Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->ANAC58                 --------->ANAC58          --------->LBD16          --------->HSFB2a(2)         <---------LBD16         --------->ANAC55(2)           <------MYB46(1)         <---------ANAC46              <------MYB83         <---------ANAC55(2)   <---------ZAT2        <---------LBD16        --------->At4g35610   <---------ARR11(3)          <---------At4g35610   --------->ARR11(3)          --------->ZAT2                                              --------->ANAC46  <------ZmHOX2a(1)          <-----------RAV1(2)                            --------->REM1(1)-------- ---------TOE2(3)--------->ANAC46     <---------AtMYB61       --------->WOX13(1)         --------->ANAC46   tgaaggatattacgggaacaagcaagaggtctcagctgatttggtgttcttccatcttctctatcaatctccattgctacaatacttcttcacacaaaag  16989500                                           --------->GLK1(2)                 <----------DOF2          <---------ARR14(2)           --------->ANAC58               <---------GLK1(2)      --------->ZAT6     ---------->DOF2                      --------->ARR14(2)  <-----------GT1                       - -->DOF2   --------->ANAC58       <---------GLK1(2)  --------->At5g28300                          ---   ggtttcacaaagtaagcatcttttgtcacaaaatcaaattctcagattctataactgtgaattgttaccactgaaaacaaaatttgaactgcttctagct  16989600             --------->AHL20(2)             <---------AHL20(2)          <XXXXXXXXXXXXXXXXXXXMIR172B*     <------MYB83     <------MYB46(1)          --------->MYB46(3)    --------->MYB111(1)      ------>MYB83   <---------MYB55(1)        ------>MYB46(1) -------->ZAT6              ----------->RAV1(1)                --------->AHL20(2) <-----------GT1 -------->RAV1(1)         --------->MYB46(3)            <----------ID1   <----------DOF2     <-------   caacagtaggtgtattttaatggttctgaccaacatccgagtagtttttttgttaattgagacaaaaaaatcgttctttcaattctacaatactcgttat  16989700                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 <---                                   --------->ANAC58                     <---------TOE2(3)        <---                                   --------->ANAC58              ------>MYB83                   <----                                   --------->ANAC46              ------>MYB46(1)              <------                             <------ZmHOX2a(1)                 <---------MYB59                -------       ---------->DOF2      <----------ID1                   ------->TEIL <------ZmHOX2a(1)   ------- --MYB52(1)              ---------->DOF2        --------->AGP1 --------->TOE2(3)    --------->At4g35610   ctagcacataaaagacgatgtatgaacaaaaggacacacgaatcaacacagagctagactaagaacctaattttgaggaagctagaagcagagacgattc  16989800                                           --------->ARR14(2)                                           <---------ARR14(2)                                        <---------ANAC55(2) ------>LBD16                           --------->ANAC46 ------ANAC55(2)                        --------->ANAC55(2) ----->ANAC55(2)                        --------->ANAC58 ------ANAC58                           --------->ANAC58 ------ANAC55(1)                       <---------LBD16                  ----------->RAV1(1) ------ANAC58                <---------ARR14(2)                         --------->MYB52(1) ------ANAC46                --------->ARR14(2) ---------->DOF2        --------->AtMYB61 -------------------TaNAC69(2)      <---------At4g35610        --------->At4g35610 ---ARR14(2)        ---------->DOF2 --------->At4g35610      --------->MYB46(3)<------ZmHOX2a(1) -->GLK1(2)      <---------TOE2(3)  --------->ZAT2 --------->At4g35610--------->MYB46(3)           <- -->ARR14(2)    --------->MYB52(1)  <---------ZAT2 <---------ZAT2------->GAMYB*TSS                 <-   cgtatcaaacaagaagactaacgaaagagagaatacacagctacggaactgaaagctggaagaacaactgaaaccaccagaggagagaaactcgaagaat  16989900                                                                      <---------MYB52(1)    ---------                                                                      --------->ARR14(2)   --------->TOE2(3)                                           <---------ZAT14            <---------ARR14(2)   ==========                                           --------->ZAT14           <---------MYB52(1)    <---------                                           <---------ARR14(2)       ----------->GT1        <---------                                           --------->ARR14(2)       --------->LBD16        --------->TOE1(3)                                  --------->WOX13(1)              <---------LBD16       <-----------GT1                                <---------ATHB12           ----------->GT1      <------------CBF --------TOE1(3)                ------------>CBF        --------->MYB52(1)     --------->ATHB12 --------TOE2(3)     ------------>CBF--------->YAB1    --------->MYB52(1)    <<<<<<<<<<<<<<<<<LFY   