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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-----
<------
--------
<---------
ICU4
<-------
--------->
YAB1
---------
--------->
CCA1(2)
------>
ZmHOX2a(2)
----------->
ARR10
<------
ZmHOX2a(2)
<---------
At4g35610
<---------
ICU4
--------->
ARR11(3)
--
AHL20(2)
<---------
ARR14(2)
<---------
GLK1(2)
<---------
ARR11(3)
-
AHL20(2)
<---------
ARR11(3)
--------->
YAB1
---------->
ID1
<---------
YAB1
>
AHL20(2)
--------->
ARR11(3)
--------->
ANAC58
--------->
TOE2(3)
--------->
AGP1
-
AHL20(1)
--------->
ARR14(2)
--------->
ANAC58
--------->
REM1(1)
<---------
AGP1
tgaatactcagaagatttgatcatgaactactgaaacaacgtttttggccaagaaataagaatttctacatcaaatttgtccatatagatcttatgatca
15717600
--------->
ANAC58
<---------
DAG2
<---------
ANAC55(1)
--------->
WRKY12
------->
TEIL
<---------
ANAC58
<-------
TEIL
--------->
ANAC46
----
ICU4
--------->
SPL7
--------->
ANAC58
-
---
YAB1
<---------
ANAC58
<---------
LBD16
<---------
ANAC46
--
->
ARR11(3)
<---------
ANAC58
--------->
LBD16
<---------
ANAC58
--
--
ARR11(3)
<---------------
AtSPL8
----------->
HVH21
<-------
>
YAB1
<----------
DOF2
<----------
DOF2
----------->
GT1
------>
ZmHOX2a(1)
ttttcacaaacaaggtttcaatgcttttgggtacgttgaactttttccacggacgttgtaataccgtgtgaagttttattcatgtcctcttgttttttcc
15717700
---------->
DOF2
------>
MYB83
-------
------>
MYB46(1)
---------
--------->
AtLEC2
---------
------->
GAMYB
<---------
WOX13(1)
<--------
--------->
MYB46(3)
<---------
AHL20(2)
<----------
DOF2
<---------
ANAC55(2)
--------->
AHL20(2)
<-----------------
AGL3
--------->
ANAC55(2)
--------->
AHL20(1)
<---------
DAG2
<---------
ANAC55(1)
<---------
AHL20(2)
<---------
ATHB12
------>
ZmHOX2a(2)
<---------
ANAC46
------>
ZmHOX2a(2)
--------->
MYB46(3)
<
------>
GAMYB
<---------
ANAC58
<------
ZmHOX2a(1)
--------->
AHL20(2)
--------->
WOX13(1)
<------
ZmHOX2a(2)
------->
ANAC58
<-----------
GT1
--------->
ARR11(3)
--------->
GLK1(2)
<--------
------->
ANAC58
<---------------------
WRI1
<---------
ARR11(3)
--------->
HSFC1(2)
<------
ZmHOX2a(1)
----
GT1
<---------
ANAC58
=====================
HOX2a_HOX2a
--------->
HSFB2a(1)
<---------
TOE2(3)
aacgaaatactaagttacgtctaaccatccaaagaggaacaatgtatgatctaaattaattgaaaattcgaagaatccaatcacctttttttaggatctt
15717800
----------->
GT1
---------->
DOF2
---->
GT1
<-----------
GT1
>
ARR11(3)
--------->
TOE2(3)
>
ARR14(2)
----------->
GT1
--------->
TOE1(3)
-
ARR11(3)
--------->
ANAC46
------->
TEIL
<---------
MYB59
--------
---------
ICU4
--------->
ANAC58
------->
TEIL
--------->
ICU4
--------->
TOE2(3)
-
ARR14(2)
--------->
ANAC58
----------->
HVH21
<---------
YAB1
--------->
TOE1(3)
-
aaaaattagaaagaaaaaaaacaagacagaaaaaactagtgaccgatggatgtgaatctctaagtcaagattagtaaacctaaacttaaccttctacgaa
15717900
---------->
DOF2
--------->
AHL20(2)
--------->
LBD16
--------->
YAB1
------>
NtERF2
<---------
YAB1
--------->
ANAC58
--------->
ALFIN1
---
==================================================================================================
<---------------
AGL15
--------->
ANAC46
----------->
TBP
---
--------------->
AGL15
--------->
ANAC58
--------->
CCA1(2)
------------>
CBF
<---------
->
ANAC46
--------->
SPL7
--------->
ARR11(3)
----------->
GT1
*
TSS
<-----------
GT1
-------->
GLK1(2)
<-----------
HVH21
<---------
ARR11(3)
----------->
GT1
--------->
AHL20(2)
---
aaattctattataagttcccactaatcgtcccgccattttaaaaagatataaaaccgtggggagaagtagaaataaaaac
aataaaacaattaacaaaac
15718000
--------->
DAG2
---------->
DOF2
<----------
