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Chromosome 1
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Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
HSFB2a(1)
--------->
HSFC1(2)
--------->
HSFB2a(1)
<---------
ARR11(3)
<----------
DOF2
---------->
DOF2
------>
NtERF2
----------------->
AGL1
--------->
LBD16
<
<---------
bZIP60(1)
<---------
MYB46(3)
<-
--------->
bZIP60(1)
<-------
GAMYB
<---------
HSFC1(2)
---
-------->
DOF2
<---------
MYB52(1)
<---------
At4g35610
-----
-->
YAB1
<-------
GAMYB
<---------
MYB46(3)
--------------------->
WRI1
<----
--
ATHB12
<------
NtERF2
<-----------
RAV1(1)
<---------
GLK1(2)
------
->
ICU4
------>
NtERF2
--------->
ARR11(3)
----------->
RAV1(2)
<---------
DAG2
<---------
caaaagtgatgccaccgttgccaaagatgtcaacatcgctcatcatctgttgcagttgttccgcctttggattcttccccatcgacttcatcactttcgt
19280100
<---------
AHL20(1)
--------->
AHL20(1)
---------
GLK1(2)
--------->
YAB1
--------->
AHL20(2)
--------
At4g35610
<-------
TEIL
<---------
AHL20(2)
------>
MYB52(2)
--------->
ANAC58
--------->
AHL20(2)
---->
DOF5.7(2)
--------->
ANAC58
<---------
YAB1
-----
MYB52(1)
------->
MYC3
--------->
GLK1(2)
----------
--->
TOE2(3)
------->
TEIL
<-------
MYC3
<---------
GLK1(2)
--------->
ANAC58
-
DOF2
------>
ZmHOX2a(1)
<-----------
HVH21
<------
ZmHOX2a(2)
--------->
ANAC58
tagcttctccttcgtgatgaacc
ctgtttcacatgcatcataacatcatcaaaccgatcgattctgaataaatttgtgtatcaaatcgaacaagaaagag
19280200
<---------
ARR11(3)
--------->
ARR14(2)
<---------
ARR14(2)
<-----------
ARR10
--------->
ARR11(3)
--------->
LBD16
------>
NtERF2
--------->
ANAC46
--------->
ANAC58
--------->
RAP2.6(2)
--------->
ANAC58
------->
GAMYB
--------->
MYB46(3)
--------->
ANAC58
<---------
At4g35610
<---------
ARR11(1)
<---------
ARR14(2)
<---------
ATERF1(1)
<---------
HSFB2a(1)
<---------
AGP1
---------->
DOF2
--------->
GLK1(2)
--------->
ARR14(2)
--------->
ARR14(2)
--------->
MYB52(1)
<---------
CCA1(2)
--------->
ANAC58
<---
---------->
DOF2
<---------
GLK1(2)
----------->
GT1
--------->
At4g35610
<---------
CCA1(2)
>
DOF2
--------->
AtMYB61
<---------
ANAC46
------>
ZmHOX2a(2)
<---------
ARR14(2)
---
agagaacaaagcagac
catcggaatctttgtctatgagacagaaggcttcgtaaaactcttggatctgttcatctgtgaaagcatccgccat
atcttcga
19280300
<--
---------->
DOF2
<---------
GLK1(2)
---
---------->
DOF2
--------->
At4g35610
>>>>>>>>>
TBF1
--------->
YAB1
---
ZmHOX2a(2)
<----------
DOF2
<---------
At4g35610
<---------
YAB1
--------->
WOX13(1)
------>
YAB1
---------->
DOF2
<---------
YAB1
<---------
ZAT6
--------->
GLK1(2)
tcacaaagaaaagtcaaagtctgtctttgattcaatctgatgatcagcttctcttaatttgttagtgatgagagaagaagaagggagcatctatcacatt
19280400
<-----------
HVH21
--------->
ANAC46
<---------
WRKY38(1)
<---------
ANAC46
--------->
bZIP60(2)
<---------
WRKY12
<---------
ANAC58
-------
--------->
ZAT18
--------->
WRKY18(1)
<---------
ANAC58
<---------
ANAC58
<-------
TEIL
<-----------
HVH21
*
TSS
<---------
RVE1(1)
<---------
ZAT18
<--------
ZAP1
----------->
HVH21
--------->
MYB52(2)
-------
-------------
AtSPL8
--------->
LBD16
<---------
ICU4
--------->
TOE2(3)
<---------
ANAC58
------------>
AtSPL8
<---------
LBD16
--------->
YAB1
<---------
YAB1
<---------
AHL20(2)
taagtacacatcacctcttggctctaggctcttgcccggtcaaggtcaatactcatg
accttgcgttttcattagttgtgatattttttcttgagcacga
19280500
=================
bZIP_DOF
--------->
O2
--
--------->
TGA1a
<--
<---------
TGA1a
----
<---------
O2
<---
--------->
ANAC58
----
<---------
ANAC55(2)
<---
--------->
ANAC58
----
--------->
ANAC55(2)
<---
----------->
HVH21
