATHB12     <---------ZAT14                      <-----------RAV1(1)      <---------ATHB12 -------YAB1        --------->ZAT14   ---------->DOF2 <---------DEAR3(1)      --------->MYB46(3)   acgattggttctcgactaagcctacagtctttttccaatgcaaaggagagaacaagacggtgttgcctgatgtgaagagaaccaatgtttcttactcttt  19844000  Previous    Next  AGI:  At3g53490.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G02720.1); similar to Os03g0282800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049748.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN64501.1); similar to hypothetical protein OsI_010747 [Oryza sativa (indica cultivar-group)] (GB:EAY89514.1); contains domain Pili subunits (SSF54523) Range:  from: 19843450    to: 19845051    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.