Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC46
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
TCP16(1)
<---------
TCP20
<---------
ARR14(2)
<-------
TEIL
--------->
ANAC58
--------->
ARR14(2)
--------->
ALFIN1
--------->
ALFIN1
--------->
ANAC58
<---------
ARR14(1)
---------->
DOF2
<---------
HSFB2a(1)
--------->
ANAC46
--------->
LBD16
--------->
HSFB2a(2)
--------->
DAG2
<----------
ID1
<---------
LBD16
--------->
LBD16
------>
ZmHOX2a(2)
-------->
ANAC58
--------->
MYB52(1)
<---------
ANAC46
=============
HOX2a_HOX2a
<---------
REM1(1)
-------->
ANAC58
<---------
ALFIN1
<---------
LBD16
------>
ZmHOX2a(1)
<---------
RAP2.6(2)
<
acaagacaatacgacaaaaacatcccaccggatccacaaaactgcgggaaagtgttgagtaatcctctgatctcagaaggtgcggtctcagagatgtaga
19118100
<------
ZmHOX2a(2)
--------->
ARR14(2)
--------->
DAG2
<---------
ARR14(2)
---------->
DOF2
<---------
At4g35610
----------------->
AGL1
----------->
HVH21
<---------
ANAC58
--------->
YAB1
----------
ID1
--------->
At4g35610
<---------
ANAC58
--------->
AtMYB61
ttgggacgagagtgacagctaaaccgatcccaaaaccatcaagaagccttgcgaaaaggagaacgtagacattgggagaccaaaacataacaatgctact
19118200
<-----------
HVH21
<----------
DOF2
------>
ZmHOX2a(1)
================================
HOX2a_HOX2a
<------
ZmHOX2a(1)
===============
HOX2a_HOX2a
<---------
YAB1
<--------
=========================
HOX2a_HOX2a
---------->
DOF2
--------->
ALFIN1
<---------
ZAT14
------>
ZmHOX2a(2)
<------
ZmHOX2a(1)
---------->
DOF2
cagaaaatagagaacagaggagagtataagcattgatcgccttcctactttgtcagagacaggaccagagaaagttgtgatcaaagtggctccaatgaga
19118300
--------->
At4g35610
<---------
At4g35610
<---------
TOE1(2)
----------->
GT1
------>
NtERF2
<----------
DOF2
<---------
TOE2(3)
------>
ZmHOX2a(1)
<---------
CCA1(2)
--------->
YAB1
--------->
At4g35610
---
------>
ZmHOX2a(1)
--------->
TOE2(3)
----------->
RAV1(2)
<---
==============
HOX2a_HOX2a
<----------
DOF2
<---------
At5g28300
--------->
TOE2(3)
-
ATHB12
<------
ZmHOX2a(2)
<----------
DOF2
--------->
GLK1(2)
<-----------
GT1
--------->
YAB1
gacattgccacgatcagtccttctatctttggttctttctccaaatgaaattctttcttaatgtaaattacagctc
ctgccaccaagaatcaacatcaaa
19118400
---------->
DOF2
<---------
ANAC58
<---------
ALFIN1
<---------
ANAC58
<-----------
HVH21
<
--------->
ARR11(3)
----------->
GT1
<------
NtERF2
----------->
RAV1(1)
------>
YAB1
--------->
TOE2(3)
---------->
DOF2
---------->
DOF2
<---------
AtMYB61
--------->
AtLEC2
------
ATHB12
<---------
MYB52(1)
---------->
DOF2
<-----------------------
TaNAC69(2)
<---------
ARR11(3)
tcatagtgagatttcgttagtatgcaaaggaaaaagaaagagaaatatagaaagagagatac
ctgcaatggtggcattgtcccagccctgcaacatattc
19118500
<---------
ICU4
<--------
ATHB1
--------->
ANAC58
<---------
ATHB51
<----------
ID1
<---------
ATHB12
--------->
ANAC58
------>
ZmHOX2a(1)
------------>
CBF
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
---------->
DOF2
<---------
ZAT18
--------->
ANAC46
--------->
At4g35610
<---------
ALFIN1
--------->
LBD16
<-------
GAMYB
--------->
At4g35610
--------->
ZAT14
<---------
At5g28300
--------->
ANAC58
<---------
At4g35610
<---------
ZAT14
<----------
DOF2
<----------
DOF2
--------->
YAB1
<------
NtERF2
--------->
ANAC58
---------->
ID1
<-----------
GT1
<---------
ATHB12
-----------
HVH21
--------->
MYB46(3)
<----------
DOF2
----------------------->
TaNAC69(2)
cctatcgcagcggctaaagcaacaagcactacactcctcat
