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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ARR11(3)
--------->
WRKY45
--------->
At4g35610
--------->
ARR14(2)
-
<---------
ARR14(2)
<---------
ARR14(2)
------>
ZmHOX2a(1)
-
--------->
GLK1(2)
--------->
WRKY38(1)
<---------
ANAC58
-
--------->
ARR14(2)
--------->
ARR11(3)
<---------
ANAC58
---
<---------
GLK1(1)
--------->
ZAT18
--------->
At4g35610
<---------
ZAT14
---
-----
ANAC46
--------->
WRKY12
----------->
GT1
<---------
At4g35610
--------->
ZAT14
<--
-
DOF2
<---------
ZAT6
--------->
GLK1(2)
--------->
ZAT6
--------->
GLK1(2)
<--
tgggaatctgaatccctagagttgactagagagagtatctcttggatgagtaacactagctcatcagactctggcttctcctctgtagtcaaatccattg
18550200
---
<---
--------->
LBD16
----
<---------
ANAC58
-----
<---------
ANAC58
------
<---------
ANAC58
<-----
---------->
HVH21
<---------
ANAC46
-------
-------->
WRKY12
<---------
bZIP60(2)
-------
-------->
WRKY38(1)
<---------
ZAT14
<------
------>
ZAT2
--------->
ALFIN1
----------->
GT1
<-------
------>
At4g35610
---------->
DOF2
<---------
ANAC58
---------->
DOF2
--------
-------
At4g35610
<-----------
GT1
<---------
RAP2.6(2)
<---------
ZAT6
--------->
AHL20(2)
---------
-------
ZAT2
<---------
YAB1
--------->
ZAT14
---------->
DOF2
----------->
GT1
----------->
HVH21
agctgaccagagagattattttaccaaagagtgttgtggcttccgagtccaaagcagagttaaagagagataaattttgaaaaaccattgacatgagatc
18550300
<---------
ZAT14
<---------
At4g35610
-------->
RAV1(1)
------
ETT(1)
------->
HVH21
->
ZmHOX2a(2)
<----
--->
CCA1(2)
<------
NtERF2
-
ZmHOX2a(2)
<---------
DEAR3(1)
-->
AGP1
<---------
ZAT2
-->
ARR14(2)
<---------
ANAC58
--------->
At4g35610
---
ARR14(2)
<---------
ANAC46
------>
NtERF2
-----
--
GLK1(1)
<---------
ANAC58
--------->
LBD16
->
GLK1(1)
--------->
ARR14(2)
--------->
ARR11(3)
------->
TEIL
<---------
At4g35610
-->
ARR10
<---------
ARR14(2)
<---------
ARR11(3)
----------->
HVH21
<---------
LBD16
-----
cgacagcagtttggactgagactccaaatccatagagttgaagagagatattgcttgagtagtgagtgacatgaactctgactccggcttcggctgcgaa
18550400
--------->
ZAT2
<---------
ANAC58
--------->
At4g35610
--------->
ANAC58
<---------
At4g35610
--------->
ANAC58
<---------
ZAT2
<------
MYB46(1)
--------->
ARR14(2)
<------
MYB83
<---------
ANAC46
<---------
ARR14(2)
<---------
HSFB2a(2)
-----
-----
ARR14(2)
--------->
MYB59
--------->
MYB52(2)
---->
ARR14(2)
--------->
MYB46(2)
<---------------
AtSPL8
<-----
---->
GLK1(2)
<------
ZmHOX2a(1)
<---------
ANAC58
---------->
DOF2
--------->
TOE2(3)
<--
tccaaatccattgagctgactagaaggattagttcggtaagcaatggagtggcatcccagtacaagttaaagtactcgacaaacattagttgagtaagga
18550500
------>
ZmHOX2a(2)
<-------
TEIL
<------
ZmHOX2a(2)
<---------
ARR14(2)
--------->
ARR14(2)
------>
ZmHOX2a(2)
<---------
LBD16
<---------
LBD16
<---------
ARR14(2)
--------->
DEAR3(1)
--------->
LBD16
--------->
ARR11(3)
<---------
GLK1(1)
<------
ZmHOX2a(2)
<---------
GLK1(2)
--------->
GLK1(1)
--------->
LBD16
<---------
ARR11(3)
--------->
At4g35610
<---------
ARR14(2)
<---------
RVE1(1)
------>
GT1
------>
NtERF2
--------->
ARR14(2)
------>
NtERF2
*
TSS
<--
-
ZmHOX2a(1)
--------->
GLK1(2)
<XXXXXXXXXXXXXXXXXXXX
MIR2934
---------->
DOF2
<---------
YAB1
<----
-------
ZAT6
--------->
ARR14(2)
<---------
ZAT6
<----------
DOF2
----------->
GT1
<------
gtgataagagctccgactccgaatccggatccggatccat
agtgtttgccgagagaggctctttgagtaaaagttttgttaata
tgagagatttttgagg
18550600
<---------
At4g35610
<---------
