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Chromosome 1
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Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
AHL20(1)
<--------
ATHB1
------->
MYC2
<---------
AHL20(2)
<-------
PIF5
--------->
AHL20(2)
------->
PIF5
<---------
ICU4
<-------
MYC2
--------->
YAB1
<-------
MYC3
--------->
ICU4
<---------
ETT(1)
---------->
DOF2
---------->
DOF2
<---------
GLK1(1)
------
--------->
TOE2(3)
--------->
ICU4
--------->
LBD16
--------->
ANAC58
--------->
At4g35610
--------->
YAB1
<---------
LBD16
--------->
ANAC46
------->
GAMYB
--------->
AHL20(2)
--------->
HSFB2a(1)
--------->
ANAC58
---------->
DOF2
<---------
AHL20(2)
<---------
HSFB2a(1)
<---------
ALFIN1
--
MYB59
--------->
MYB52(1)
--------->
AHL20(2)
---------->
DOF2
--------->
LBD16
------->
MYC3
--
cttgattaagttgcataacagcacaacctaaggcccatttaataatttttaaaagcccaaaaggaatgtttccctgaatttccgaccacgcgcttaaaaa
18733000
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
<-------
MYC3
------->
MYC3
<---------
ANAC58
<-------
MYC2
<---------
ANAC58
------->
MYC2
<---------
ANAC46
--------->
ANAC46
--------->
ARR11(3)
--------->
LBD16
<---------
ANAC46
<-------
TEIL
<---------
ARR11(3)
--------->
LBD16
<---------
AtMYB61
--------->
ALFIN1
--------->
ANAC55(2)
---
<---------
GLK1(1)
<-----------
RAV1(1)
<----------
DOF2
<-------
GAMYB
<------
---->
DOF2
<---------
LBD16
<---------
GLK1(1)
--------->
ANAC58
--------->
ALFIN1
<------
------->
ARR11(3)
--------->
GLK1(1)
--------->
ANAC58
<-----------
RAV1(1)
<----------
DOF2
agaactcgatttccctgaattttggagatttctggtggtgtattacacgcgctataggtgcgtctgtgtgttggacacatgatatttcttttttgttcaa
18733100
<-----------
GT1
<--------
HAHB4
<-------
TEIL
<---------
ZAT18
--------->
YAB1
--------->
CCA1(2)
--------->
TOE2(3)
<---------
ICU4
<---------
ARR14(2)
--------->
ZAT6
<-----------
GT1
<---------
AHL20(2)
--------->
ARR14(2)
<---------
TOE2(3)
--------->
YAB1
----------->
TBP
---->
GAMYB
<---------
ARR11(3)
--------->
TOE1(3)
--------->
GLK1(2)
---
WRKY38(1)
--------->
ARR11(3)
--------->
MYB46(3)
--------->
TOE2(3)
<---------
GLK1(2)
---
WRKY12
--------->
GLK1(2)
--------->
ZAT18
---------->
DOF2
---------->
DOF2
<---------
YAB1
----
cgggatacatgagaatatatactaacattagttcacaacaacttgaagaaagttatcttaactacacaaagtcaaaagattctataattacaaaattaga
18733200
<---------
AHL20(2)
--------->
AHL20(2)
--------->
ATHB51
--------->
ATHB12
--
<---------
AHL20(2)
<--------
HAHB4
<---------
AHL20(2)
<---------
ICU4
--------->
AHL20(2)
--------->
ICU4
<---------
AHL20(1)
<---------------
AGL15
--
----------->
GT1
--------->
AHL20(2)
--------------->
AGL15
<---
--------->
DAG2
<---------
AHL20(2)
<-----------------
AGL2
-------
---------->
DOF2
--------->
AHL20(1)
----------------->
AGL1
<--------
-------->
CBF
<---------
AHL20(2)
---------->
DOF2
<---------
YAB1
gcaatttgaaaaagttaattcaagtatgtgtatttacttagaaataaaattatttgttaacaaagaccatttccacatagagtcatacgataattaacct
18733300
------>
ZmHOX2a(1)
------->
PIF5
<-------
PIF5
--------->
ANAC58
--------->
ANAC46
--------->
bZIP60(2)
--------->
ANAC58
------->
GAMYB
---------->
DOF2
<---------
ALFIN1
<----------
DOF2
---->
NtERF2
--------->
MYB46(3)
---------->
DOF2
------->
LBD16
------>
MYB46(1)
--------->
YAB1
------
LBD16
-------->
P
--------->
YAB1
<---------
AHL20(2)
-->
MYB46(3)
------>
MYB83
--------->
HSFB2a(2)
--------->
AHL20(2)
---
GT1
---------->
DOF2
--------->
TOE2(3)
--------->
AHL20(2)
<----------
DOF2
ccggcaagaagttaaagccaaccacgtccttaaattccttctataatatcgattagtctccatttaatcaaagctttaaagcttttctgaagaaa
atgcc
