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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
HSFB2a(1)
<---------
HSFB2a(1)
----------->
GT1
<------
MYB46(1)
>>>>>>>>>
MYB98
<------
MYB83
--------->
YAB1
<-------
MYC2
---------
YAB1
<---------
ANAC58
<-------
MYC3
-------
ICU4
<---------
ANAC58
------->
MYC3
<----
------>
YAB1
<---------
ANAC46
------->
MYC2
<----
----->
ICU4
<---------
ANAC58
---------->
DOF2
---------
--->
YAB1
--------->
TOE2(3)
<---------
ANAC58
--------->
At4g35610
---------
---
AHL20(2)
<---------
MYB46(3)
<---------
YAB1
<---------
At4g35610
<--------
tcatcatagtaacataaacaaggattgttgtaagagtttgcgtatgcttgaaactacaagagtagaaactgagctaaaagcacatggaaggttactttaa
17476200
------>
ZmHOX2a(1)
---------->
ID1
<----------
DOF2
--------->
AHL20(2)
<---------
DAG2
<----------
DOF2
-----
TOE2(3)
--------->
ANAC58
<-----------
GT1
<---------
DAG2
-----
YAB1
<----------
DOF2
<------------------------
ANAC81
<-----------
GT1
>
TOE1(3)
<<<<<<<<<
TBF1
<-----------
GT1
<---------
ICU4
--------->
YAB1
--------
>
TOE2(3)
<<<<<<<<<
TBF1
--------->
ANAC58
<----------
DOF2
--------->
TOE2(3)
<-------
--
DOF2
<----------
DOF2
--------->
ANAC46
<----------
DOF2
<----------
DOF2
<---------
AHL20(2)
cattggaaaaacacatctttcttcttcttcctttcaagtcacttttcctcttcttttctttcattttgacatttctttcttaatactttttaaatatgta
17476300
<--------
P
--------->
ATHB12
--------->
AHL20(2)
--------->
YAB1
<----------
DOF2
<---------
YAB1
--------->
YAB1
--------->
YAB1
--------->
AHL20(2)
<---------
YAB1
--------->
YAB1
<---------
ATHB51
<---------
AHL20(2)
<---------
bZIP60(1)
--------->
WOX13(1)
--------->
AHL20(2)
--------->
YAB1
--------->
bZIP60(1)
->
ANAC55(2)
--------->
ARR11(3)
<---------
YAB1
<---------
TOE2(2)
<---------
ARR11(3)
--
ANAC55(2)
<---------
ARR11(3)
<---------
AHL20(2)
<---------
TOE1(2)
<---------
YAB1
atggaatcaattatagacctttatataggtgtttgatattatatgattttataatcataggttgctaaataagaatgtaagtcatgatatcatatgaata
17476400
--------->
HSFB2a(2)
--------->
HSFC1(1)
<---------
HSFC1(1)
<---------
HSFB2a(2)
--------->
YAB1
<--------
ATHB1
--------->
ANAC46
-------->
HAHB4
--------->
ANAC46
--------->
ANAC46
<---------
ICU4
------->
GAMYB
--------->
ANAC58
--------->
ICU4
---------->
DOF2
<---------
ATHB12
--------->
ANAC58
<---------
YAB1
<
--------->
ANAC58
--------->
WOX13(1)
<-------
TEIL
<---------
ATHB51
<
--------->
ANAC46
<---------
ICU4
--------->
YAB1
<-------
TEIL
--------->
YAB1
-----
--------->
ANAC58
--------->
YAB1
--------->
ANAC46
---------->
DOF2
--------->
AHL20(2)
-
caatcccaagcaaagacaacacacatcatcatgttctcccctcaataacaatcacttgcaaagtacatacacacaaactcaaaataataattctagaaaa
17476500
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
<-----------
GT1
-------->
ATHB1
--------->
ATHB51
------------>
CBF
<--------
HAHB4
<---------
HSFC1(2)
<---------
ICU4
--------->
HSFC1(2)
--------->
YAB1
<---------
HSFB2a(1)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
HSFB2a(1)
<--
---------
YAB1
