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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
---------->
DOF2
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
CCA1(2)
--------->
AGP1
--------->
ANAC58
>>>>>>>>>
GATA-2
--------->
ANAC58
<---------
ARR11(3)
------------------------>
ANAC81
------->
GAMYB
>>>>>>>>>
GATA-1
------>
MYB46(1)
--------->
MYB46(3)
>>>>>>>>>
GATA-3
------>
MYB83
--------->
TOE1(3)
--------->
ARR11(3)
<---------
MYB59
--------->
AHL20(2)
--------->
TOE2(3)
>>>>>>>>>
GATA-4
<---------
YAB1
<---------
AHL20(2)
---
ANAC58
--------->
GLK1(1)
--------->
GLK1(2)
--------->
YAB1
-
---
ANAC58
<-------
TEIL
---------->
DOF2
<---------
GLK1(2)
<---------
ATHB12
------
---
ANAC46
------->
GAMYB
<---------
ZAT14
----------->
ARR10
--------->
WOX13(1)
<--------
gaaacattaacaaccaagttcatatgggagtaaagagatctaaagatgaataagattcttataccaaattcaatcatattaaaacagagtatagctttaa
9987500
----------->
RAV1(2)
--------->
MYB46(3)
<---------
At4g35610
--------->
REM1(1)
<----------
DOF2
--------->
ARR14(2)
--------->
ATHB12
--------->
GLK1(2)
<--------
HAHB4
<---------
ARR14(2)
--------->
TOE1(3)
--------->
At4g35610
<---------
GLK1(2)
--------->
TOE2(3)
------->
TEIL
--------->
ARR14(2)
------>
TEIL
<---------
ANAC58
<---------
At4g35610
---->
DOF2
<---------
ANAC58
------->
TEIL
------>
ZmHOX2a(1)
----------->
RAV1(1)
--
DOF2
<---------
ATHB12
<---------
At4g35610
----------->
GT1
----------->
ARR10
agaac
cttgaatcatttgctttgcatctgagatgctatgaaactgagataactcgagtaaaactcctccccatctagtcagatt
ctgcaacaacaagaac
9987600
<-----------
GT1
------->
TEIL
<---------
MYB52(1)
--------->
GLK1(2)
<-------
TEIL
--------->
ARR14(2)
--------->
ARR14(1)
<---------
ARR14(2)
<---------
GLK1(2)
<------
ZmHOX2a(2)
--------->
YAB1
--------->
ARR14(2)
--------->
GLK1(1)
<---------
ICU4
<---------
ARR14(2)
<---------
GLK1(1)
--------->
ICU4
--------->
ARR11(1)
---------->
DOF2
<---------
GLK1(2)
------
---------->
DOF2
<----------
DOF2
--------->
YAB1
<------
ZmHOX2a(2)
<---------
ATHB12
<-------
aaaaaatcaaaaagattcgtttttttctttctgccatcgaatcacaaagcagagatcagatcgaactgaatctgaaatcatgaaatgaagagaaaactaa
9987700
-
<----
<----
<------
MYB83
--------->
ARR14(2)
<---------
ANAC58
<---------
ARR14(2)
<---------
ANAC58
<---------
ARR11(1)
<---------
ANAC46
<---------
CCA1(2)
<---------
ARR14(2)
<------
NtERF2
<---------
ANAC55(2)
---------->
DOF2
<--------
P
------>
NtERF2
<---------
ANAC58
<---------
At4g35610
<------
MYB46(1)
------>
ZmHOX2a(1)
--------->
LBD16
--------->
At4g35610
<---------
TOE1(2)
------->
TEIL
--------->
ARR14(2)
<---------
ANAC58
--->
MYB52(1)
--------->
ARR14(2)
---------->
ID1
<---------
ARR14(2)
--------->
ANAC55(2)
--
MYB52(2)
<------
ZmHOX2a(1)
<---------
RAP2.3(1)
--------->
YAB1
--------->
ARR14(2)
<
c
atcggcatctaaaggatttgacttgtaggtattttcggcgtcttgacgaatttgttcgaacaatagtatcctatcgaactcagtttccgtatccat
ggc
9987800
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
<---------
ATHB12
<------
NtERF2
------>
NtERF2
------------>
CBF
--------->
RRTF1(1)
<---------
ANAC46
--------->
RAP2.3(1)
<---------
ANAC58
--------->
LBD16
<----------
DOF2
--------->
DEAR3(2)
---------->
DOF2
<---------
ANAC58
<----------
DOF2
--------->
CCA1(2)
-------->
HSFB2a(2)
<---------
ANAC58
*
TSS
<---------
ARR14(2)
-----
ANAC58
--------------->
AtSPL3
----------->
GT1
--------->
MYB52(1)
-----
ANAC58
<----------
DOF2
<---------
ANAC58
<------
NtERF2
--------->
ARR14(2)
---------
HSFB2a(2)
<----------
DOF2
--------->
ANAC46
--------->
At4g35610
<------
NtERF2
ttctcaaagcttttcttctttcgtacaaaacttttggcttttcttctctcagacctcggcacagat
aaaaatcagataccggcgcaatgaaacgcagcgt
9987900
--------------->
AGL15
====================================================================
<---------
ANAC58
<---------
ANAC58
<---------
ANAC55(1)
<---------
ANAC46
<-------
TEIL
