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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
----------->
RAV1(1)
--------->
ANAC46
<---------
AHL20(2)
<----------
DOF2
<---------
AHL20(2)
<---------------
AGL15
<---------
AHL20(2)
--------->
ATHB12
--------------->
AGL15
--------->
AHL20(2)
----------->
GT1
<---------
AtLEC2
<-----------
GT1
--------->
AHL20(2)
------->
GAMYB
--
tataagttatattgtttattgtataatgcatgatttgatttgatttatcttcttttagtatgtgatatataattttatatatgcaacagaacacaatttg
18684900
<---------
ANAC58
--------->
GLK1(2)
<---------
ANAC58
<--
<---------
GLK1(2)
<-----------
RAV1(1)
---
--------->
ARR14(2)
--------->
ALFIN1
<------
ZmHOX2a(1)
--------->
KAN4(2)
<---------
ANAC46
=================
<----------
TaMYB80
<----------
DOF2
--------->
ALFIN1
---------->
DOF2
-------->
DOF2
<---------
ARR14(2)
<---------
AtMYB61
<---------
MYB46(3)
<---------
TOE2(3)
caaaagtatattctcagattctattgtctgacttttgtccatgggagagtggtgttggcttctcttatattcgttgctaagcttgataaaggattatgca
18685000
<---------
ARR14(2)
--------->
ARR14(2)
<-------
MYC3
------->
MYC3
<---------
ANAC58
<---------
TGA1a
<---------
ANAC55(2)
<---------
O2
--------->
GLK1(2)
--------->
O2
--------->
ARR11(3)
------
--------->
TGA1a
<------
ZmHOX2a(2)
<---------
YAB1
<---------
ANAC55(2)
<---------
AHL20(2)
--------->
At4g35610
--------->
AHL20(1)
<---------
ANAC46
--------->
AHL20(2)
<-----------
HVH21
<---------
ANAC58
<----------
DOF2
--------->
ANAC55(2)
<---------
WOX13(1)
<----------
DOF2
--------->
ANAC55(2)
<-----------
GT1
--------->
ANAC46
<---------
YAB1
------>
ZmHOX2a(2)
----------->
GT1
<---------
AHL20(2)
-------
ARR14(2)
--------->
ICU4
<-----------
GT1
<---------
At4g35610
<---------
AHL20(1)
------>
ARR14(2)
----------->
GT1
--------->
MYB52(1)
<---------
ARR11(3)
<---------
AHL20(2)
============
bZIP_DOF
--------->
ATHB12
--------->
GLK1(1)
<---------
ANAC46
--------->
YAB1
-
aattcacgtgaatttgcatatagtgattaattcagattaactgatctctttcagatcaaaatctttgtagcgtaacttatatatattataacttttgaaa
18685100
--------->
ICU4
<---------
ATHB51
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ZAT14
--------->
AHL20(1)
--------->
ZAT14
--------->
ANAC55(2)
--------->
AHL20(2)
<---------
REM1(1)
<---------
ANAC55(2)
---->
DOF2
<---------
ICU4
<------
ZmHOX2a(2)
--------->
ALFIN1
--------->
ANAC58
<
---------->
GT1
<------
NtERF2
---------->
DOF2
--------->
ANAC58
<---
agaagaaaaaaattatggccgaagaaacgatcgaaatagtgagaaaatagagaaagtgtagggaacgatgagggagtaagtaacacatctgtgttttgtc
18685200
------>
ZmHOX2a(2)
--------->
CCA1(2)
<------
ZmHOX2a(2)
<---------
AGP1
--------->
ARR11(3)
<---------
DOF5.7(2)
--------->
ARR14(2)
<---------
At5g28300
<---------
ARR14(2)
----------->
HVH21
<-----------
ARR10
<---------
At4g35610
--------->
AGP1
--------->
At4g35610
<---------
DAG2
<---------
ARR11(3)
----------->
RAV1(2)
<----------
DOF2
---------
WOX13(1)
<---------
CCA1(2)
--------->
MYB59
--------->
DOF5.7(2)
-
------
YAB1
--------->
ANAC46
<-----------------
AGL1
<---------
CCA1(2)
--
tgattgtctgattaagaactacacatagcagatctgtgttttgttatgggccttcactattaggcccatctgacccatatcgttaccgctttttagtatg
18685300
---
---
----
<---
----
<---
------------>
CBF
<---------
MYB52(1)
<---------
ARR11(3)
----
--------->
REM1(1)
--------->
TOE2(3)
--------->
LBD16
<---------
ANAC46
--------->
MYB46(3)
<---------
ARR14(2)
--------->
ANAC58
--------->
ARR14(2)
----------->
RAV1(1)
--------->
ARR14(2)
--------->
ANAC46
=====================
HOX2a_HOX2a
--------->
ANAC58
---------->
DOF2
<----------
DOF2
--------->
ARR11(3)
<---------
ARR14(2)
--------->
ANAC58
*
TSS
--------->
At4g35610
--------->
ANAC58
------>
ZmHOX2a(2)
<-------
TEIL
-------->
DAG2
<---------
TOE2(3)
<---------
GLK1(1)
