Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->ANAC58     --------->ANAC58 ------->AHL20(2) ----->TOE2(3) --TEIL---------->DOF2 --ZAT18 -ANAC46 -ANAC58                                                              ------>MYB83              <---- -ANAC58                                                     <-----------GT1                    <---- ----->AtSPL3                                            <---------AHL20(2)                     <---- ----->AtSPL8                                            --------->AHL20(2)       <----------DOF2 <XX ------AtSPL8               --------->ALFIN1       --------->YAB1     ------>MYB46(1)        <-------   attaaacaagaaagctagaaacctattgaagtgttgttaatggagaaattcaattgtatttttttactcaccttcccatctaagcttttcaatgcctttc  16923900                                      <---------MYB52(1)                                     ------>ZmHOX2a(1)                                 --------->ARR14(2)                                 <---------ARR14(2) -----ANAC58              --------->DAG2                                              ----------->RAV1(1) -----ANAC58       ----------->GT1   <----------DOF2                                ------->GAMYB -----ANAC46 --------->GLK1(2)   <---------ARR11(1)             --------->YAB1     --------->ANAC46 XXXXXXXXXXXXXXXXXXMIR825---------->DOF2--------->MYB59   ------->TEIL            -------->P ---DOF2    <---------GLK1(2)    --------->GLK1(2)       <---------GLK1(2)      --------->MYB46(3)   gtgcatcatcttcagaatcgaaggtgataaagccgaatcctttaggtctctgtgtttctgaatctctaataagccgagctaaacaaccccacaaacacaa  16924000                                                              ---------->DOF2                                                           ----------------->AGL1                                                         >>>>>>>>>>WRKY43                                                         >>>>>>>>>>WRKY26                --------->TOE2(3)                <----------DOF2                --------->TOE1(3)         <-----------GT1>>>>>>>>>>WRKY38                     <------           ------->GAMYB           <---------TOE2(3)    --------->WRKY38(1)                  ------>ZmHOX2a(2)        --------->MYB52(1)         <---------TOE1(3)--------->ATHB12                    <---------WOX13(1)   atttagttcataaccgagccttaaacaaattcaatttcaggtttttaccttctttgatttgaccaaaaggagagaacaattgcctcagagattgatctgt  16924100                                                                                                 <---                                                                                                 <---                                                                                             --------                                                      ------------------------>ANAC81     --------->TOE1(1)                                                  ---------->DOF2                <-----------GT1<----                                             --------->ANAC58            ---------->DOF2  --------->TOE2(1)       --------->At4g35610                   ----------->GT1          --------->YAB1     ------------ -----RAV1(1)  --------->AtLEC2              --------->ANAC58  ----------------->AGL2    <-----------   ggtataagcagataaccctgcaagagaacaatttcagaaaccagagcaagtaaaaagagcaagagactaaaatcagaaagaagaaaccattctcgtactg  16924200            --------->At4g35610 ------ANAC58      --------->GLK1(2)                    <---------LBD16 ------ANAC58     <---------GLK1(2)                   --------->GLK1(1) ->SPL7     <---------ZAT2                            <---------GLK1(1)                ----------->GT1 -----At4g35610 ----------->ARR10     --------->ZAT6 <---------ARR14(2)         <----------DOF2 --->AtSPL3 --------->ZAT2       --------->TOE2(3)   --------->ARR14(2)    ---------->DOF2 ----AtSPL3 <---------At4g35610  <----------DOF2--------->MYB52(1)      --------->YAB1<---------TOE1(2)   cttacgaagagttgagctgagattctcttagccatctttaacagtaatccaaacggatttcggaaatgactcaaaaataaagcttttctaggttaaatgc  16924300                                                --------->DEAR3(1)                                            --------->DEAR3(2)                                           --------->MYB52(1)              <---------MYB52(1)         ------->GAMYB           <------NtERF2              ------>MYB46(1)          ------>NtERF2               ------>MYB83         <---------DEAR3(1)         --------->MYB46(3)         --------->DEAR3(1)         <---------MYB55(2)         --------->ANAC46          *TSS --------->ANAC58        --------->ATERF1(1)        --------->ANAC46       <---------ATERF1(1)         --------->ANAC58      ----------->HVH21            --------->ANAC58      <---------DEAR3(1)         --------->GLK1(1)     --------->SPL7             <---------GLK1(2)------>NtERF2                             --------->ATHB12    ------>NtERF2               --------->ARR14(2)                                 ------->GAMYB   <---------SPL7 --------->HSFB2a(2) --------->MYB52(1)                          <---------MYB52(2)   --------->ZAT18<---------HSFB2a(2)--------->MYB55(1)                ----------->GT1    <-------TEIL   ----------->HVH21            <---------ARR14(2)             --------->TOE1(2)  <---------MYB55(2) <---------At4g35610<---------At4g35610 --------->ANAC46 <---------AHL20(2)       --------->MYB46(3) --------->At4g35610--------->At4g35610 --------->ANAC58 --------->AHL20(2)       <---------MYB111(2)   tcgagcggacgacgccgttttcagaagaaacacagatacccaacgaaacgacgacgtttttaaatgctgcgagaggctaattcaacaaccgattcatttg  16924400                                           --------->ANAC55(2)                                           <---------ANAC58                                           <---------ANAC58                 ------>ZmHOX2a(2)                                         <-----------GT1                   <------ZmHOX2a(2)                                 ---------->DOF2<---------WOX13(1)        <---------ARR14(2)       --                              --------->At4g35610                         --------->ARR14(2)       --        ----------->GT1       <---------At4g35610                   <---------GLK1(1)          ------ --------->ZAT14  --------->At4g35610<---------ARR11(3)        ---------->DOF2         <-----------GT1 <---------ZAT14  <---------At4g35610--------->ARR11(3)      <---------TOE2(3)       <---------WOX13(1)   cagtgaagaagagataatttagcagacgtttcagcaaaagattttacttgatagatttgatttaagaaagaaatcggatccgatttgattaacatcgcaa  16924500                                       --------->YAB1                                       ------->GAMYB                                    ------->GAMYB        --------->MYB52(1)         --------->MYB46(3)                                  <------ZmHOX2a(2)     --------->ANAC46              <---------MYB55(2)                                  --------->CCA1(2)     --------->ANAC58              <---------MYB111(2)                                --------->AGP1     --------->ANAC58        <---------WRKY38(1)                                      --------->ARR14(2) ------->ANAC58       ---------->DOF2 --------->MYB46(3)        <-----------GT1       <---------ARR14(2) ------->ANAC58     <------ZmHOX2a(2)-------->P         --------->TOE1(3)             <---------ARR11(3) ----->RAV1(1)--------->GLK1(1) --------->MYB46(3)      --------->TOE2(3)             --------->ARR11(3)   caagaaaacgaaacagaaatcgatcaaagagtcaacaacaaccatcaaatctaaaaaaccctaattttacaaacatcgatttcaacaagatccacaattc  16924600                         --------->MYB52(2)                      <----------DOF2                    ------>NtERF2                   --------->DREB2C(2)                   --------->DEAR3(1)                  --------->ATERF1(1)                                                           -----                  --------->DEAR4(2)                           <------ZmHOX2a(1)         --------->ARR14(2)                 <---------ATERF1(1)                  --------->At4g35610                ------->TEIL                 <---------At5g28300                  --------->ZAT2                    <---------GLK1(2)                <-----------GT1                       <---------ZAT2            --------->At4g35610                <---------WRKY38(1)                   <---------At4g35610       --------->ZAT14------              <-----------HVH21                      --------->ANAC58          ------->GAMYB <-------          --------->TOE2(3)                          --------->ANAC58       --------->MYB52(1) ------   aagagctagtaaacttagtcaccgccttagttccttcagaaacagcatgtttcgcaagctcaccaggaagaacaagtctaacagcagtctgaatctcccg  16924700                    --------->YAB1                   <---------YAB1                <---------YAB1           <---------At4g35610          ------>NtERF2                          ------>NtERF2 ---->LBD16<------NtERF2                  --------->GLK1(2)     --------->ARR11(3) --------------->WRI1 <-----------GT1   --------->HSFB2a(1) ---------->DOF2  ------->TEIL      <----- --LBD16 <---------DEAR3(1)     --------->ZAT2--------->At4g35610    <-------GAMYB     <---------ICU4 --->LBD16<---------DEAR3(2)    <---------ZAT2<---------At4g35610   <---------ANAC46--------->YAB1 <-   agaagtaatcgtcggcttcttattatacctcgcgagcttcgacgattccgatgccaatttctcaaagatgtcgttgatgaaactgttcataatccccata  16924800  Previous    Next  AGI:  At3g46020.1    Description:  RNA-binding protein, putative. similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT5G59860.1); similar to RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] (GB:ABN06003.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 16923329    to: 16924335    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g46030.1    Description:  HTB11; DNA binding. Identical to Histone H2B.7 [Arabidopsis Thaliana] (GB:Q9LZT0); similar to HTB9, DNA binding [Arabidopsis thaliana] (TAIR:AT3G45980.1); similar to unknown [Populus trichocarpa] (GB:ABK93993.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96597.1); similar to unknown [Picea sitchensis] (GB:ABK25288.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2B; (InterPro:IPR000558) Range:  from: 16924433    to: 16925116    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.