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Chromosome 1
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Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-------
MYC3
----------->
HVH21
--------->
ANAC58
--------->
ANAC46
--------->
ANAC55(1)
--------->
ANAC55(2)
----------->
GT1
--------->
O2
<---------
bZIP60(1)
--------->
bZIP60(2)
--------->
REM1(2)
------->
MYC3
<---------
ANAC58
--------->
ANAC58
<---------
ANAC58
<---------
ANAC55(2)
<---------
ANAC46
<---------
O2
---------->
DOF2
--------->
bZIP60(1)
===============================
bZIP_DOF
<---------
AHL20(2)
--------->
TGA1a
<---------
YAB1
<---------
TGA1a
<--
======================================
bZIP_DOF
----------->
RAV1(2)
<----------
DOF2
<-----------
HVH21
<---------
TOE2(3)
---
ttttaaaactatattgttaaccaagtttgaatactcgctctttattaaaagcgtgttcacatgggtcacgtaacacgtttaagaaaaacctggctctaaa
18930100
--------->
ANAC58
----------->
GT1
<---------
ANAC58
--------->
ANAC58
<---------
ANAC46
<---------
TOE1(2)
--------->
AHL20(2)
<---------
ANAC58
--------->
YAB1
<---------
TOE2(3)
<-------
TEIL
<---------
YAB1
----------->
HVH21
<----------
DOF2
<---------
ARR14(2)
<---------
YAB1
<---------
ARR14(2)
---------->
DOF2
<---------
GLK1(2)
-----
-------
AHL20(1)
--------->
ARR14(2)
--------->
AHL20(2)
--------->
ARR14(2)
------>
AHL20(1)
<---------
GLK1(2)
--------->
AHL20(2)
<----------
DOF2
<----
aatattatcaaaatcccagatttgacgaagacaagaaaataaaaaaagacttttaaaatcgttttcaaaatgggctttacagattcgtgaacagacaaaa
18930200
--------->
TGA2(2)
----------->
HVH21
<-----------
TGA1
<-----------
HVH21
--------->
ANAC46
--------->
O2
--------->
ANAC58
--------->
ANAC58
<---------
O2
<---------
ANAC55(2)
<---------
bZIP60(1)
--------->
bZIP60(2)
--------->
ANAC55(2)
--------->
bZIP60(1)
<---------
TGA1a
====================
bZIP_DOF
<<<<<<<<<<
HY5
<---------
bZIP60(2)
--------->
ANAC55(1)
--------->
KAN4(2)
--------->
TGA1a
<---------
ANAC58
<---------
bZIP60(1)
--
<-----------
STF1
<---------
ANAC46
--------->
bZIP60(1)
--
<-----------
bZIP911(1)
--------->
ARR14(2)
<-
<-----------
bZIP910(1)
<---------
ARR14(2)
------>
ZmHOX2a(2)
<----------
DOF2
<---------
ANAC58
--------->
PCF2
<------
ZmHOX2a(2)
<---------
DAG2
<---------
O2
----------->
HVH21
<---------
ARR14(2)
=====================
bZIP_DOF
<---------
KAN4(1)
--------->
ARR14(2)
----------->
GT1
--------->
ANAC46
----------->
TGA1
<---------
HSFB2a(2)
<---------
ARR11(3)
---->
DAG2
<---------
ANAC58
----------->
HVH21
--------->
HSFB2a(2)
--------->
ARR11(3)
--------
ATHB5
<---------
ANAC58
<----------
DOF2
--------->
KAN4(1)
<---------
ALFIN1
<-
attgggccatgggttaatttgctttttaggccacgtcaccgttttagtgacgtttctgaatattcgagatgtgaccccacttaaacaagatcccttggac
18930300
--------->
At5g28300
<----------
DOF2
------>
ZmHOX2a(1)
<---------
RAP2.6(3)
--------->
ORA47(1)
------>
NtERF2
------>
MYB83
--------->
RAP2.3(3)
--------->
ANAC58
--------->
DEAR3(1)
--------->
ANAC55(2)
--------->
RRTF1(3)