<----------
DOF2
--------->
ANAC58
---
---------
ATHB51
--------------->
AGL15
--------->
ANAC58
---------
------->
CBF
--------->
AHL20(1)
<---------------
AGL15
--------->
ANAC46
---------
-------->
ICU4
--------->
ANAC46
<---------
AHL20(2)
--------->
ANAC46
*
TSS
---------
caattattaactaatttaatatacaaaactaaattccctttaattagttaagacatcacaccaagaaacttctc
aattccccatacaaactcatacccaa
17476600
<-------
TEIL
<---------
SPL7
<---------
ANAC46
--------->
DEAR3(1)
------>
NtERF2
-
--------->
LBD16
<
--------->
DEAR3(1)
--
--------->
AHL20(2)
------------------>
SPL14
<--
-------
ARR11(3)
--------->
ANAC46
---------
------>
ARR11(3)
<<<<<<<<<
TBF1
------>
ZmHOX2a(1)
<---------
>
ANAC58
<---------
CCA1(2)
<---------
ATERF1(1)
<---------
ANAC58
>
ANAC46
<------
NtERF2
<---------
MYB52(1)
<---------
ANAC58
>
ANAC58
<----------
DOF2
---------->
ID1
<---------
At5g28300
<---------
YAB1
<-----
gaacttcaaaaaa
atgcttagaggcatctttcacatttgcctcttggcctcatttcttcttctaccgttctcctccgccgtacatgatagtggcttcacc
17476700
--------->
MYB46(3)
<---------
MYB55(2)
------>
MYB83
--------->
RAP2.6(2)
--------->
ZAT2
--------------->
AtSPL3
--------->
ARR14(2)
<---------
ZAT2
<---------
PCF5
---------->
DOF2
------>
MYB46(1)
--------->
TCP20
--------->
ANAC46
-------->
P
<---------
PCF2
----------->
RAV1(1)
<---------
ALFIN1
--------->
DEAR3(2)
--------->
TCP15(1)
--------->
AtMYB61
<---------
ALFIN1
<---------
SPL7
--------->
ALFIN1
<---------
ALFIN1
--------->
ANAC46
<
-------->
ABI4(2)
--------->
LBD16
--------->
MYB46(3)
------>
MYB83
------>
NtERF2
---
---------
MYB46(3)
<---------
ANAC46
<---------
MYB55(2)
------>
MYB46(1)
----
------->
ALFIN1
<---------
ANAC58
------>
NtERF2
--------->
ZAT18
<---------
ALFIN1
----
-------
MYB52(1)
<---------
ANAC58
<---------
ALFIN1
--------->
AtMYB61
----
-->
HVH21
------>
ZmHOX2a(1)
--------->
ANAC46
<---------
ALFIN1
-----
-
DOF2
------>
ZmHOX2a(1)
--------->
MYB46(3)
--------->
DEAR3(1)
<------
----
LBD16
<---------
ALFIN1
<-----------
GT1
<---------
ARR14(2)
------->
GAMYB
---------
ggtggtaccgatgctcctcctccgtgggaccataatgtttccccaccaccagaaaccgcaccatccccaacccccacctcgagtccctctacaacctcac
17476800
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
--------->
At4g35610
<------
NtERF2
--------->
ATERF1(1)
<---------
ERF1
<---------
RAP2.3(1)
<---------
RRTF1(1)
<---------
ATERF1(1)
<---------
RAP2.3(2)
<---------
RAP2.3(3)
<---------
DEAR3(1)
<------
NtERF2
--------->
ATERF1(1)
<---------
At4g35610
--------->
At4g35610
------>
NtERF2
----------->
HVH21
------>
ZmHOX2a(1)
--------->
LBD16
------>
NtERF2
<---------
HSFB2a(2)
=================================
HOX2a_HOX2a
<---------
bZIP60(2)
---
--------->
HSFB2a(2)
----------->
HVH21
---
----------->
RAV1(2)
<---------
ALFIN1
--------->
LBD16
---
---------
ALFIN1
--------->
ABI4(2)
--------->
LBD16
<----------
CDC5
--->
NtERF2
<---------
ATERF1(1)
--------->
HSFB2a(2)
--------->
ANAC46
----->
DREB2C(2)
--------->
MYB55(2)
<---------
LBD16