<----
<-----------
HVH21
-------
--------->
bZIP60(2)
--------->
YAB1
--------->
AHL20(2)
--------->
ANAC46
<---------
YAB1
<---------
AHL20(2)
--------->
LBD16
<----------
DOF2
--------->
AHL20(2)
--------->
AHL20(1)
-->
ANAC58
<---------
YAB1
<-----------
GT1
<---------
YAB1
--------->
AHL20(2)
-->
ANAC58
<----------
DOF2
<<<<<<<<<<
GT-3b
--------->
ICU4
<---------
AHL20(2)
ttccaggtcacgcgtctttgttcaaacttatgacttcaacgcttatttttctttattttcatagttattagaaaaaatacttatagggaattaaattagg
19280600
--------->
ATHB12
<---------
ICU4
--
<---------
YAB1
<---
--------->
ICU4
<----
<---------
YAB1
<--------
---->
ZmHOX2a(2)
<---------
ICU4
----
ZmHOX2a(2)
--------->
ATHB51
----->
ARR14(2)
--------->
ATHB12
------
ARR11(3)
-------->
HAHB4
----->
ARR11(3)
--------->
SPL7
<--------
ATHB1
------
ARR14(3)
<---------
SPL7
--------->
AHL20(2)
----->
ARR14(3)
--------->
ALFIN1
---------->
DOF2
<---------
AHL20(2)
------
ARR14(2)
---------->
DOF2
--------->
AHL20(2)
<---------
ATHB51
--
ZmHOX2a(1)
---------->
DOF2
<------
ZmHOX2a(1)
--------------->
AtSPL3
--------->
ICU4
-->
MYB59
<----------
ID1
<---------
LBD16
<---------
AHL20(2)
<---------
TOE2(3)
atcttgattattgcgaaaagaaagggtggagtaatgctcgggtttgaggactcaagaattaaaagtcgtacaccaagttgcattttaagaaataattgat
19280700
--------->
MYB46(3)
<---------
CCA1(2)
------>
ZmHOX2a(1)
<---------
ANAC58
<---------
ZAT18
----------
<---------
ANAC58
--------->
ATHB51
<----------
DOF2
----->
TEIL
--------->
AHL20(2)
----------->
GT1
------
SPL7
<---------
YAB1
--------->
ZAT18
<---------
ANAC55(2)
-----
REM1(1)
<-----------
GT1
<---------
MYB52(1)
--------->
GLK1(1)
--------->
DAG2
-
WOX13(1)
<---------
TOE2(3)
<-----------
GT1
<---------
MYB59
<---------
GLK1(1)
---------->
DOF2
gtacgcgtgtctctaatgtaacccttgattttgattttccattatttagtgtcctaacaacttctgtcaagaattccattcagtaactttgaaaagttat
19280800
--------->
DAG2
---------->
DOF2
--------->
YAB1
--------->
TOE1(3)
--------->
TOE2(3)
<---------
YAB1
<---------------
AGL15
<---------
ICU4
--------------->
AGL15
<------
MYB46(1)
--------->
YAB1
----------------->
AGL3
<------
MYB83
--------->
ICU4
<---------
YAB1
--------->
ALFIN1
------>
MYB46(1)
<---------
ATHB12
<---------
ANAC58
--------->
TOE2(3)
------>
MYB83
----------->
GT1
<---------
ANAC58
<---------
ARR11(3)
<-----------
GT1
--------->
DAG2
<---------
ANAC46
--------->
ARR11(3)
--------->
AHL20(2)
---------->
DOF2
-------
->
GT1
<-----------
GT1
<---------
CCA1(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
MYB52(1)
atgtcttgttaccataaaaagcgaaacatatcttagaagtgggttttttttaataccaaatgggatttaaaaggtaatcaatatgaaaaaaacggactga
19280900
--------->
CCA1(2)
--------->
AtLEC2
--------->
ANAC58
<---------
YAB1
<-
<-----------
GT1
--------->
ANAC58
<---------
ANAC46
<--------
---->
HVH21
---------->
DOF2
--------->
ARR11(3)
------>
ZmHOX2a(1)
ccataaacatttttcttcttgtacaaacatgtctctccaaagcaatgcagataagagatttgttagagatgttgtgttctaattctaactcctactttta
19281000
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AGI:
At3g51920.1
Description:
CAM9 (CALMODULIN 9); calcium ion binding. Identical to Calmodulin-like protein 9 (CAM9) [Arabidopsis Thaliana] (GB:Q9S744); similar to CAM4 (CALMODULIN 4), calcium ion binding [Arabidopsis thaliana] (TAIR:AT1G66410.1); similar to CAM1 (CALMODULIN 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT5G37780.1); similar to calmodulin [Plasmodium berghei strain ANKA] (GB:XP_675328.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048)
Range:
from: 19279021
to: 19280457
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.