ID1
--------->
MYB52(1)
------>
ANAC58
<---------
MYB52(1)
======
MADS_MADS
---------->
ID1
<-------
TEIL
------>
ANAC58
<-----------
GT1
--------->
GLK1(2)
------
AGL15
--------->
ANAC58
---------->
DOF2
<
-------->
GT1
--------->
ANAC58
--------->
TOE2(3)
----------->
GT1
<--
aagaaaaaacgaaaagcatgcaattgtttttcgttttttgttgaaacaaaaaacaaacttaacttcaccaaaaaaactacagaaaaaaaaagattcagtt
15718100
<---------
YAB1
--------->
AHL20(2)
--------->
YAB1
<---------
YAB1
<---------
ALFIN1
<---------
ICU4
-
---------->
ID1
<---------
YAB1
<----------
DOF2
--------->
ICU4
--
<----------
DOF2
<---------
AHL20(2)
--------->
YAB1
<------
ZmHOX2a(1)
----------
DOF2
--------->
AHL20(2)
--------->
ICU4
---------->
DOF2
---
----------------------
ANAC81
--------->
ALFIN1
--------->
YAB1
<---------
ATHB12
<---------
TOE2(3)
<---
tccttttctttgtctccacttcttatataagagttgggcatttttattacaaacataacttttgaaatc
atggctaattataaaggaagaggaaatgtta
15718200
--------->
ANAC55(2)
--------->
ANAC46
<---------
ANAC46
<---------
ANAC55(2)
<---------
ANAC58
<---------
ARR14(2)
<---------
LBD16
--------->
YAB1
--------->
ARR14(2)
-------->
CCA1(2)
<---------
bZIP60(1)
--------->
YAB1
------>
MYB46(1)
------->
ARR11(1)
--------->
bZIP60(1)
<-----------
HVH21
<-----------
GT1
------>
YAB1
<---------
ANAC58
<---------
ANAC58
<----------
DOF2
<----------
DOF2
------
YAB1
<---------
ANAC58
<---------
ICU4
--------->
YAB1
---------->
DOF2
------>
MYB83
tgatacggagcatgttattgggtctctatggcatcataaacattgtgtgtgtcaatggtactttcataaactacaaagatgctttaaccaaatccctcat
15718300
<---------
ETT(2)
--------->
AtLEC2
--------->
AtLEC2
<---------
HSFB2a(2)
--------->
ANAC58
<---------
ANAC46
--------->
ZAT14
--------->
ANAC58
<---------
AtLEC2
--------->
At4g35610
<------
ZmHOX2a(2)
-------->
HAHB4
<---------
At4g35610
========================
HOX2a_HOX2a
----------->
HVH21
--------->
ARR11(3)
--------->
YAB1
----------->
GT1
<-
<---------
ARR11(3)
<---------
YAB1
--------->
At4g35610
<-
---------->
DOF2
------>
ZmHOX2a(1)
<---------
At4g35610
--
cttcttggaggctcaaagatcaggcaaactccctcctaataatagggttccatggagaggtgactctgctctcgacgatggcaaactcgtaaat
gtaagt
15718400
------
--------->
ARR11(3)
--------->
ZAT18
<----
---------->
DOF2
<---------
ANAC55(2)
<-------
--------->
YAB1
----------->
GT1
<---------
YAB1
<---------
HSFB2a(2)
--------
TOE2(3)
--------->
ICU4
<---------
TOE2(3)
--------->
ICU4
<---------
ZAT18
-----
--------
TOE1(3)
<---------
YAB1
<---------
TOE1(3)
--------->
ICU4
<---------
AtMYB61
<------
------->
MYB59
<---------
TOE2(3)
<---------
GLK1(2)
<---------
ARR11(3)
------->
TEIL
--------->
HSFB2a(2)
ttaggttatattacaaataatgtttattcataaatcagattttaaggttacaaaagataatgagataattatgtatgtatag
gtggacttgtctggaggg
15718500
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AGI:
At3g43860.1
Description:
ATGH9A4 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A4); hydrolase, hydrolyzing O-glycosyl compounds. Identical to Endoglucanase 16 precursor [Arabidopsis Thaliana] (GB:Q8VYG3;GB:Q9LZG2); similar to ATGH9B13 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B13), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT4G02290.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82881.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43895.1); contains InterPro domain Six-hairpin glycosidase-like; (InterPro:IPR008928); contains InterPro domain Six-hairpin glycosidase; (InterPro:IPR012341); contains InterPro domain
Range:
from: 15717981
to: 15720776
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.