Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->YAB1                 --------->ATHB12                                          <---------ICU4                <---------YAB1                          --------->YAB1    <---------ATHB12            <---------ARR11(3)                    --------->ANAC58      --------->YAB1            --------->ARR11(3)                    --------->ANAC58    <---------YAB1   --------->ANAC58                               --------->ANAC46  <--------HAHB4                  -   <---------ALFIN1                               --------->ANAC55(1)--------->TOE2(3)              -   --------->DEAR3(1)                            --------->LBD16    --------->YAB1                  -   --------->ANAC58  ----------->GT1             <---------LBD16   <---------YAB1                   - ->DOF2    <---------CCA1(2) --------->ATHB12--------->ARR14(2)<----------DOF2                      <   ctgcaacgcctctaaatcttcattggtaaaacgattagactcgtctaaatccacggaatcatcttctttatcattaatcatcttcatacttcagaaaaaa  18113700                              --------->ATHB12                              --------->YAB1                                                       --                              <--------ATHB1                                                      <--          --------->ZAT6     <---------ATHB12                                                     <-- -------->ANAC58 --------->ANAC58                                                          <---------HSFB2a(2) -------->ANAC55(2)          <---------YAB1                 <------NtERF2                  --------->HSFB2a(2) -------->ANAC46 --------->ANAC46                          ------>NtERF2                --------->GLK1(2) -------->ANAC58 --------->ANAC58                         --------->DEAR3(1)     <---------At4g35610 ---------ANAC55(2)          --------->ICU4          ----------->ARR10           --------->At4g35610   tcacgaaatacaacactacaagcatgggacaatgatggagattacttacagagattagagacgccgataatgtagattagaacagcagagattccagtag  18113800                                                                        =============================                                                                     <---------HSFB2a(2)                                                                     <---------LBD16                                                                 --------->GLK1(1)                                                            <---------ANAC46                              <-------TEIL                 <-------TEIL <------ZmHOX2a(1)         <--                             <----------DOF2            --------->At4g35610                     *TSS-                          --------->ARR11(3)            --------->ZAT2 --------->LBD16         ------        --------->YAB1    <---------ARR11(3)            <---------ZAT2--------->LBD16          <----- -------->DOF2       <-------TEIL                 --------->HSFC1(2) <-----------RAV1(2)    <-------- -------WRKY38(1) <---------At4g35610             <---------HSFC1(2) --------->HSFB2a(2) --------->GLK1(2) -------WRKY45    --------->At4g35610    --------->LBD16<---------At4g35610       ----------->GT1----   tcaaagctaataagaatatcagatgcaagagcttcatcgattccccagtagaagcttcagcttcgtgatttccaggagaagacgatgtgaaattctcgat  18113900        ---------->DOF2 ===HOX2a_HOX2a --------DOF2 ----------->CBF --->ARR11(3)             <------ZmHOX2a(2) ----ARR11(3)            <-----------ARR10                                                  <-------- -HSFB2a(2)         --------->ARR14(2)                                         <---------RAP2.6(2)<-- -->ZmHOX2a(2)      <---------ARR14(2)    <---------YAB1     <---------YAB1   --------->RAP2.6(3) <--   ctttcaattcaaaagtatccaagttccgatctaagcgagtgagtatgaaaacagcatgtagttctcattctgaagcttaagacggcttacagttctttca  18114000                                          <---------------------WRI1                                        --------->ANAC58                                        --------->ANAC58                                       --------->SPL7                                     <---------SPL7                                 --------->ANAC55(2)                                    <---------MYB52(2)                              --------->ANAC46                                   <------NtERF2                                   <---------LBD16            <---------ANAC58       <---------At4g35610                           ----------->HVH21            <---------ANAC46       --------->At4g35610                --------->ANAC58 --DOF2    ------>NtERF2      --------->ANAC58                        --------->ANAC58    ----------- -------DAG2<---------ANAC58  --------->ANAC58            ----------->GT1  <------NtERF2--------->SPL7 --------DOF2                 --------->ANAC46       >>>>>>>ZML2    --------->MYB52(1) --------->MYB52(1)   ctttataaaacgctgcgtagataacttaagacaagccagcgaacgccgaaatgttctagtgagtaacatgaaacggcatcgatttgacggaacggtattt  18114100                        <-----------GT1                      ----------->TBP               ------->MYC4               ------->PIF5               <-------MYC4               <-------PIF5               ------->MYC2               <-------MYC3               ------->MYC3               <-------MYC2              <---------TGA1a              --------->PIF3(3)              <---------PIF3(3)              <---------O2              <<<<<<<<<<HY5              --------->O2              --------->TGA1a                                               <---------At4g35610              --------->bZIP60(2)                                      --------->RVE1(1)              <---------bZIP60(2)                                     --------->ARR11(3)              >>>>>>>>>>HY5                                           <---------ARR11(3)             <<<<<<<<<<AtbZIP1   <------------CBF                     --------->GLK1(2)          <----------------PIF3(2)                  --------->TOE1(3)--------->CCA1(1) >GT1     <-----------------PIF3(1)  *TSS           --------->TOE2(3)--------->RVE1(1)         ------   caaatgagaactggccacgtggctataaaccccttcattgttcatcttcaaaaaccctaacatttctgaaaaaatctctgcttcttcaaattccatcaaa  18114200                                                                                          ===========                                                                                          ------>ZmHOX2a(2)                                                                                         ============                                                                                         <------ZmHOX2a(2)                                                                                        <---------ARR14(2)                                                                     --------->ALFIN1   --------->ARR14(2)                                                                   <-----------RAV1(1)  <---------ARR11(3)                                                                   --------->ALFIN1     --------->ARR11(3)         --------->DAG2  --------->YAB1                    <-------GAMYB               <---------GLK1(1)        ---------->DOF2 <---------ATHB12                  <---------MYB46(3)           --------->At4g35610 --------->ZAT2 ---------->DOF2          <---------DAG2  <---------RAP2.6(2)           <---------At4g35610 --------->At4g35610    --------->ICU4   <----------DOF2 <---------DEAR3(1)      <---------ANAC58   - ---->DOF2  --------->TOE1(3)    ----------->GT1         <---------ANAC46        <---------ANAC58<---   agcagcttgataaagcttaaaagcccatgatgaaatggtgaaactttttgatttcaatggcggttttaagtgtgggtttcttcgcttgcagatcccattt  18114300                                          ----------->RAV1(1)                                         --------->ANAC46                                         --------->ANAC58                              ----------->GT1                             <---------TOE1(2)                         --------->HSFC1(1)                         <---------HSFC1(1)                <-----------GT1    --------->MYB46(3) ======HOX2a_HOX2a       <---------HSFB2a(2) ======HOX2a_HOX2a       --------->HSFB2a(2) ----------->GT1                                      --- ----->ZmHOX2a(1)<---------At5g28300     --------->ANAC58  <---------AHL20(2)               <-------- --------GT1  <----------DOF2<---------TOE2(2)   <---------YAB1                        <<<<<<<<<TBF1   tcctgttcttcccctgttttactgtttctcgaaggtaacaactacgacagtataattctatgtaattcgttctcatatacttaaaattcttcttcttttt  18114400                                                                                        <---------YAB1                                            <---------At4g35610                       --------->YAB1                                            --------->At4g35610                       <---------ICU4                                            <---------ZAT2                           <---------YAB1                                            --------->ZAT2                           --------->ICU4                                          <---------RAP2.6(2)                      --------->YAB1                            --------->At4g35610                                 <---------ICU4                <---------ANAC58 --------->ZAT14                                --------->YAB1                <---------ANAC58 <---------ZAT14                               <---------YAB1               <---------At4g35610       <---------At4g35610                   --------->ICU4 <---------AHL20(2)         <---------At4g35610                              --------->YAB1 ------>TOE2(3)--------->At4g35610<---------ALFIN1                  ---------->DOF2<---------ICU4 --DOF2 ---------->ID1   <-------TEIL<-----------RAV1(1)        ----------->HVH21 <---------YAB1    <   tcttaaatttgttgtttagcttacaggttcagctcaacactgttgctgctgcaatggagactgtggatgacaaagacagtgatcatcatcatgacaaggg  18114500                                            <---------WOX13(1)                      --------->ANAC55(2)                                         <---------AHL20(2)                   <----------DOF2                             ------->TEIL--------->AHL20(2)               <-----------GT1<---------WOX13(1)                    --------->TOE2(3)   --------->AHL20(2)            ------>ZmHOX2a(1)--------->ATHB12 ---------YAB1      <----------DOF2<---------WOX13(1)       <----------DOF2<-----------GT1   ttctaataagacgagtaagttactttaaacgaatttgatggatttaattgaaaactgtgcttctttttattcctatttatctttttaagtgattgcaact  18114600  Previous    Next  AGI:  At3g48820.1    Description:  glycosyl transferase family 29 protein / sialyltransferase family protein. similar to glycosyl transferase family 29 protein / sialyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G08660.1); similar to sialyltransferase-like [Glycine max] (GB:CAJ15144.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68367.1); similar to sialyltransferase-like protein [Lotus japonicus] (GB:CAJ15148.2); contains InterPro domain Glycosyl transferase, family 29; (InterPro:IPR001675) Range:  from: 18110714    to: 18113896    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g48830.1    Description:  polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein. similar to polynucleotide adenylyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G23690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68671.1); contains InterPro domain Polynucleotide adenylyltransferase region; (InterPro:IPR002646); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 18114137    to: 18121201    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.