Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <----------DOF2                                             --------->GLK1(2)                     --------->YAB1         <---------GLK1(2)               --------->YAB1            <-------TEIL <------ZmHOX2a(1)              <---------ATHB12          --------->CCA1(2)                        <-----------RAV1(1)             ------>MYB46(1)            --------->ARR14(1)                      <---------YAB1             ------>MYB83              <---------ARR14(2)                   --------->TOE2(3)      ==        <-----------GT1                --------->ARR11(1)                   <----------DOF2        -- ---------DOF2--------->MYB46(3)       --------->ARR14(2)                   <---------DAG2     ------ >GLK1(2)   --------->WOX13(1)        --------->CCA1(2)                <----------DOF2         ------   tcttttgttttcaccaatcaccatcttaacttgagaagagagatacgattcttttaggagttttagtcttcgtctttgccttattgttgctcaataacct  8672400                        --------->O2                        <---------TGA1a                        --------->TGA1a                        <---------O2                     --------->ZAT18                     <---------ZAT18        --------->ANAC58      <-----------GT1<---------ZAT14   --------->ANAC46 =================================bZIP_DOF  --------->ANAC58                                   <----- -------->DOF2     --------->ZAT14   <---------ANAC55(2)                                   <--------- --->TOE2(3)       <---------ZAT14   --------->ANAC55(2)                     --------->ATHB12  <----- --->TOE1(3)       <---------ZAT18 <-----------GT1                   ------>ZmHOX2a(1)   <---------YAB1   caaaagttttacaataaacagagcacacttggcaatgttacgagacacactattagcatcaacaaattttcctaaggcatcatttgtgtttgtcattgct  8672500                               ------>MYB46(1)                               ------>MYB83            ----------->TBP                             --------->DEAR3(1)        --------->AHL20(2)                            --------->DEAR3(2)         <---------AHL20(2)                            --------->MYB46(3)       ----------->TBP    <-----------RAV1(2)   <-----------GT1          <-----------TBP    ===========================RAV                 <---------AHL20(2)  <-----------HVH21      ---------->DOF2           --------->AHL20(2) ----ANAC58           --------->YAB1             <-----------TBP ---CBF             ------------>CBF       <---------At5g28300       <-------TEIL       <---------ARR11(3) ----ANAC58        ----------->RAV1(1)    <-----------GT1    --------->ANAC46           --------->ARR11(3)   tctggttcaggtctggtactccaacaataaaccgacccttcaaattacagtatttatatatatacccaagtttcatcgtagttaaaccaagatttagcaa  8672600                                                                                             <-------                                                                                            >>>>>>>>>EIN3                                                                                   --------->LBD16                                                                                   ----------->GT1                                                                                  <---------ANAC46            --------->MYB52(1)                                                   <---------LBD16          <---------MYB52(2)                                                --------->ARR11(3)       --------->MYB46(3)                                                   <---------ARR11(3)       <---------MYB55(2)                                                   --------->AHL20(1)      -------->P               --------->MYB52(1)                           <---------AHL20(1)  --------->ANAC58     ----------->RAV1(1)             <---------At5g28300  <---------AHL20(2)  --------->ANAC46     ------->TEIL     --------->TOE2(3)                   --------->AHL20(2)  --------->ANAC58   --------->ZAT18   <----------ID1 <-----------GT1 ----------->GT1      <-------TEIL   aattaagcaaccactaactgaaatgcaccaaaaaaacgaaaaccacaaaatccaaattaccatgaaatcgaactgaaatatattccggttatatacattg  8672700                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                              ------>NtERF2                                                      <----------DOF2                        --------                 ------>MYB83                <---------MYB52(1)         <---------ETT(2) --------->ARR14(2)                 ------>MYB46(1)          <---------LBD16               --------->ETT(2) <---------ARR14(2)               <---------MYB59         <---------At4g35610              --------->WRKY38(1) <--------          --------->ARR11(3)    --------->ICU4<---------MYB52(1)     --------->ALFIN1 <---------ANAC46  --------->MYB52(1)            <---------YAB1<--------P  <---------TOE2(3)           <---------ANAC58 -----CBF <---------ARR11(3)  --------->YAB1--------->LBD16<-----------RAV1(1)        <---------ANAC58   acacaaaccgaagataaccaaactattttcagttataattcatctccggttagcatctttgatgttgtcgagtgtcgaccatggcattgcgtttcccgcc  8672800                                                       --------->At4g35610                                                       <---------At4g35610                                                      <---------ARR14(2)                                                      --------->ARR14(2)                                                     <---------CCA1(2)                                                    <---------MYB52(1)                                                ------>NtERF2                                               <---------ALFIN1                                              <---------ABI4(2)            ------->TEIL                                              <------NtERF2                <---------ARR11(1)            ----------->RAV1(2)              --------->LBD16               --------->ARR14(2)            --------->ZAT2    <------NtERF2  ------>NtERF2                 <---------ARR14(2)       -     ------>ZmHOX2a(1)        --------->At4g35610<------NtERF2             --------->GLK1(2)      --- -------O2  <---------ZAT2  <---------ANAC46 <-----------HVH21 --------->GLK1(2)                  <-- ------>O2  --------->At4g35610              <---------ATERF1(1)   --------->LBD16               ---- ------>TGA1a              <------NtERF2    --------->ANAC46  --------->ARR14(2)                <---- ->ANAC46   <---------At4g35610             --------->LBD16   <---------GLK1(2)             --------- -LBD16   <-----------RAV1(2)------>NtERF2 <---------LBD16    <---------ARR14(2)      <-----------GT1   tcgtctcctctctcagctgaagctatctcggcgtctgaattctctcccggcaccggtatctgaagattccgaagacgaatctttaaaattcccatccaat  8672900                                                                          <---------At4g35610                                                                          <---------ZAT2                                                                          --------->ZAT2                                    ----------->GT1                       --------->At4g35610                                  <---------ZAT18                     --------->ANAC58                                  --------->ZAT18<------NtERF2        --------->ANAC46                                 ------------>AtMYB77                 --------->ANAC58 ----->ZmHOX2a(2)          ------>ZmHOX2a(2)    --------->LBD16     <---------ALFIN1 ------>ARR11(3)         <---------ARR11(3)     ------>NtERF2    --------->ANAC46 -------ARR11(3)         --------->ARR11(3)    --------->ANAC46  --------->REM1(1) ----->YAB1             --------->YAB1        <---------LBD16  <-----------GT1               <------- -----ATHB12           --------->ICU4<-------GAMYB             <---------HSFB2a(2)     --------->ZAT14 >MYB46(3)             <---------ATHB12  <----------TaMYB80    --------->HSFB2a(2) <---------------AtSPL8   gatcttcttctccgaacgagtagcaatgatctcgagggcagttatattcccgccgatagacgtttctacaacacgctgctgaagaaatgtacagtcttta  8673000                   ========================HOX2a_HOX2a                   ------>ZmHOX2a(2)                 <---------ARR14(2)                 --------->ARR11(3)                 <---------ARR11(3)                 --------->ARR14(2)                <------ZmHOX2a(1)               <---------HSFB2a(1)               --------->HSFC1(2)               <---------HSFC1(2)   ------>ZmHOX2a(1)               --------->HSFB2a(1) --------->TOE2(3)   <---------------AGL15           --------->TOE1(3)   --------------->AGL15        <---------ARR14(2)             <---------YAB1   ==================================================================================================  <-----------------AGL2        --------->ARR14(2)     ----------->HVH21                           <-  <-----------------AGL1       --------->GLK1(1)     <---------ICU4      <---------ALFIN1     <------ ---DOF2 <---------LBD16       <---------CCA1(2)   <-----------TGA1    ----------->RAV1(1)------->TEIL   agttgctcattcagggaaggatcgttcatgctcatatccttcaatctatctttcgtcatgacattgttatgggcaacactcttctcaatatgtatgctaa  8673100                                                           <---------ANAC58                                                           <---------ANAC58                                                           <---------ANAC46                                                          --------->MYB52(2)             <------ZmHOX2a(1)                     --------->GLK1(2) --------->LBD16       --------->DAG2             <---------ARR11(3)                             ---- =========MADS_MADS   ---------->DOF2             --------->ARR11(3)                          ------- --------LBD16  <---------At4g35610               <---------GLK1(2)       <---------GLK1(1)  <------- ---------AGL15 <---------ZAT2                   <---------RVE1(1)   <----------DOF2  --------->ANAC46   atgcggaagtttggaggaagctcgtaaagtgttcgaaaaaatgcctcagagagattttgttacttggactactttgatttctggttactcgcagcatgat  8673200                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                           <---------                                                                                       <---------At4g35610                       <---------AHL20(2)                        <----------DOF2       --------->ZAT2                <----------DOF2                              --------->ZAT18           --------->At4g35610            <---------MYB52(1)         --------->CCA1(2)     --------->ZAT14        <---------At4g35610 -->ZmHOX2a(2)  <---------DAG2      ----------->ARR10        <---------ZAT14        <---------ZAT2 -->ATHB12<---------ANAC58          <---------TOE2(3)        <---------ZAT18     ---------->DOF2 --YAB1   <---------ANAC58    --------->ARR11(3)        <---------ATHB12  <---------ZAT6  <---------At4g35610   cgaccttgtgatgcgttacttttttttaatcagatgttgagatttggatatagtcccaatgagttcactttgtctagtgtgatcaaagctgctgcagctg  8673300  Previous    Next  AGI:  At3g23990.1    Description:  HSP60 (Heat shock protein 60); ATP binding / protein binding / unfolded protein binding. Identical to Chaperonin CPN60, mitochondrial precursor (CPN60) [Arabidopsis Thaliana] (GB:P29197;GB:Q9LIQ8); similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT3G13860.1); similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT2G33210.1); similar to GroEL-like chaperone, ATPase [Medicago truncatula] (GB:ABE86688.1); similar to Chaperonin CPN60-2, mitochondrial precursor (HSP60-2) (GB:Q05046); similar to Chaperonin CPN60-1, mitochondrial precursor (HSP60-1) (GB:Q05045); contains InterPro domain Chaperonin Cpn60; (InterPro:IPR001844); c Range:  from: 8668925    to: 8672585    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g24000.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G23330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23685.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70212.1); similar to pentatricopeptide, putative [Oryza sativa (japonica cultivar-group)] (GB:ABB47711.2); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 8672781    to: 8674682    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.