AthaMap

Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved TF binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
<-------MYC2 <-------PIF5 ------->MYC3 <-------MYC3 ------->PIF4 <-------PIF4 ------->MYC2 ------->PIF5 ------->MYC4 <-------MYC4 --------->ANAC58 <---------TGA1a <---------ANAC55(2) <---------AHL20(2) --------->ANAC58 --------->AHL20(2) --------->TGA1a --------->AHL20(1) --------->O2 <---------AHL20(1) ==========================================bZIP_DOF ---------->DOF2 <---------O2 --------->AHL20(2) *TSS ==============================================bZIP_DOF ------>NtERF2 <---------TOE1(2) <----------DOF2 --------->ATERF1(2) <------------OsbHLH66 --------->AHL20(2) <---------ATERF1(2) ------->TEIL <---------ALFIN1 --------->RAP2.6(3) <-------TEIL <---------ZAT14 <----------DOF2 --------->MYB52(1) --------->ANAC58 --------->ZAT14 <-----------GT1 ----------->HVH21 --------->ANAC58 --------------->AtSPL8 <----------DOF2 ----->LBD16 =================================================bZIP_DOF <---------AHL20(2) ----At4g35610 ------->MYC3 --------->ZAT6 <---------AHL20(2) ----LBD16 <------NtERF2 <-------MYC3 <---------ZAT14 <------------------------ANAC81 --->At4g35610 --------->ANAC46 ============================bZIP_DOF
ggaagaattgacggcaaagaaggcaaacttattttttaagtcacatgcatcgcacgtgaacactgtaccactttaattttatttctttctttttctgtta	7445400
<-----------GT1 <---------AHL20(2) --------->ICU4 <---------YAB1 --------->AHL20(2) <---------AHL20(1) <---------AHL20(2) --------->AHL20(1) ----------->GT1 --------->YAB1 ---------->DOF2 --------->AHL20(2) <----------DOF2 ----------->TBP <---------AHL20(2) --------->ANAC58 --------------->AGL15 <---------AHL20(1) <----------DOF2 --------->ANAC58 <----------DOF2 <---------AHL20(2) <---------TOE2(3) --------->ATHB12 --------->TOE1(3) --------->AHL20(2) <----------DOF2 <-----------GT1 ---------->DOF2 --------->TOE2(3) --------->AHL20(2)<---------ICU4 ---------->ID1 <---------YAB1 --------->TOE2(3) <---------------AGL15 <---------AHL20(2)--------->YAB1 <-----------GT1 <---------AHL20(2)
aaaactttaaaaagaaaattagtttttaatttttttagaattataattactttaagtttttcttttttcaattgtttttattggaaagaaactttaatct	7445500
------>MYB83 ------>MYB46(1) --------->MYB55(1) <---------MYB46(2) <---------MYB59 <---------MYB111(1) --------->ANAC55(2) --------->AHL20(1) <---------YAB1 <---------AHL20(1) <---------AHL20(2) <---------------AGL15 --------->AHL20(2) <---------HSFB2a(2) ------>MYB83 --------->YAB1 --------->HSFB2a(2) --------->ZAT6 ------>ZmHOX2a(2) <---------YAB1 --------------->AGL15 ------>MYB46(1) <------ZmHOX2a(2) <---------ARR11(3) <----------DOF2 <---------ANAC55(2) --------->ARR14(2) --------->YAB1 <-----------GT1 <---------AHL20(2)<---------AHL20(2) <---------ARR11(3) --------->ARR11(3) <---------AHL20(2) --------->AHL20(2)--------->AHL20(2) --------->ARR11(3)--------->YAB1
gtattttcttactttctaaaaatattaaatacctaacaccaaatttatagtatctaaatccacgatcttaaacactcttaatgatattataatccaattc	7445600
<--- --------->HSFB2a(1) <---------HSFC1(2) <-----------GT1 --------->HSFC1(2) ------>MYB83 ----------->GT1 <---------HSFB2a(1) ------>MYB46(1) <---------ANAC58 <---------ANAC58 <-----------ARR10 --------->AtMYB61 <---------ANAC58 <---------ANAC58 <---------ARR14(2) <---------MYB59 <---------ANAC46 --------->ANAC58 --------->SPL7 --------->MYB46(3) <---------TOE2(3) <---------ALFIN1 <----------DOF2 ------->TEIL ----------->HVH21 <---------TOE1(3) --------->ANAC46 --------->ANAC58 --------->ARR14(2) <---------ETT(1) <---------DOF5.7(2) --------->ANAC58 --------->ANAC46 <---------CCA1(2) --------->DEAR3(2) --------->DOF5.7(2) ----------->RAV1(1) --------->ANAC58 <---------ANAC55(2)
