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   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                     ---------->DOF2
                                   ------>ZmHOX2a(2)
                                  <------ZmHOX2a(2)
                                  --------->CCA1(2)
                                 --------->AGP1
        --------->ANAC58         >>>>>>>>>GATA-2
        --------->ANAC58         <---------ARR11(3)             ------------------------>ANAC81
       ------->GAMYB             >>>>>>>>>GATA-1              ------>MYB46(1)
      --------->MYB46(3)         >>>>>>>>>GATA-3              ------>MYB83
 --------->TOE1(3)               --------->ARR11(3)         <---------MYB59 --------->AHL20(2)
 --------->TOE2(3)               >>>>>>>>>GATA-4      <---------YAB1        <---------AHL20(2)
---ANAC58                       --------->GLK1(1)  --------->GLK1(2)  --------->YAB1               -
---ANAC58      <-------TEIL---------->DOF2        <---------GLK1(2)  <---------ATHB12         ------
---ANAC46 ------->GAMYB    <---------ZAT14      ----------->ARR10  --------->WOX13(1)      <--------
 
gaaacattaacaaccaagttcatatgggagtaaagagatctaaagatgaataagattcttataccaaattcaatcatattaaaacagagtatagctttaa  9987500
                     ----------->RAV1(2)                                              --------->MYB46(3)
                     <---------At4g35610                                              --------->REM1(1)
               <----------DOF2                                                --------->ARR14(2)
        --------->ATHB12                                                      --------->GLK1(2)
        <--------HAHB4                                                       <---------ARR14(2)
 --------->TOE1(3)   --------->At4g35610                                     <---------GLK1(2)
 --------->TOE2(3)  ------->TEIL                                             --------->ARR14(2)
------>TEIL   <---------ANAC58                                              <---------At4g35610
---->DOF2     <---------ANAC58      ------->TEIL              ------>ZmHOX2a(1)     ----------->RAV1(1)
--DOF2 <---------ATHB12   <---------At4g35610      ----------->GT1         ----------->ARR10
 
agaaccttgaatcatttgctttgcatctgagatgctatgaaactgagataactcgagtaaaactcctccccatctagtcagattctgcaacaacaagaac  9987600
                    <-----------GT1                              ------->TEIL
               <---------MYB52(1)                                --------->GLK1(2)
            <-------TEIL                                         --------->ARR14(2)
           --------->ARR14(1)                                    <---------ARR14(2)
          <---------GLK1(2)                        <------ZmHOX2a(2)      --------->YAB1
          --------->ARR14(2)                     --------->GLK1(1)        <---------ICU4
          <---------ARR14(2)                     <---------GLK1(1)       --------->ICU4
          --------->ARR11(1)             ---------->DOF2        <---------GLK1(2)             ------
      ---------->DOF2  <----------DOF2--------->YAB1    <------ZmHOX2a(2)<---------ATHB12   <-------
 
aaaaaatcaaaaagattcgtttttttctttctgccatcgaatcacaaagcagagatcagatcgaactgaatctgaaatcatgaaatgaagagaaaactaa  9987700
                                                                                                   -
                                                                                               <----
                                                                                               <----
                        <------MYB83                                                   --------->ARR14(2)
                  <---------ANAC58                                                     <---------ARR14(2)
                  <---------ANAC58                                                     <---------ARR11(1)
                  <---------ANAC46                                                    <---------CCA1(2)
            <---------ARR14(2)       <------NtERF2                                  <---------ANAC55(2)
       ---------->DOF2<--------P    ------>NtERF2                                   <---------ANAC58
    <---------At4g35610 <------MYB46(1)                             ------>ZmHOX2a(1)--------->LBD16
    --------->At4g35610<---------TOE1(2)      ------->TEIL      --------->ARR14(2)  <---------ANAC58
--->MYB52(1)--------->ARR14(2)    ---------->ID1                <---------ARR14(2)  --------->ANAC55(2)
--MYB52(2) <------ZmHOX2a(1)     <---------RAP2.3(1)         --------->YAB1      --------->ARR14(2)<
 
catcggcatctaaaggatttgacttgtaggtattttcggcgtcttgacgaatttgttcgaacaatagtatcctatcgaactcagtttccgtatccatggc  9987800
                                                                                        --------->ANAC58
                                                                                        --------->ANAC46
                                                                                        --------->ANAC58
                                                                                   <---------ATHB12
                                                                                <------NtERF2
                                                                               ------>NtERF2
                                                                               ------------>CBF
                                                                             --------->RRTF1(1)
                 <---------ANAC46                                            --------->RAP2.3(1)
                 <---------ANAC58                                           --------->LBD16
      <----------DOF2                                                     --------->DEAR3(2)
 ---------->DOF2 <---------ANAC58 <----------DOF2                       --------->CCA1(2)
-------->HSFB2a(2)               <---------ANAC58                *TSS  <---------ARR14(2)
-----ANAC58     --------------->AtSPL3                    ----------->GT1--------->MYB52(1)
-----ANAC58   <----------DOF2    <---------ANAC58     <------NtERF2    --------->ARR14(2)
---------HSFB2a(2)         <----------DOF2          --------->ANAC46  --------->At4g35610   <------NtERF2
 
