Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               ----------->GT1                                                             <---------MYB46(3)                                                           <------NtERF2                                                           --------->ATERF1(1)                                                          <---------ATERF1(1)                                                         --------->ALFIN1                                                         <---------DEAR3(1)                                                     <---------LBD16                                             --------->ZAT14 <---------DEAR3(2)                                             <---------ZAT14<---------DEAR3(1)                                             --------->REM1(2)<-------GAMYB                       <--                                          ----------------->AGL1                <---------At4g35610                                     <------ZmHOX2a(1) <------NtERF2         ---------->DOF2      ---           --------->DAG2        --------->TOE1(2)  --------->ALFIN1     <---------ANAC46    --------         ---------->DOF2         --------->TOE2(2) <-----------HVH21    <-------TEIL --------->ZAT2 --------->CCA1(2)           ----------->HVH21   <---------AtMYB61---------->DOF2    <---------ZAT2<-   gagatagaagggaaaggggaagttggaacccctaacataggactccctgtagaggtcgggaggcggttcaaagctacgttgaagcagagctcgagggctc  19469500                                                                                             <-------                                                                                             <-------                                                                                             --------                                                        <---------ZAT2                    -----------                                                        <---------At4g35610              <-----------HVH21                          <----------ARF1               --------->At4g35610             <XXXXXXXXXXXX                          <----------ID1                --------->ZAT2                  --------->ALFIN1 -------ZAT14<---------ANAC46                         <---------PCF2                 <---------AtMYB61 ------>ZAT14<---------ANAC58                      --------->ALFIN1          <-------TEIL<XXXXXXXXXXX ->ZAT18     <---------ANAC58                     --------->LBD16         --------->STY1(2)  ======== --------AtLEC2<---------ZAT6                     <-----------HVH21       <---------STY1(2)  --------   tgcattgaagagggtgagtgtgagattggagacaagctgttctaagtaaacccgtgggagcagagagcatggtgctagctacatggagaggtgtgacctg  19469600                                                                 <---------ANAC58                                                                 <---------ANAC58                                                           ----------->HVH21                                                           <---------MYB52(1)                                                           --------->ALFIN1                                                          <-----------HVH21                                                         <---------O2                                                         <---------TGA1a                                                         --------->O2                                                         --------->TGA1a                                                         <---------ANAC46               --------->ZAT2                                                       ------>NtERF2                    <---------At4g35610                                                      =============MYC_MYB              <---------ZAT2      ------>ZmHOX2a(1)      <---------ANAC58        --------->MYB46(3)               <---------ALFIN1  --------->ARR14(2)         <---------ANAC46       <---------ATERF1(1)          ------>NtERF2  <---------ARR14(2)         <---------ANAC58      --------->ARR14(2)            <---------ATERF1(1) --TGA1a              ------->GAMYB              <---------At4g35610             <---------At4g35610 --At4g35610          =============================================MYC_MYB    --------->REM1(2) --->RAV1(2)        -------->P                   --------->At4g35610          --------->SPL7 >HVH21             ------>MYB83          ------->MYC3--------->ANAC46        --------->ZAT14 XXXXXXXXMIR398A    ------>MYB46(1)       <-------MYC3------->GAMYB           <---------ZAT14     <-- XXXXXXXXXMIR398B/C ===============================================MYC_MYB   --------->ALFIN1   <---- =============================MYC_MYB  <---------ALFIN1--------->LBD16     --------->DEAR3(1)-------- ->At4g35610     --------->MYB46(3) <-----------GT1<---------ARR14(2)   <---------ALFIN1--------->At4g35610   agcatgtcctctccgtctagccaaccccatggcttgtttcaccacgtttgcagcatccgccgtgagggcttgctccaccgtgcagcctccagctctcata  19469700                                                                   ---------->DOF2                                                               ----------->GT1                                <---------------AtSPL3         --------->YAB1                                <---------------AtSPL8        <---------TOE2(3)<-----------ARR10 --------ID1              --------->ALFIN1                <----------DOF2      --------->GLK1(2) -----ICU4         --------->ZAT6                       --------->At4g35610    --------->ARR11(3) ->YAB1       --------->YAB1<------NtERF2               --------->ZAT18       <---------GLK1(2)    --   gtgacaaaacaccctaaaataacacaaggtggggatagtactaatactcagaagtgagagctctatggtaaaagcttcaagaatcttggcttcattccat  19469800                                                           <------MYB83                              --------->HSFC1(2)           <------MYB46(1)                     <-----                     ---------->DOF2                      <---------AtMYB61                  <-------                  --------->ANAC58             ------>NtERF2    <---------PCF2       ---------->DOF2                  --------->ANAC46            <---------ANAC46 <------NtERF2   --------->TOE2(2) *TSS        ----------->RAV1(1)   <---------HSFC1(2)<------NtERF2--------->ALFIN1  --------->TOE1(2) ---- ------->ARR11(3) --------->ANAC58         --------->ANAC46<---------ZAT2      --------->TOE2(3)-----   ttatcttggacaacaaaaacacccaaagaagaagggtctaataacacggcgtctatatggaaggtggggctaagtcttaaacctaagaaaagagtaagga  19469900                                                                   <------ZmHOX2a(1) -ZmHOX2a(1)                              <----------DOF2      <------ZmHOX2a(1) --TOE2(3)                    ----------->GT1            --------->CCA1(2)                    <------ ----->CCA1(2)              ---------->DOF2             --------->AHL20(1)  <------ZmHOX2a(1) <------ ---->ARR11(3)  ---------->DOF2         ------->TEIL   --------->AHL20(2)<------ZmHOX2a(1)<----------DOF2   tatagagagagcgagagagaaagagagagagaaagaaaaatggactttggtcttcaaatatatgaggaaggagaaggaggaaaatgtgtatgcttttctt  19470000                   <---------ANAC46                     ---------->DOF2                 <---------LBD16                      <---------ZAT14                              --           <---------AHL20(2)               --------->ARR14(2)                ---------->DOF2     <--     ----------->GT1 ----------->GT1        <---------ARR14(2)        ------->MYC3              ----- ---ANAC58 --------->AHL20(2)        ---------->DOF2  --------->ZAT18 <-------MYC3          --------- ---ANAC58 <---------AHL20(1)    <---------PCF2      <---------ZAT6 ------->TEIL          ---------->DOF2   gtgagagaggcaaaaaatttggggggttttttgagggtccaaagtggattttgtagtgcaaagtggaatgcatgtgatgacaaagcagtatcaaaaggca  19470100                                                                                 <---------PCF2                   <---------ARR11(3)                                           <------MYB83          <----------DOF2                                                     --------->ALFIN1        --------->At4g35610                                             --------->At4g35610        <---------At4g35610                                             --------->ZAT2        <---------ZAT2        <----------DOF2                           <---------ZAT2 --------->GT1     <---------ARR14(2)                                <---------ZAT14 -------TOE2(3)    --------->ARR14(2)                             --------->SPL7<------MYB46(1) ----->DOF2       <---------CCA1(2)                           <---------------AtSPL3      <----------DOF2 >DAG2  --------->ZAT2   <----------DOF2             <---------TOE2(3)  <---------At4g35610       ---   aaggtaactcagctttgcccatatattcttttctttctcaaatttcacaaaaattaagatgtaatgggtactgcagctaagtgggtctctctcttttctg  19470200                                 <---------TOE2(3)                         --------->YAB1                                ---------->DOF2                           <---------AHL20(2)                               <---------AHL20(2)                      --------->AHL20(2)                               --------->AHL20(2)                     <---------AHL20(2)                          ===========================================================================                          <---------MYB59      <---------ICU4         --------->AHL20(2)                          ----------------->AGL3                  --------->AHL20(2)             ----                          --------->TOE2(3)   <---------YAB1      <---------AHL20(2)            <----                        ------->TEIL        <---------ICU4     <---------AHL20(1)            <-------         --------->ANAC55(2)------>MYB83    --------->YAB1     --------->AHL20(1)         ===========         <---------ANAC55(2)------>MYB46(1)<---------ATHB12<---------AHL20(2)             <---------- ------->DOF2      ---------->DOF2    <-------TEIL        --------->AHL20(2)              -----------   caaagtgtatcacttatttagaaaagaacctaattaaagatgcaaatcatcattcacttatataatatataaataaataatagccccaagaacattttat  19470300     <---------LBD16                                                                             ---- =====MADS_MADS          <----------DOF2                                                         <--- ------->GT1           --------------->AGL15                                                     <--- -----TOE2(3)   <-----------GT1                                                --------->MYB52(1)---- --AHL20(2)    <---------ATHB12                                     <----------DOF2        --------->ZAT6 ======================================MADS_MADS                    <---------DAG2    <----------DOF2 -----AGL15  <-----------GT1          ---------->DOF2            <---------ALFIN1 ------->GAMYB  ---- ---->AGL15 <---------AHL20(2)  <---------ALFIN1           ------->GAMYB       ----------->RAV1(1)<--   ggaaaattggggatttaatcactctccctttgtagcaccttgaagctatactactagccaactcccaacacttttttcagacaacagacttttactctag  19470400  Previous    Next  AGI:  At3g52490.1    Description:  heat shock protein-related. similar to heat shock protein-related [Arabidopsis thaliana] (TAIR:AT4G29920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15828.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83664.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62072.1); contains InterPro domain Clp, N-terminal; (InterPro:IPR004176) Range:  from: 19466677    to: 19469897    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.