---------->
DOF2
<------
ZmHOX2a(1)
-------->
DOF2
---------->
DOF2
--------->
TOE1(3)
<---------
LBD16
<----------
DOF2
<---------
HSFB2a(1)
gaaaagcaacaacaatgt
aaaggaaagcagaaacgttagatttctttagacgcgcaaactgaaagagctttgatcgatcgatttggaggattcgtagaag
18685400
--------->
TOE2(3)
------>
ZmHOX2a(2)
<-----------
GT1
<---------
GLK1(1)
--------->
MYB52(2)
<------
ZmHOX2a(2)
<-------
TEIL
--------->
GLK1(1)
------>
ARR14(1)
--------->
ARR11(3)
------>
CCA1(2)
<---------
ARR11(3)
<---
----->
ARR11(3)
<---------
ARR14(2)
<---------
WOX13(1)
------
ARR11(3)
--------->
ARR14(2)
--------->
ATHB12
----->
ARR14(2)
<---------
YAB1
<------
ZmHOX2a(1)
<---------
AtLEC2
------
ARR14(2)
<----------
DOF2
<---------
TOE1(3)
<---------
ANAC58
----->
ARR11(1)
<----------
DOF2
<---------
AHL20(2)
<---------
TOE2(3)
<---------
ANAC58
at
atg
gttcgttcttacctttgattctgtctttattttttttatgtttagagattagcaatttctaaggatctctagataacaattttgcatgatggatt
18685500
------>
ZmHOX2a(2)
--------->
CCA1(2)
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
ARR11(3)
--------->
ARR14(2)
<---------
WOX13(1)
----
--------->
AGP1
--------->
ATHB12
<----------
DOF2
<---------
ARR11(3)
<---------
YAB1
--------->
ANAC58
<---
<---------
ARR14(2)
--------->
ICU4
--------->
ANAC58
<---
<---------
AGP1
------------>
ATHB5
--------->
ANAC46
----
------
AHL20(2)
<---------
TOE2(3)
--------->
ARR11(3)
<---------
ZAT6
tttttttttaagatctgatttgtatttagcgaatgttagaatgaagaaattagggttccatgattgaagaagattttagacgaaaccctttagtgttaga
18685600
<---------
ICU4
<---------
YAB1
--------->
ICU4
--------->
TGA2(2)
<-----------
TGA1
<---------
TGA1a
--------->
bZIP60(2)
--------->
TGA1a
--------->
ANAC58
<---------
O2
<---------
HSFC1(1)
<---------
bZIP60(1)
<---------
HSFB2a(2)
--------->
bZIP60(1)
--------->
GLK1(2)
----------->
GT1
--------->
HSFC1(1)
--------->
O2
--------->
bZIP60(1)
--------->
ARR11(3)
<---------
ANAC46
--------->
HSFB2a(2)
--------->
ANAC58
--------->
ANAC46
<---------
ARR11(3)
--------->
ZAT14
<---------
ANAC46
<---------
TGA2(1)
----------->
ARR10
--------->
ATHB51
<---------
ARR14(2)
--------->
ANAC55(2)
----->
ZAT2
<---------
ICU4
--------->
ARR14(2)
<-----------
STF1
<---------
bZIP60(1)
------
ZAT2
--------->
ATHB12
--------->
ANAC46
<---------
ARR14(2)
<---------
WOX13(1)
------
At4g35610
--------->
ICU4
<---------
ARR14(2)
---------->
DOF2
--------->
TGA2(1)
----->
At4g35610
<---------
YAB1
--------->
ARR14(2)
=========================
bZIP_DOF
gctgagattttgaattttggatgttattattgcag
tcgagtatatacagaactgtttcgagaaaagagaaaccgagacgtcatcatggattgacgacaca
18685700
<---------
At4g35610
<----------
DOF2
<-----------
RAV1(1)
<------
ZmHOX2a(1)
<---------
TOE2(3)
<---------
TOE1(3)
--------->
HSFB2a(2)
<----------
DOF2
<---------
TOE2(3)
----------->
HVH21
<---------
YAB1
--------->
ARR11(3)
<--
--------->
ANAC58
<---------
HSFC1(2)
<---------
HSFB2a(2)
<---------
ARR11(3)
----------->
GT1
--------->
ANAC58
--------->
HSFC1(2)
<---------
MYB46(3)
---------->
DOF2
<---------
TOE2(3)
gaagaagcaagagattaaggaagcttttgagctatttgacactgatggttctggtaccattgatgctaaagagcttaatgttgctatgag
gtaatatcga
18685800
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AGI:
At3g50360.1
Description:
ATCEN2 (CENTRIN2); calcium ion binding. similar to caltractin, putative / centrin, putative [Arabidopsis thaliana] (TAIR:AT4G37010.2); similar to caltractin, putative / centrin, putative [Arabidopsis thaliana] (TAIR:AT4G37010.1); similar to Caltractin (Centrin) (GB:P41210); contains InterPro domain Flagellar calcium-binding protein (calflagin); (InterPro:IPR003299); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048)
Range:
from: 18685319
to: 18686694
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.