--------->
MYB52(2)
--------->
MYB52(1)
<--------
P
<------
------------>
CBF
<<<<<<<<<
MYB98
<---------
ALFIN1
<---------
ICU4
<------
--------->
ZAT18
<---------
YAB1
---------->
DOF2
--------->
ICU4
<------
<---------
ZAT18
--------->
YAB1
----------->
GT1
<---------
YAB1
--------->
AtLEC2
ttttttagtgggcttacaatgggcctattatgttacttgtattagtttgtaaaaagcccaacgtcttaatttcatgatggtaagtccattcaaatggctt
9988000
--------->
YAB1
<---------
AHL20(2)
--------------->
AGL15
<---------
ARR11(3)
<---------------
AGL15
<---------
AHL20(1)
----------------->
AGL3
<---------
CCA1(2)
<-----------------
AGL3
<-----------
GT1
----------------->
AGL2
<---------
AHL20(2)
<-----------------
AGL2
--------->
YAB1
--------
=================
MADS_MADS
--------->
ANAC58
<---------
AHL20(1)
<-------
---
ANAC46
--------->
GLK1(1)
--------->
AHL20(2)
<---------
AHL20(2)
---
ANAC58
<---------
GLK1(1)
<---------
AHL20(2)
--------->
YAB1
<---------
ICU4
---
ANAC58
<---------
WOX13(1)
--------->
ANAC58
--------->
AHL20(1)
<---------
GLK1(2)
<---------
YAB1
gtttccattaatagattgacatataacttggagttccatacccaaatgacaaaattatattccatatatttatcagattttattctaaaaatcactatag
9988100
<
----------->
GT1
-
------->
MYC3
-
<-------
MYC3
<
----------->
RAV1(1)
<---
--------->
MYB52(2)
------>
MYB46(1)
----
------->
TEIL
<-----------
HVH21
<---
<---------
YAB1
------>
MYB83
<---
--------->
AHL20(1)
--------->
ANAC46
----
<---------
AHL20(1)
<---------
ANAC58
<---------
ZAT2
-----
<---------
AHL20(1)
<---------
ANAC58
----------->
RAV1(2)
<----
<---------
ARR11(3)
--------->
ZAT2
=================
RAV
<----
--------->
ARR11(3)
<---------
At4g35610
<---------
At4g35610
--------->
CCA1(2)
->
ZAT14
<---------
TOE2(3)
<---------
ZAT2
--------->
At4g35610
--------->
ARR14(2)
--
ZAT14
<---------
AHL20(2)
--------->
At4g35610
--------->
ZAT2
<---------
ARR14(2)
ttttgaatatatattaatgaatgttagtcacaagtgatatgtgagcttgcaatgtgactaatctcacctgccacatgtaaaatcacagatatgaaacaat
9988200
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
YAB1
<---------
YAB1
---------
AHL20(2)
-------->
AHL20(2)
-------->
AHL20(1)
---------
AHL20(1)
-----
ATHB1
----->
AHL20(2)
------
ICU4
--------->
ARR11(3)
------
AHL20(2)
<---------
ARR11(3)
----->
ATHB51
--------->
DAG2
<---------
TOE2(3)
<--------
---->
ICU4
<---------
AHL20(2)
--------->
DAG2
<------
ZmHOX2a(1)
<-----------
RAV1(1)
-----
ATHB51
--------->
CCA1(2)
<---------
ANAC55(2)
<---------
YAB1
-----
ATHB12
---------->
DOF2
---------->
DOF2
---------->
DOF2
<----------
DOF2
aatttattattaaatatttgtaaagaagataagaggtttgcaaaaaggtagcatcacatgaaagaggattaagatgttcccttttattgttgttcttttt
9988300
-----
<----------
DOF2
--------->
ANAC58
--------->
ARR11(3)
-----
<---------
ANAC58
--------->
ANAC58
---------->
DOF2
-----
<---------
ANAC46
---------->
DOF2
--------->
YAB1
--------->
TOE2(3)
<---------
ANAC58
--------->
AHL20(2)
--------->
YAB1
--------->
YAB1
<---------
ANAC46
------------------------>
ANAC81
<---------
YAB1
>>>>>>>>>
MYB98
--
DOF2
<---------
YAB1
<---------
AHL20(2)
----------->
GT1
<---------
RVE1(1)
--
gttttgtgtgtgttattctttgaagaaacaattaaacaaaagccaaattgtatagtttataataaagatgtcgaatcaaactgatatttttaacataaac
9988400
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AGI:
At3g27080.1
Description:
TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3); P-P-bond-hydrolysis-driven protein transmembrane transporter. Identical to Mitochondrial import receptor subunit TOM20-3 (TOM20-3) [Arabidopsis Thaliana] (GB:P82874;GB:Q9LSC8); similar to TOM20-1 (TRANSLOCASE OUTER MEMBRANE 20-1) [Arabidopsis thaliana] (TAIR:AT3G27070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49013.1); contains InterPro domain Plant specific mitochondrial import receptor subunit TOM20; (InterPro:IPR010547)
Range:
from: 9986316
to: 9987866
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.