agacccgaccaaacaaaaaacatggttaacgtgtaacaacacagagccacacaagtgcgagtgtattccacgctctttccatcaacgcgtaccttcgtct	7445700
<--------HAHB4 <---------ICU4 --------->YAB1 ------------>CBF <----------DOF2 <---------DAG2 <---------ANAC58 ------>ZmHOX2a(2) <----------DOF2 <---------ANAC58 --------->ARR11(3) <-----------GT1 <---------ANAC58 <-------TEIL --------->ATHB12 <-----------GT1 <---------ANAC58 <-----------GT1 *TSS ------>ZmHOX2a(1) <-- --------GT1 <-----------GT1 <---------ATHB12 ------->TEIL ===================HOX2a_HOX2a
taccattttaactttttttttttttcttgtttcttacaatcattttcacaaatctcttcgatgaagcttcattctcctcttgatttgatctctttgaaaa	7445800
<---------YAB1 --------->YAB1 ----------->GT1 <---------YAB1 <---------ICU4 --------->YAB1 <---------YAB1 <---------ICU4 --------->YAB1 --------->ICU4 <---------ATHB12 --------->ANAC58 ----------->GT1 --------->ANAC58 ---------->DOF2 <<<<<<<<<<WRKY18 --------->ARR11(3) <---------MYB52(2) --------->WOX13(1) --------->TOE1(2) ------->TEIL --------ID1 <---------ZAT6 --------->ICU4 <---------LBD16 -------->P <-----
acgacgaatcaaacaaaccctagagtcaagtcaatcatgatgataaatacaaacctggaagataaagaatcaaccttgtgaaaaaaaaaaaaaacttttg	7445900
--- --------->ANAC46 <-- --------->AtLEC2 --------->ANAC58 ===== --------->ANAC46 --------->ANAC58 ----- --------->ANAC58 --------->REM1(1)--------->ARR14(2) --------- --------->ANAC58 --------->At4g35610 <---------ARR14(2) <-------- ---------->DOF2 --------->HSFB2a(2) --------->DOF5.7(2)<---------MYB59 --------->HSFB2a(2) <---------HSFB2a(2) <---------ARR14(2) ----------->HVH21 ----YAB1 <---------HSFB2a(2) ------>ZmHOX2a(1) --------->ARR14(2) ------>ZmHOX2a(1)
attccctcttcttctaaaagccatgaaaccgattcaatctccttctggagtagcttcacctatgaagaaccgtttacgcaaacgtcctgacctaagctta	7446000
--------->bZIP60(1) --------->ANAC46 <- --------->DEAR3(1) <---------LBD16 ---- <---------DEAR3(1) ------>ZmHOX2a(1) <- --------->bZIP60(2) ===============HOX2a_HOX2a <---------bZIP60(2) ==============HOX2a_HOX2a --------->TGA1a <------NtERF2 ------ <---------TGA1a --------->ATERF1(1) ------ <---------O2 <---------ANAC46 <------ --------->DEAR3(1) --------->SPL7 <---------ATERF1(1) <------ --------->ANAC46 ------->TEIL ------>NtERF2 --------->LBD16 -- <---------ALFIN1 <---------SPL7 --------->LBD16 ------- ------>ZAT6 <---------bZIP60(1) <---------DEAR3(1) -------- -------ALFIN1 --------->O2 --------->DEAR3(1) <---------ALFIN1 <---------LBD16 ------>NtERF2 ---- =======================MYC_MYB <---------ALFIN1 <---------At4g35610 -------- --->P <---------ALFIN1 --------------->AtSPL8 ------>ZmHOX2a(1)------>NtERF2 ------>ZmHOX2a(2) >At4g35610 ------>NtERF2 --------------->AtSPL3 ------>ZmHOX2a(1) <---------ATERF1(1) <------ZmHOX2a(2) -At4g35610 ----------->HVH21 <---------ALFIN1 <---------ZAT2 --------->At4g35610 <---------ARR11(3)
ccactcccacaccgcgacgtcgctctcgccgtacctctccctctcccacctccttcttcctcttcatccgctccggcgtcttcctccgcgatctcaacca	7446100
--- <-- === --- --- <-- <-- --- --- === --- === ------>NtERF2 --- --------->At4g35610 <-- --------->RRTF1(3) ------ --------->RAP2.3(2) <------ --------->RAP2.6(2) <------ --------->DEAR3(1) -------- --------->RAP2.3(1) -------- ------>NtERF2 -------- --------->LBD16 <------NtERF2 <------- <---------ATERF1(1) --------->LBD16 ======== --------->DEAR3(1) <---------LBD16 -------- --------->ANAC46 --------->ATERF1(1) <------- <---------LBD16 <------NtERF2 ======== --------ARR11(3) <---------ATERF1(1) -------- -->MYB83 ------>NtERF2 <------- ----------ARR10 <---------ARR14(2) -------- ->GAMYB <---------At4g35610 --------->At4g35610 ======== --->AtMYB61 --------->GLK1(2) -------- ---MYB55(2) --------->ZAT14 --------->ARR14(2) <------- ---MYB52(2) <---------ZAT14 --------->ATERF1(1) =========================== ------->ARR11(3) --------->ZAT2 <-----------------AGL1 <---------ARR14(2) -------- -->MYB46(3) <---------ZAT2 ------->TEIL <---------At4g35610 ---------->DOF2 ------>NtERF2 ->ANAC58 --------->STY1(2) <---------ARR14(2) --------->MYB52(1) --------->DEAR3(1) -->MYB46(1) <---------ARR14(2)--------->ZAT18 --------->ALFIN1 =========================== ->ANAC58 ---------->DOF2 <<<<<<<ZML2 --------->ARR14(2) <------ZmHOX2a(1) <---------ALFIN1
acatctccgccgctaaaagcttatccgagctagaacgagtgaaccgaatcggaagcggagccggaggaacggtttacaaagtaatccacactccgacgtc	7446200
<----------DOF2 ------>ZmHOX2a(1) ------>TGA1a -------TGA1a ==============================bZIP_DOF <---------ARR11(3) ------>ANAC58 --------->ARR11(3) ------>bZIP60(1) --------->AGP1 -------bZIP60(1) --------->ARR14(2) -------O2 <---------ARR14(2) ------>O2 <---------AGP1 ------>bZIP60(2) <---------CCA1(2) =============bZIP_DOF ----------->ARR10 ------>ANAC58 --------->TGA2(2) =======================bZIP_DOF <-----------HVH21 ------>ANAC55(2) --------->ANAC58 -------ANAC55(2) --------->bZIP60(2) --->TGA2(2) <---------TGA1a -----HVH21 --------->bZIP60(1) -----TGA1 --------->O2 ->bZIP60(2) <---------O2 ->ANAC58 --------->TGA1a ->O2 <---------TGA2(1) --TGA1a --------->TGA2(1) =============bZIP_DOF <---------bZIP60(1) ->ANAC58 <---------ANAC58 <---------ZAT6 --O2 --------->ANAC55(2) --------->ANAC58 --------->ALFIN1 =======================bZIP_DOF <---------ARR11(3) ------>ZmHOX2a(2) ->bZIP60(1) <---------ANAC55(2)<-----------HVH21 --------->ARR14(3) --TGA2(1) --------->ANAC46 <---------ANAC58 <---------ARR14(3) ->TGA2(1) <---------LBD16 <---------ARR14(2) --------->ARR14(2) ==============================bZIP_DOF <---------ANAC46 --------->ARR11(3) ->TGA1a --------->MYB52(1)<---------At5g28300 --------->AGP1 --bZIP60(1) <----------DOF2 --------->ARR14(2) ------>ZmHOX2a(2)<------ZmHOX2a(2) =======bZIP_DOF =======================================bZIP_DOF <---------ARR14(2) ->ANAC46 ==============================================bZIP_DOF <------ZmHOX2a(2) ==bZIP_DOF ---------->DOF2 --------->ARR11(3)<------ZmHOX2a(2)<---------ARR11(3)
acgtcctttcgctctcaaagtgatttacggaaaccacgaagataccgtgagacgtcagatctgtagagagatcgagatcttaagaagtgttgatcatcca	7446300

AGI:	At3g21215.1
Description:	RNA-binding protein, putative. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G42240.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G42240.2); similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT2G42240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23190.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677)
Range:	from: 7441841	to: 7445309	Orientation: Reverse
Links:	TAIR MIPS

AGI:	At3g21220.1
Description:	ATMKK5 (MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5); kinase. Identical to Mitogen-activated protein kinase kinase 5 (MKK5) [Arabidopsis Thaliana] (GB:Q8RXG3;GB:O80398;GB:Q96517); similar to ATMKK4 (MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4), MAP kinase kinase/ kinase [Arabidopsis thaliana] (TAIR:AT1G51660.1); similar to double MYC-tagged mitogen activated protein kinase kinase 5 [synthetic construct] (GB:ABF55665.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains Inte
Range:	from: 7445763	to: 7447357	Orientation: Forward
Links:	TAIR MIPS

Please cite the corresponding publications when using AthaMap.