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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---
<---
--------->
ZAT14
--------->
At5g28300
<---------
ZAT14
----------->
GT1
--------->
At4g35610
----------->
RAV1(1)
<------
ZmHOX2a(2)
<---
------>
MYB46(1)
<---------
ARR11(3)
<-----
------>
MYB83
--------->
ARR11(3)
------
-------->
P
<---------
GLK1(2)
<---------
At4g35610
--->
DOF2
<---------
ARR14(2)
----------->
RAV1(2)
>
RAV1(1)
----------->
GT1
--------->
ARR14(2)
<-----------
GT1
<--
gc
ctaccacagtaaaaatgtaaactttcttctccacaaatctatctatctaaatctaaacgctggattctcaagaagatcatttttcac
ctgagtagtgc
18957200
------
<-----
-------
<------
<------
-------
------>
ZmHOX2a(2)
--------->
ARR14(2)
<---------
ZAT6
<---------
ANAC58
<---------
At5g28300
------
ANAC58
--------->
TGA2(1)
<---------
ANAC46
--------->
ATERF1(1)
-----
------
ANAC58
<---------
TGA2(1)
<---------
TGA1a
--------->
ARR14(2)
-------
------
ANAC46
--------->
bZIP60(1)
--------->
TGA1a
--------->
GLK1(2)
<------
----
ZAT18
<---------
bZIP60(1)
<---------
O2
<---------
ARR14(2)
<-------
--->
ZAT18
<---------
ZAT14
--------->
O2
<---------
GLK1(2)
---------
-------
RAP2.6(3)
----------->
HVH21
<---------
ZAT6
<---------
ANAC58
<-----------
HVH21
--------
cgtagtgatcgagtaaaccgatgacatcagcgactaggtgactcacagtgtaagactcgtggctcggtagagaatcggagtcaccgtagcctctgagatc
18957300
------->
MYC4
------->
PIF5
------->
MYC2
<-------
PIF5
<-------
MYC3
<-------
MYC2
------->
MYC3
--------->
PIF3(3)
<---------
TGA1a
<---------
PIF3(3)
--------->
O2
<---------
ALFIN1
---------------->
PIF3(2)
<----------------
PIF3(2)
------>
NtERF2
----------->
HVH21
--------->
ANAC58
--->
CCA1(2)
--------->
ANAC58
-
ZmHOX2a(2)
<---------
ATERF1(1)
-->
ARR11(3)
<---------
TGA2(2)
---
ARR11(3)
----------->
TGA1
---
AGP1
--------->
TGA1a
----------->
HVH21
-->
AGP1
<---------
O2
--------->
At4g35610
->
ZmHOX2a(2)
------>
ZmHOX2a(2)
-->
ARR14(2)
<---------
ARR14(2)
---
ARR14(2)
--------->
ARR14(2)
---------
--
GLK1(1)
--------->
ANAC58
--------->
bZIP60(1)
--------->
LBD16
----------
-->
ARR10
<-------
MYC4
--------->
ANAC58
<---------
bZIP60(1)
<---------
LBD16
--------->
MYB52(1)
->
GLK1(1)
<---------
ICU4
<---------
AGP1
<-----------
RAV1(2)
--------->
MYB52(1)
tggagcgaccacgtggtaaccatggctagacaagaaatcgatctggtgacgccaagagtaccatgtctcagggaaaccatggagtaacagaaccaaaggc
18957400
<------
MYB83
<------
MYB46(1)
--------->
ARR14(2)
<------
MYB83
------>
MYB83
------>
ZmHOX2a(2)
<------
MYB46(1)
------>
MYB46(1)
--------->
ARR11(3)
<--------
P
<---------
At4g35610
<---------
MYB52(1)
<---------
YAB1
--------->
At4g35610
<-------
GAMYB
--------->
ICU4
--------->
ANAC46
<---------
ARR14(2)
<---------
YAB1
->
DOF2
<----------
DOF2
<-----------
GT1
<---------
ARR11(3)
<---------
ZAT2
<-----------
RAV1(1)
>
DOF2
---------->
ID1
--------->
TOE2(3)
<---------
AtMYB61
----------->
HVH21
<---------
GLK1(2)
ccttcttcgtctcctttctcagcaacgtttaaccaaatcccgttggtcttgatcttcttctctctaacagagctcgtcat
gattcttgttggtgatagtt
18957500
--------->
LBD16
<---------
ANAC46
<---------
LBD16
<------
NtERF2
--------->
ALFIN1
--------->
TGA1a
--------->
O2
<---------
bZIP60(2)
<---------
bZIP60(1)
--------->
bZIP60(1)
<---------
O2
<---------
TGA1a
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
--------->
ANAC55(2)
<---------
ANAC55(2)
<---------
TGA2(2)
----------->
TGA1
--------->
DEAR3(1)
----------->
HVH21
--------->
At4g35610
<---------
O2
<---------
At4g35610
--------->
YAB1
<---------
TGA1a
<------
ZmHOX2a(1)
<----------
DOF2
--------->
TGA1a
----------->
GT1
=========================================
bZIP_DOF
----------->
GT1
<---------
DAG2
--------->
O2
<------
NtERF2
<------
ZmHOX2a(1)
==============================================
bZIP_DOF