ttctcaaagcttttcttctttcgtacaaaacttttggcttttcttctctcagacctcggcacagataaaaatcagataccggcgcaatgaaacgcagcgt  9987900
                                --------------->AGL15
                                ====================================================================
                               <---------ANAC58
                               <---------ANAC58
                               <---------ANAC55(1)
                               <---------ANAC46                                  <-------TEIL
                              --------->MYB52(2)       --------->MYB52(1)   <--------P       <------
           ------------>CBF <<<<<<<<<MYB98             <---------ALFIN1<---------ICU4        <------
     --------->ZAT18      <---------YAB1        ---------->DOF2       --------->ICU4         <------
     <---------ZAT18    --------->YAB1     ----------->GT1            <---------YAB1--------->AtLEC2
 
ttttttagtgggcttacaatgggcctattatgttacttgtattagtttgtaaaaagcccaacgtcttaatttcatgatggtaagtccattcaaatggctt  9988000
     --------->YAB1                                           <---------AHL20(2)
 --------------->AGL15                                       <---------ARR11(3)
 <---------------AGL15                                       <---------AHL20(1)
----------------->AGL3                                      <---------CCA1(2)
<-----------------AGL3                                 <-----------GT1
----------------->AGL2                              <---------AHL20(2)
<-----------------AGL2                             --------->YAB1                           --------
=================MADS_MADS          --------->ANAC58<---------AHL20(1)                      <-------
---ANAC46                   --------->GLK1(1)      --------->AHL20(2)      <---------AHL20(2)
---ANAC58                   <---------GLK1(1)      <---------AHL20(2)--------->YAB1  <---------ICU4
---ANAC58  <---------WOX13(1)       --------->ANAC58--------->AHL20(1)  <---------GLK1(2) <---------YAB1
 
gtttccattaatagattgacatataacttggagttccatacccaaatgacaaaattatattccatatatttatcagattttattctaaaaatcactatag  9988100
                                                                                                   <
                                                                       ----------->GT1             -
                                                                      ------->MYC3                 -
                                                                      <-------MYC3                 <
                                                                   ----------->RAV1(1)          <---
                     --------->MYB52(2)                          ------>MYB46(1)                ----
                ------->TEIL                                     <-----------HVH21              <---
             <---------YAB1                                      ------>MYB83                   <---
      --------->AHL20(1)                                        --------->ANAC46                ----
      <---------AHL20(1)                 <---------ANAC58     <---------ZAT2                   -----
    <---------AHL20(1)                   <---------ANAC58     ----------->RAV1(2)              <----
    <---------ARR11(3)                  --------->ZAT2        =================RAV             <----
    --------->ARR11(3)                  <---------At4g35610   <---------At4g35610    --------->CCA1(2)
->ZAT14     <---------TOE2(3)           <---------ZAT2        --------->At4g35610   --------->ARR14(2)
--ZAT14  <---------AHL20(2)             --------->At4g35610   --------->ZAT2        <---------ARR14(2)
 
ttttgaatatatattaatgaatgttagtcacaagtgatatgtgagcttgcaatgtgactaatctcacctgccacatgtaaaatcacagatatgaaacaat  9988200
       <---------AHL20(2)
      <---------AHL20(2)
      --------->AHL20(2)
     <---------YAB1
  <---------YAB1
---------AHL20(2)
-------->AHL20(2)
-------->AHL20(1)
---------AHL20(1)
-----ATHB1
----->AHL20(2)
------ICU4                                                           --------->ARR11(3)
------AHL20(2)                                                       <---------ARR11(3)
----->ATHB51                             --------->DAG2            <---------TOE2(3)       <--------
---->ICU4 <---------AHL20(2)            --------->DAG2        <------ZmHOX2a(1)    <-----------RAV1(1)
-----ATHB51              --------->CCA1(2)          <---------ANAC55(2)           <---------YAB1
-----ATHB12      ---------->DOF2       ---------->DOF2  ---------->DOF2      <----------DOF2
 
aatttattattaaatatttgtaaagaagataagaggtttgcaaaaaggtagcatcacatgaaagaggattaagatgttcccttttattgttgttcttttt  9988300
                                                                                               -----
              <----------DOF2       --------->ANAC58           --------->ARR11(3)              -----
  <---------ANAC58                  --------->ANAC58       ---------->DOF2                     -----
  <---------ANAC46                ---------->DOF2          --------->YAB1                 --------->TOE2(3)
  <---------ANAC58          --------->AHL20(2)          --------->YAB1                   --------->YAB1
<---------ANAC46      ------------------------>ANAC81  <---------YAB1                   >>>>>>>>>MYB98
--DOF2     <---------YAB1   <---------AHL20(2)   ----------->GT1                <---------RVE1(1) --
 
gttttgtgtgtgttattctttgaagaaacaattaaacaaaagccaaattgtatagtttataataaagatgtcgaatcaaactgatatttttaacataaac  9988400
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AGI:  At3g27080.1   
Description:  TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3); P-P-bond-hydrolysis-driven protein transmembrane transporter. Identical to Mitochondrial import receptor subunit TOM20-3 (TOM20-3) [Arabidopsis Thaliana] (GB:P82874;GB:Q9LSC8); similar to TOM20-1 (TRANSLOCASE OUTER MEMBRANE 20-1) [Arabidopsis thaliana] (TAIR:AT3G27070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49013.1); contains InterPro domain Plant specific mitochondrial import receptor subunit TOM20; (InterPro:IPR010547)
Range:  from: 9986316    to: 9987866    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.