--------->
ZAT14
--------->
RAP2.3(2)
--------->
bZIP60(2)
--------->
DEAR4(2)
--------->
ANAC46
<-----------
GT1
--------->
ATERF1(1)
-
<---------
DEAR3(2)
-------->
P
--------->
AHL20(2)
<------
NtERF2
<-
------->
bZIP60(1)
--------->
ANAC46
<---------
AHL20(2)
--------->
RAP2.3(1)
----
------->
O2
<---------
ALFIN1
------>
MYB46(1)
--------------->
AtSPL8
--------->
ORA47(2)
<----
--------
O2
--------->
AtMYB61
--------->
DEAR3(2)
---------->
DOF2
<---------
RAP2.3(1)
<------
--------
bZIP60(1)
--------->
ANAC58
--------->
AHL20(2)
<---------
ZAT18
<---------
At5g28300
gacgtcgtttcgaccacttcacgaaaccctaccgtcgatttatttacacaaagtaccccttcattgtatagcgccgtcctttgctgtaactcttaccgtc
18930400
--------->
ARR14(2)
<---------
ARR14(2)
<-----------
GT1
--------->
AHL20(2)
<---------
CCA1(2)
<---------
AHL20(2)
----------->
ARR10
<-------
MYC3
--------->
YAB1
---------->
GT1
------->
MYC3
--------->
AHL20(2)
--------
TOE2(3)
--------->
ANAC55(2)
<----------
ID1
------>
DOF2
--------->
ANAC58
------------------------>
ANAC81
<----
-----
WRKY12
--------->
ANAC58
--------->
YAB1
*
TSS
-
-----
HVH21
<----------
DOF2
---------->
DOF2
--------->
AHL20(2)
--------->
YAB1
<------
NtERF2
----
aaaggttatatccgtctttccaaatgtctcccaaagacacgttttaaaaaaataaaaataaaacgaagaaaatcagaaaatgggtcgccaaga
atagagg
18930500
--------->
ZAT2
<---------
ZAT2
----------->
GT1
<---------
At4g35610
>>>>>>>>>
TBF1
--------->
At4g35610
------------------------>
ANAC81
---------->
DOF2
---------->
DOF2
<-------
TEIL
--------->
ANAC58
--------->
CCA1(2)
<
--------->
ANAC58
<---------
ANAC46
<<
--
ZmHOX2a(1)
--------->
MYB52(1)
<---------
LBD16
---------->
DOF2
<---
----------------------->
ANAC81
<---------
ANAC58
--------->
GLK1(1)
----------->
GT1
<---------
HSFB2a(2)
-------------------->
ANAC81
<---------
ANAC58
--------->
LBD16
----------->
GT1
--------->
HSFB2a(2)
aagaagcaaagaagaagaaaaaaaaaaaacagagcgtttcaaatatttgcggagatacaaagctgagaagagataaaaaaagccttggagaagaggtttt
18930600
<------
NtERF2
--------->
ATERF1(1)
------>
NtERF2
<---------
ATERF1(1)
--------->
RAP2.3(2)
--------->
RRTF1(3)
--------->
RAP2.3(3)
--------->
DEAR3(1)
<<<<<<<<<
TBF1
--------->
ANAC46
--------->
ATERF1(1)
<<<<<<<<<
TBF1
<<<<<<<<<
TBF1
--------->
ANAC58
--------->
RAP2.3(1)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
--------->
ANAC58
------>
NtERF2
<-------
<<<<<<<<<
TBF1
<<<<<<<<<
TBF1
<---------
CCA1(2)
--------->
LBD16
<-------
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<---------
ANAC58
<---------
ATERF1(1)
<<<<<<<<<
TBF1
<<<<<<<<<
TBF1
<---------
TOE2(3)
--------->
ANAC46
<-------
xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
------>
ZmHOX2a(1)
<-----------
GT1
--------->
DEAR3(1)
-------
<<<<<<<
TBF1
<<<<<<<<<
TBF1
------>
ZmHOX2a(1)
<---------
ANAC58
<---------
LBD16
<-------
---------------------
ANAC81
<---------
ALFIN1
<---------
ANAC46
<---------
CCA1(2)
<-------
cttcttcttcttcttcttcttcttcttcttccctcctctcctcttaacgatgtcgtatcacgcttcttcttatcttctccgccgtcgtcttacttccgta