--------->
ANAC58
----->
DEAR3(1)
<---------
MYB46(3)
<---------
ANAC46
<---------
DEAR3(1)
<---------
ALFIN1
----->
ANAC46
--------->
ALFIN1
<-----------
HVH21
--------->
ALFIN1
<---------
ALFIN1
---->
MYB46(3)
<---------
DEAR3(1)
--------->
MYB52(1)
------>
NtERF2
<---------
MYB46(3)
--------->
ANAC58
---
ALFIN1
<---------
MYB52(1)
--------->
MYB46(3)
----------->
HVH21
----------->
RAV1(1)
--------
>
AtMYB61
<---------
WRKY18(1)
<------
ZmHOX2a(2)
<---------
LBD16
<---------
AtMYB61
<---------
REM1(2)
cgccatctcctggaccggtggctgcgccatctccgatcaacaacggctctgtctccggggacatgacatggtggtgcaacaagactccacacgctgagac
17476900
<---------
ARR14(2)
--------->
HSFC1(2)
--------->
HSFB2a(1)
--------->
AtMYB61
--------->
MYB46(3)
<---------
WRKY12
<---------
HSFB2a(2)
--------->
MYB46(3)
<---------
WRKY38(1)
--------->
HSFB2a(2)
------>
MYB83
--------->
ARR14(2)
--------->
WRKY18(1)
<---------------
AGL15
--------->
TOE2(3)
<---------
HSFB2a(1)
<---------
ANAC58
>>>>
<---------
ICU4
--------->
ANAC46
------>
MYB46(1)
<---------
ANAC46
<---
--------->
ICU4
--------->
ZAT18
--------->
SPL7
<---------
ARR11(3)
<---------
TOE2(3)
------>
ANAC58
<---------
At4g35610
--------->
TOE2(2)
<-----------
HVH21
<---------
ANAC58
>>>>
------>
AtLEC2
--------->
At4g35610
--------->
TOE1(2)
<---------
LBD16
--------->
ANAC55(2)
>>>>
------>
ANAC58
--------->
LBD16
--------->
TOE1(3)
<---------
HSFC1(2)
<---------
ANAC55(2)
-----
--->
ARR10
<---------
LBD16
----------->
RAV1(1)
<---------
TOE2(3)
<---------
LBD16
-----
atgcaattactacttccggaagagctcacaaaacaacattaacctacgaccaccaaggttccggtccgagttcttacggatgctggtcaaggtagcactt
17477000
---------->
DOF2
--------->
MYB52(1)
--------->
MYB46(3)
--------->
LBD16
--------->
ANAC58
<---------
ANAC58
--------->
ANAC58
<---------
ANAC58
------->
GAMYB
------>
MYB46(1)
<---------
MYB111(1)
--------->
ANAC58
--------->
MYB46(3)
--------->
ANAC58
<---------
MYB55(2)
--------->
ANAC46
<---------
MYB111(2)
------>
MYB83
--------->
At4g35610
>>>>>>
WRKY38
--------->
ZAT2
------->
GAMYB
<------
MYB83
<---------
CCA1(2)
------
WRKY18(1)
<---------
ZAT2
--------->
AtMYB61
<-----------
HVH21
>>>>>>
WRKY26
<---------
MYB52(1)
------>
MYB46(1)
<------
MYB46(1)
<----
>>>>>>
WRKY43
--------->
WRKY18(1)
<---------
At4g35610
---------->
DOF2
<---------
ANAC46
------>
HVH21
<-----------
HVH21
XXXXXXXXXXXXXXXXXXXX>
MIR171A
<---------
MYB52(1)
-----
---->
WRKY38(1)
--------->
ANAC46
<---------
TOE2(3)
------>
MYB83
<---------
GLK1(1)
----------->
GT1
gaccaagccgtgatcacacacagtcaaaccgttaagtttggaccgagctgcaccaacaaccaaaggaaagccgcttggtcagactgcgtaaatctcttcc
17477100
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AGI:
At3g47400.1
Description:
pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G51490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42679.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501)
Range:
from: 17476575
to: 17479103
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.