RAP2.6(2)
<---------
DEAR3(1)
--------->
RAP2.6(3)
--------->
MYB59
<---------
AHL20(2)
------->
TEIL
<----------
DOF2
--------->
AHL20(2)
-------
YAB1
<------
NtERF2
--------->
YAB1
<----------
DOF2
----------->
GT1
--
ZmHOX2a(1)
<----------
DOF2
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
---
TOE2(3)
<---------
DEAR3(2)
<-----------
GT1
------------>
CBF
<---------
ZAT6
--------->
AHL20(2)
atgaatgtaaggtcggcttatgcaactttcatattttcttcataaacaaaacaatagctttgacttttgatgcctagtgggagagtgaaatttaaaaata
18550700
--------->
AHL20(1)
------->
GAMYB
--------->
AHL20(2)
--------->
ANAC58
<---------
AHL20(2)
<---------
DAG2
--------->
ANAC58
--------->
ANAC58
<----------
DOF2
--------->
MYB52(1)
--------->
ANAC58
--------->
ANAC46
<---------
AHL20(1)
--------->
ANAC58
<---------------
AtSPL8
<-----------
GT1
<---------
ARR11(3)
--------->
ANAC58
<---------
AHL20(2)
---------->
DOF2
<-----------
GT1
<-----
--------->
MYB59
--------->
AHL20(2)
--------->
AHL20(2)
<---------
ICU4
<---------
AHL20(2)
----
ctggcaagtaggcaacgaaaacaaacatatatataaacaagtaccaattttttgtatttgtataaaagaattaccagctattaacttttctatatattaa
18550800
------>
MYB83
--------->
ANAC58
------>
MYB46(1)
--------->
ANAC58
<------
ZmHOX2a(1)
----------->
GT1
--------->
MYB59
--------->
YAB1
--------->
ANAC46
<----
------
GT1
<---------
MYB59
<---------
TOE2(3)
--------->
YAB1
<-----------
GT1
----->
MYB46(3)
<-------
TEIL
<---------
AHL20(2)
--------->
AtLEC2
<----------
DOF2
caactagattaggacctatctaaatacacctgtataagaaatacatgttaagttttattcaattgtaaatggtaacatgcacacaagtttttctttataa
18550900
--------->
AHL20(1)
<---------
AHL20(1)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(1)
--
--------->
YAB1
<---------
MYB46(3)
<---------
YAB1
<---------
ZAT18
----------
<-----------
GT1
<---------
ICU4
<---------
AHL20(2)
<---------
AHL20(2)
<-
<-----------
GT1
--------->
AHL20(2)
--------->
YAB1
<---------
ANAC46
<---------
ATHB12
-------
GT1
--------->
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
--------->
TOE2(3)
accggttttgaactattcaatcttacaaaacaatttaactatctatctcatcataataaattatattttttagttttgtgcattttatctcaatggttaa
18551000
--------->
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------------->
AGL15
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------------
AGL15
--------->
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
<-----------------
AGL2
----------->
GT1
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
MYB52(1)
------->
At4g35610
--------->
AHL20(1)
--------->
AHL20(2)
--------->
ARR11(3)
<-----
->
GT1
<---------
AHL20(2)
<---------
ARR11(3)
<---------
AHL20(2)
<---------
AHL20(2)
------
--------
At4g35610
<-----------
GT1
--------->
AHL20(2)
<---------
AHL20(2)
--------->
MYB52(2)
<-------
gagctgaaaaatttatattaaaatgtcacaatatatatatatatatatatatatatatatatatatatatatattgttagttttctattttgagtaagga
18551100
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AGI:
At3g50010.1
Description:
DC1 domain-containing protein. similar to MEE53 (maternal effect embryo arrest 53), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G10560.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G02540.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G48320.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DC1 (InterPro:IPR004146); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR0018
Range:
from: 18548166
to: 18550584
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.