18930700
===============================
HOX2a_HOX2a
------>
ZmHOX2a(2)
--------->
GLK1(1)
================================
HOX2a_HOX2a
<---------
GLK1(1)
--------->
ARR14(2)
--------->
ARR14(3)
<---------
ARR14(2)
--------->
REM1(2)
--------->
ALFIN1
<---------
LBD16
--------->
LBD16
<---------
ANAC58
<---------
At4g35610
--------->
At4g35610
------>
ZmHOX2a(1)
<---------
ZAT2
<---------
ARR11(3)
<------
------>
ZmHOX2a(2)
===========================
HOX2a_HOX2a
<---------
ARR14(2)
===========================
HOX2a_HOX2a
--------->
ARR11(3)
--------->
LBD16
--------->
TOE2(3)
------>
ZmHOX2a(1)
<---------
ARR14(3)
<---------
LBD16
--
ANAC58
--------->
TOE2(3)
--------->
GLK1(1)
------>
NtERF2
--
ANAC55(1)
------->
TEIL
<---------
ANAC46
--------->
ANAC58
--
ANAC55(2)
<---------
MYB52(1)
<---------
ANAC58
------>
ZmHOX2a(1)
--------->
ARR14(2)
-->
LBD16
<-------
GAMYB
--------->
ZAT2
<---------
GLK1(1)
----------->
GT1
--------->
ANAC58
--
ANAC46
<---------
At5g28300
<----------
DOF2
<------
ZmHOX2a(2)
--------->
At5g28300
--------->
DEAR3(1)
--
ANAC58
----------->
HVH21
============================
HOX2a_HOX2a
>>>>>>>>>
GT-1
--------->
ANAC46
taacctcgatctctcaccgttgaatcttcctcagctttcttccgtggagatctccttcgcgctcgag
gtaaatccttctcttacgcctccggatttgatg
18930800
------->
TEIL
<---------
AGP1
<------
MYB46(1)
<---------
YAB1
<---------
TOE2(3)
---------->
ID1
--------->
HSFC1(1)
<------
MYB83
<---------
YAB1
--------->
MYB52(2)
--------->
HSFB2a(2)
--------->
MYB111(1)
<-------
TEIL
<---------
At4g35610
<---------
MYB46(3)
<---------
HSFC1(1)
<--------
P
--------->
CCA1(2)
<----------
DOF2
----------->
GT1
<---------
MYB52(1)
--------->
ARR14(1)
<---------
DAG2
<---------
ANAC46
<-----------
GT1
<---------
GLK1(2)
<-------
TEIL
<-----
<-----------
GT1
<-------
GAMYB
<---------
HSFB2a(2)
--------->
MYB59
--------->
GLK1(2)
-------
---
TOE2(3)
<---------
MYB52(1)
<---------
LBD16
<---------
TOE1(3)
--------->
ARR11(1)
<-------
ttttcacctttctctgtttgttgtttcggtgaaatttctggaaattttcgttatggtaggtctgaatctcgagagattcgattcattttcatcggcttga
18930900
<---------
GLK1(2)
--------->
ARR14(2)
<---------
ANAC58
<---------
At4g35610
<---------
ANAC46
-----
<---------
MYB52(1)
<---------
ARR14(2)
<---------
ANAC58
<-----
<---------
ZAT6
--------->
YAB1
<----------
DOF2
<-----
----
WRKY18(1)
<---------
GLK1(2)
<---------
GLK1(2)
--------->
MYB59
---->
HVH21
--------->
HSFB2a(2)
<---------
ANAC58
<---------
TOE1(3)
---
DOF2
<---------
HSFB2a(2)
<---------
ANAC58
--------->
TOE1(2)
<---------
TOE2(3)
cctattgttagcttctagattatcagatttgtgatttgattttgctagcttctttttttcgtgcgagaattgaatcaagttttgtttaggtataccgatg
18931000
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AGI:
At3g50910.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66480.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45854.1)
Range:
from: 18930494
to: 18933219
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.