ctttttctcttttacagtgattttactttccacgaatcaataattctgttgatagaaca
19118600
<---------
AHL20(2)
<---------
RVE1(1)
<---------
CCA1(1)
<---------
AHL20(1)
<-------
TEIL
--------->
AHL20(1)
--------->
ARR14(2)
<---------
ARR11(3)
<----------
DOF2
<---------
GLK1(2)
--------->
ARR11(3)
<---------
ANAC58
<---------
ARR14(2)
<---------
TOE2(3)
---------->
DOF2
<---------
ANAC58
<---------
TOE1(2)
---------->
DOF2
--------->
YAB1
<---------
TOE2(2)
<-----------
HVH21
----------->
GT1
--------->
WOX13(1)
<---------
TOE1(2)
------------>
CBF
<-----------
GT1
<---------
MYB46(3)
--------->
ATHB12
tcatatgtttctttcccttctgcaatgtcccagattcatttcacaaaccaaaaaaacgagttgttaaagatattttagtgattaatcaaagcatgtagca
19118700
<------
ZmHOX2a(1)
<------
MYB83
--------->
AtLEC2
<--------
P
--------->
ANAC58
----------->
HVH21
------->
GAMYB
--------->
ANAC58
----------->
GT1
--------->
MYB52(1)
--------->
WOX13(1)
--------->
DAG2
-------->
ZAP1
<-----------
GT1
<------
MYB83
---------->
DOF2
<---------
WRKY18(1)
--------->
ICU4
<------
MYB46(1)
--------->
CCA1(2)
<---------
YAB1
----------->
GT1
---------->
DOF2
--------->
ARR11(3)
----------->
GT1
--------->
GLK1(2)
--------->
ALFIN1
----------->
GT1
--------->
WRKY18(1)
<------
ZmHOX2a(1)
<-----------
GT1
<--
<---------
HSFB2a(2)
<------
MYB46(1)
<--------
P
<---------
ARR11(3)
<------------
CBF
<---------
GLK1(2)
gtttgagaagtggtaataacggtaggagagtgaaaaagagttggtcaagcagagagatataaggagaaagtgacattgttattttgaccgattcttaagt
19118800
<-----------
GT1
--------->
ANAC55(2)
<---------
ICU4
<------
ZmHOX2a(2)
<---------
ANAC55(2)
--------->
ICU4
<---------------
AGL15
<---------
AHL20(2)
----------->
GT1
----------------->
AG
--------->
AHL20(2)
--------->
DAG2
<-----------
GT1
--------
DOF2
<-----------
GT1
---------->
DOF2
--------->
MYB46(3)
<------
ZmHOX2a(1)
cttttatataatggaattacctgataaacaaaacaaaaaggaaatattacaacaactacttaaccatatgaggatcacatttcttcttaatcacacaaat
19118900
<--------
ATHB1
--------->
ATHB51
-------->
ATHB1
<---------
ICU4
--------->
ATHB12
--------->
YAB1
<---------
YAB1
--------->
ICU4
<<<<<<<<<<
AGL24
<<<<<<<<<<
AGL20
<---------
ATHB51
<---------
ATHB12
<<<<<<<<<<
AGL22
<---------
SPL7
--------->
WOX13(1)
<------
MYB83
<---------
ANAC58
--------------->
AGL15
<------
MYB46(1)
------------>
ATHB5
<---------
DEAR3(2)
<-----------
HVH21
<---------
ATHB12
<---------
GLK1(1)
<---------
ANAC58
<----------
DOF2
--------->
ICU4
<---------
At4g35610
<---------
DREB2C(2)
<----------
DOF2
<---------
At4g35610
gtctaaatacagttgagtttggaaacctctagtcggtccagagtgtcttacgcttttggacctttggtcagccaattattgcaatctttaaaatcagacc
19119000
Previous
Next
AGI:
At3g51490.1
Description:
TMT3 (TONOPLAST MONOSACCHARIDE TRANSPORTER3); carbohydrate transmembrane transporter/ nucleoside transmembrane transporter/ sugar:hydrogen ion symporter. Identical to Monosaccharide-sensing protein 3 (MSSP3) [Arabidopsis Thaliana] (GB:Q9SD00); similar to TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2), carbohydrate transmembrane transporter/ nucleoside transmembrane transporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT4G35300.1); similar to TMT1 (TONOPLAST MONOSACCHARIDE TRANSPORTER1), carbohydrate transmembrane transporter/ nucleoside transmembrane transporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT1G2
Range:
from: 19115997
to: 19118541
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.