tagggtttatttgtttcaaaaccctcaatttcaaatcaattagagtataccgaaaacaaaccggttaatccggttattcaaacattggtttaactttaac  16990000                      --------->ANAC55(2)                                              --------->ARR14(2)                   <---------GLK1(2)                                                   <---------ARR14(2)     ------------>CBF <---------ANAC55(2)                                              --------->GLK1(2)     --------------->AGL15                                  *TSS               <---------ANAC46 <---------ZAT18   <---------ARR11(3)                  --------->LBD16       --------->MYB52(1)   --- <---------ZAT14   --------->ARR11(3)                 <---------HSFB2a(2)   ----------->HVH21-------- --------->ZAT14 ----------->ARR10             --------->WOX13(1)           ------->GAMYB ----------- >DOF5.7(2)   <------ZmHOX2a(1)              ------------>CBF  --------->GLK1(2)----------->GT1 ----- ====================MADS_MADS          --------->YAB1<---------ANAC46      ----------->TGA1 -------- -DOF2  <------------CBF         <---------MYB46(3)   --------->HSFB2a(2)  <---------MYB52(2)-------- ------AGL15<---------TOE2(3)   --------->ALFIN1     <---------LBD16<---------ANAC46  --------->RVE1(1)   cagtaaactcaattgaggaaagatacttaatacggtgtttgaacataatcaatcttccggagaagaatttgtgtataactgacggaaaaaatccgacgca  16990100                                  --------->LBD16 ------>DEAR3(1)                <---------LBD16                                                  ---- ->ANAC58                     --------->GLK1(2)                                                <----- >HVH21                  <-------TEIL                                                          ------ -->TEIL          ------>ZmHOX2a(2)                                                <-----------HVH21 ->ANAC46        --------->At4g35610                           <---------YAB1      <-----------TGA1 ->ANAC58        <---------At4g35610               <------ZmHOX2a(1)--------->ATHB12  <---------DEAR3(2)   tcgacgatatcaaattttgatctgagattcaaattccggtgataacgcgaagaggaagatggatgatgaattgttggaattgcagcgtcagttcgagttc  16990200                                                                          <---------ANAC58                                                                          <---------ANAC46                                                                          <---------ANAC58                                                                         ---------->ID1                                                                     <---------ANAC58                                                                     <---------ANAC58                                <------ZmHOX2a(2)                   --------->ZAT2                               --------->ARR14(2)                 <------ZmHOX2a(1)                 -     --------->At4g35610     <---------DEAR3(2)                   ===============================HOX2a_HOX2a   <-----------RAV1(2)      --------->ETT(1)                   <-----------RAV1(2)          --------- ----->At4g35610 <---------ANAC58     <-----------RAV1(1)  --------->HSFC1(2)           <---------ARR14(2) ----ZAT18       <---------ANAC58------>ZmHOX2a(2)         <---------HSFC1(2)           --------->ARR14(2) --->ZAT18  --------->WRKY18(1)<---------ARR14(2)       <---------At4g35610<----------DOF2------>ZmHOX2a(2)   gctcaacaggtgaagtcaagcgtgagattgtcggatcgaaatgttgtcgaattggttcagaagcttcaggagcttggcgttattgacttcgatctgcttc  16990300                                                     --------->ALFIN1        --------->LBD16                              <---------ANAC46      --------->At4g35610                          --------->LBD16      <---------LBD16                            <---------LBD16               <---------YAB1   ----------->HVH21                        <---------ANAC58                 --------->YAB1  <-----------HVH21                         <---------ANAC58         --------->LBD16  <-----------TGA1 --------->ANAC46<---------GLK1(2)<---------MYB52(1)       <---------ICU4 ---------------->AGL1           --------->ICU4<---------ARR14(2)   <---------HSFB2a(2)           <-- >At4g35610---------->DOF2<-----------RAV1(2)  --------->ARR14(2)   --------->HSFB2a(2)   <---------ANAC46   ataccgtcaccggaaaagaatacatcactcaggtactgattctatttcgtttccggtgtgaatttagactccagaagaatcatcactgggtttcgcatag  16990400  Previous    Next  AGI:  At3g46210.1    Description:  3' exoribonuclease family domain 1-containing protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G07110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44027.1); contains InterPro domain Exoribonuclease, phosphorolytic domain 1; (InterPro:IPR001247) Range:  from: 16987725    to: 16989878    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g46220.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO21736.1) Range:  from: 16990060    to: 16995162    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.