18733400
--------->
YAB1
------>
ZmHOX2a(1)
--------->
YAB1
--------->
TOE1(3)
------>
NtERF2
--------->
TOE2(3)
--------->
ANAC58
------>
ZmHOX2a(2)
--------->
bZIP60(1)
<---------
ARR14(2)
--------->
ANAC46
--------->
ARR11(3)
--------->
ANAC58
<---------
ARR11(3)
<---------
bZIP60(1)
--------->
ARR14(2)
--------->
ANAC46
<---------
GLK1(1)
<---------
At4g35610
------>
ZmHOX2a(1)
--------->
GLK1(1)
-------
--------->
ALFIN1
<-----------
HVH21
---------->
DOF2
<------
ZmHOX2a(2)
----
<---------
At4g35610
<---------
ALFIN1
<---------
YAB1
----------->
ARR10
<-------
tcttgttgagcttcttacaagtgctgctcttggattgtccctccaactccttcacgacgccatcataagagccaaggagagatccttaatcacaagatgt
18733500
--------->
ANAC58
--------->
ANAC58
<------
ZmHOX2a(2)
--------->
ANAC46
<---------
ARR11(3)
---------->
DOF2
<---------
ALFIN1
--------->
ARR11(3)
--------->
HSFB2a(2)
---->
GT1
--------->
HSFB2a(2)
<---------
YAB1
<---------
HSFB2a(2)
--->
TEIL
<---------
HSFB2a(2)
--------->
ICU4
--------->
DEAR3(1)
<----------
DOF2
--
ARR11(3)
--------->
ZAT14
<---------
YAB1
<---------
ALFIN1
------->
TEIL
atattggaccgtctcgatgctacactccataagataactccatttgtcattaagatcgataccctcaccgaagaagtcgatgaacctttcagaaaagtca
18733600
--------->
HSFB2a(2)
<---------
HSFB2a(2)
<---------
At4g35610
<---------
HSFB2a(2)
--------->
LBD16
<------
ZmHOX2a(1)
--------->
HSFB2a(2)
<---------
ANAC46
--------->
At4g35610
<---------
LBD16
<----------
DOF2
--------->
ANAC58
<---------
LBD16
--------->
LBD16
-
<---------
ARR11(3)
--------->
ANAC58
<---------
ANAC58
--------->
ANAC46
<---------
TOE2(3)
--------->
ARR11(3)
---------->
DOF2
<---------
ANAC58
<---------------------
WRI1
<
tcgaagagcttaaacgtcttctcgagaaagccattcgtctcgttgatgcttatgcggagcttaaactccgaaacttactcaggaaatatag
gtttgtgaa
18733700
---------->
DOF2
------->
GAMYB
<---------
MYB55(2)
--------->
MYB46(3)
--------->
ARR11(3)
------>
MYB83
<---------
ARR11(3)
------>
MYB46(1)
--------->
GLK1(2)
<---------
MYB111(2)
-------->
P
<--------
HAHB4
<---------
MYB46(2)
------>
MYB83
--------->
ATHB12
--------->
MYB46(3)
<---------
ARR11(3)
<---------
ICU4
<---------
MYB111(1)
--------->
ARR11(3)
--------->
YAB1
<-----------
GT1
--------->
RVE1(1)
<---------
ATHB12
--------->
AHL20(2)
--------->
CCA1(1)
<--------
<---------
MYB52(1)
<---------
ZAT6
--------->
MYB55(1)
--------->
AHL20(2)
<----------
DOF2
---------->
GT1
----------->
GT1
-------->
P
--------->
TOE2(3)
------>
MYB46(1)
---------
ANAC46
<---------
AHL20(2)
<---------
AHL20(2)
<----------
DOF2
------>
ZmHOX2a(1)
tgtcgttaatcatttccatatgtaaatgtaatgtagtgttaaattataccaaccaaagtatatactttaacaaaaaaatatcctaccaaaatcttttatt
18733800
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
AtLEC2
--------->
MYB59
--------->
ANAC58
------->
TEIL
<-------
TEIL
--------->
ANAC46
--------->
GLK1(2)
<---------
WOX13(1)
--------->
ANAC58
<---------
CCA1(2)
<---------
YAB1
-
AHL20(2)
<-----------
RAV1(1)
<----------
DOF2
--------->
GLK1(2)
<----------
DOF2
---------
tttcatgcaatttttttgttgttgttgtgaatctttctttag
gtacaagagaagaatcaaggagttggactcttctttgagatggatgatagatgtggat
18733900
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AGI:
At3g50450.1
Description:
HR1 (HOMOLOG OF RPW8 1). similar to HR3 (HOMOLOG OF RPW8 3) [Arabidopsis thaliana] (TAIR:AT3G50470.1); similar to HR3 [Arabidopsis lyrata] (GB:AAP45325.1); contains InterPro domain Disease resistance, plant (InterPro:IPR014011); contains InterPro domain Mildew-resistance, broad-spectrum (InterPro:IPR008808)
Range:
from: 18733396
to: 18734116
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.