gtgagagagaggaggaaaatcagcgaccaaggtgaagactttatcacaagagttgagaaatggatgcacacatgacgtggcggaatatgaaatcaggcct
18957600
<------
NtERF2
--------->
DOF5.7(2)
--------->
At5g28300
<---------
ANAC46
<------
NtERF2
--------->
ALFIN1
<-------
MYC2
------->
MYC3
------->
MYC2
<-------
PIF5
-------->
ABF1
------->
MYC4
<-------
MYC4
------->
PIF5
--------->
ANAC58
<-------
MYC3
--------->
ANAC58
--------->
O2
<---------
MYB52(1)
-
--------->
ANAC46
<---------
ANAC46
--------->
ANAC58
<---------
O2
------>
ZmHOX2a(1)
<--------
P
---------->
DOF2
--------->
ANAC46
============================================
MYC_MYB
<---------
At4g35610
-----
--------->
ANAC55(2)
<-------
TEIL
<---------
RAP2.6(3)
<-------
TEIL
------
<---------
TGA1a
<---------
YAB1
<---------
ANAC58
--------->
At4g35610
<-------
*
TSS
--------->
TGA1a
--------->
ICU4
<---------
ANAC58
<-----------
HVH21
--------->
ANAC58
ct
agttagattacacgtggcggtaactggtcctgattcagtttcatgggttgccgtaagtaaaagaatgtcagccaaa
ttcatgaaacaagaaacacatg
18957700
----------->
GT1
--------->
ANAC58
--------->
ANAC55(2)
---------->
DOF2
<---------
ANAC55(2)
---------->
DOF2
--------->
CCA1(2)
--------->
ANAC58
----------->
RAV1(1)
---------->
GT1
<-----------
HVH21
<---------
ANAC58
--------->
ANAC46
---->
ATHB12
--------->
ANAC58
<---------
ANAC58
--------->
YAB1
----->
HVH21
--------->
ANAC46
----------->
RAV1(1)
--------->
ANAC58
--
ANAC55(2)
--------->
ANAC58
--------->
ARR14(2)
--------->
ZAT6
--------->
ANAC58
-------
actggatataaagaacacaaacgtcaagtaactctcagttcttcagacaacatagcgagttaactctcaagagaacatgccaaacacaacaaagaagagt
18957800
<---------
GLK1(2)
<---
---------->
DOF2
<------
--------->
ANAC58
<------
ZmHOX2a(1)
--------->
ATHB12
---------
--------->
ANAC58
==========================
HOX2a_HOX2a
<--------
--------->
ANAC58
<---------
TOE2(3)
------>
ZmHOX2a(2)
<<<<<<<<<
TBF1
---------
---->
GT1
--------->
ANAC58
<---------
YAB1
<---------
YAB1
--------->
ARR11(3)
<--------
aattctctaactcaagacaagaaaagagattgtcatttaggattatttctatgtttgatc
tcaagaagacattgatttcttcttctcttcttccagctgt
18957900
<---------
ANAC58
--------->
WOX13(1)
<---------
ANAC58
--------->
At4g35610
<---------
TOE1(2)
<---------
At4g35610
<-----------
GT1
------
REM1(1)
--------->
RAP2.6(2)
---
MYB46(3)
<---------
At4g35610
>
ZAT2
--------->
ZAT2
--------->
At4g35610
-
ZAT2
<---------
ATHB12
<---------
ZAT2
<---------
ZAT2
<---------
ANAC58
<--
>
At4g35610
<---------
At4g35610
--------->
ZAT2
<---------
ANAC58
---
-
At4g35610
<----------
DOF2
----------->
RAV1(1)
<---------
ALFIN1
------>
ZmHOX2a(1)
tgaagctcaatcagtctttcagcccatgctcggtccctagcgacagcagccatcttacgttccacttgcttaattctcttcttcctcttcgcctcttgca
18958000
--------->
GLK1(1)
--------->
ANAC46
--------->
ARR11(3)
--------->
AHL20(1)
<---------
ANAC58
<---------
ARR11(3)
---------->
DOF2
<---------
ANAC58
--------->
AHL20(2)
--------->
ZAT14
-------
ALFIN1
<<<<<<<<<
TBF1
--------->
AHL20(2)
<---------
ZAT14
------>
DEAR3(1)
--------->
AHL20(2)
<---------
YAB1
<---------
GLK1(2)
ccagcgcttgcctcttcttcttctcaga
ctgcgaaaaaaatatatacacgagaactccatcttattagtaaactaaaaaagaacattgcagattgttttg
18958100
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AGI:
At3g51000.1
Description:
epoxide hydrolase, putative. similar to epoxide hydrolase, putative [Arabidopsis thaliana] (TAIR:AT3G05600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48291.1); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073); contains InterPro domain Epoxide hydrolase-like; (InterPro:IPR000639)
Range:
from: 18956006
to: 18957602
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At3g51010.1
Description:
similar to hypothetical protein [Vitis vinifera] (GB:CAN73508.1)
Range:
from: 18957679
to: 18959138
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.