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Chromosome 1
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Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
REM1(1)
--------->
At4g35610
--------->
TOE2(3)
<---------
At4g35610
--------->
ARR14(2)
<---------
ZAT2
--------->
ICU4
<---------
ARR14(2)
--------->
At4g35610
<---------
ICU4
<---------
ARR11(1)
<---------
At4g35610
--------->
ICU4
<---------
AHL20(2)
--------->
ARR11(3)
<----------
DOF2
--------->
ALFIN1
<-----------
HVH21
--------->
AHL20(2)
--------->
GLK1(2)
----->
ID1
--------->
MYB52(1)
------>
ZmHOX2a(1)
<---------
AHL20(2)
------->
TEIL
<---------
ARR11(3)
ctcctttagattacgaacgggtgctgctacatctcctctctgtcattagtcattactaaatatttaaaccaagttcgaatctgtcttacattatcttatt
6273600
---------->
DOF2
-----
--------->
TOE2(3)
<----------
DOF2
---------->
DOF2
<---------
AHL20(2)
---------
<---------
ARR11(3)
<----------
DOF2
<---------
ZAT18
--------->
AHL20(2)
<-----------
GT1
--------->
ARR11(3)
<---------
ICU4
--------->
ZAT18
--------->
TOE2(3)
--------->
AHL20(2)
--------->
AHL20(2)
<-------
TEIL
---------->
DOF2
--------->
TOE1(3)
<-------
TEIL
-----
tcataaaatctcaaagccaaattcatcttttcttttgaaagtgctccctcaaaagctaaacctcaaacatataaaatagcaaattcattttaacaaaagc
6273700
--------->
MYB52(1)
--------->
AHL20(2)
--------->
WOX13(1)
--------->
ANAC55(1)
--------->
ANAC55(2)
--------->
ANAC46
----
--------->
ANAC58
------>
NtERF2
--------->
bZIP60(2)
--------->
DEAR3(1)
--------->
O2
<---------
ANAC55(2)
--------->
MYB46(3)
--------->
LBD16
--------->
GLK1(1)
--------->
ANAC55(2)
------>
ZmHOX2a(1)
--------->
DEAR3(1)
----
---->
TOE1(3)
--------->
ANAC58
--------->
ZAT14
--------->
LBD16
<-----------
HVH21
->
DOF2
--------->
ANAC58
<---------
At4g35610
--------->
HSFB2a(2)
<---------
LBD16
---->
TOE2(3)
--------->
ANAC58
--------->
At4g35610
<---------
HSFB2a(2)
<---------
ANAC46
ttaatgaattccacgtaagcaattacataacgtttttgcccctagtcagtagagtccctccttctaactccgagaaccagcgtccatgtctcgcggacca
6273800
<-------
GAMYB
--------->
TOE1(2)
--------->
TOE2(2)
----------->
RAV1(2)
--------->
ZAT2
<---------
ZAT2
-------->
P
<---------
ANAC58
=====================================
MYC_MYB
------>
MYB83
------>
MYB46(1)
<-------
PIF4
<---------
ANAC58
------->
PIF4
===========================
MYC_MYB
<-------
PIF5
===========================
MYC_MYB
<-------
MYC3
<---------
ANAC46
------->
MYC4
<------
MYB46(1)
<-------
MYC4
<---------
MYB46(3)
------->
PIF5
<---------
DEAR3(2)
------->
MYC3
<---------
MYB46(3)
<-------
MYC2
=========================================
--------->
REM1(2)
------->
MYC2
==============================
MYC_MYB
--------->
ALFIN1
=========================
MYC_MYB
------->
MYC2
--------->
O2
<--------
P
<-------
MYC2
<---------
ANAC58
<------
MYB83
<---------
ANAC46
------->
MYC4
--------->
TGA1a
<---------
AtMYB61
<------
NtERF2
------->
PIF5
<---------
TGA1a
--------->
MYB111(1)
--------->
ALFIN1
------->
MYC3
=====================
MYC_MYB
--------->
TGA1a
<-------
MYC4
=======================================
MYC_MYB
<-------
PIF5
<---------
bZIP60(2)
<---------
bZIP60(2)
<-------
PIF4
<---------
O2
===============================
MYC_MYB
<---------
TGA1a
================
MYC_MYB
<---------
O2
--------->
TGA1a
<---------
ANAC46
--------->
MYB55(2)
<---------
TGA1a
<
--------->
ANAC55(2)
<---------
ANAC58
--------->
MYB52(2)
--------->
O2
-
<------
MYB83
===========================================
MYC_MYB
<---------
ANAC46
<
<---------
TOE2(2)
<-------
MYC3
================
MYC_MYB
------->
GAMYB
-
<---------
TOE1(2)
------->
PIF4
<---------
ANAC55(2)
----------->
HVH21
-
--------->
MYB52(2)
--------->
O2
--------->
ANAC55(2)
========================
<-------
TEIL
<---------
O2
<-----------
HVH21
<-------
GAMYB
========================
<---------
ANAC58
===========================================
MYC_MYB
--------->
DEAR3(2)
-
<---------
ANAC58
======================================
MYC_MYB
--------->
MYB46(3)
<
-->
MYB83
<------
MYB46(1)
======================================
MYC_MYB
--------->
At4g35610
<--
-->
MYB46(1)
<------------
OsbHLH66
------------>
OsbHLH66
--------->
At4g35610
<--------
aatgcgttcgtaggtaagacgcttgcacgtgtcgagatgtaatcggtcacgtgccaacctgggttggttgcatcagcatccgacgtggcgatgtgaatgg
6273900
------->
MYC4
------->
MYC2
<-------
PIF5
------->
PIF5
--------->
ANAC58
<-------
MYC4
<---------
ARR14(2)
<-------
MYC2
--------->
ARR14(2)
------->
PIF4
------------>
CBF
------->
MYC3
--------->
MYB46(3)
<-------
PIF4
<---------
MYB55(2)
<-------
MYC3
--------->
ANAC58
=========
MYC_MYB
--------->
ANAC46
---------
ANAC55(2)
--------->
ANAC58
-------->
ANAC55(2)
------>
MYB83
--------->
ANAC58
---------
O2
------>
MYB46(1)
-------->
TGA1a
<---------
MYB111(2)
<---------
AHL20(2)
-------->
bZIP60(2)
<---------
MYB55(2)
--------->
AHL20(2)
=========
MYC_MYB
--------->
MYB46(3)
--------->
AHL20(2)
=========
MYC_MYB
--------->
DEAR3(1)
<---------
AHL20(2)
----
-------->
O2
--------->
ANAC58
--------->
YAB1
--------->
ZAT6
---------
TGA1a
--------->
ANAC46
--------->
HSFB2a(2)
--------->
YAB1
----------
OsbHLH66
--------->
ANAC58
<---------
HSFB2a(2)
----------->
GT1
<-
-
AtLEC2
--------->
TOE2(2)
<---------
ALFIN1
<----------
DOF2
----------->
TBP
------>
ZmHOX2a(2)
ccacgtgctacaaaacctatgtatagaaacacccacccaatccccaagcacttttattcattttctataaaaaaatttacaaggatcgtataatactact
6274000
--------->
LBD16
<---------
HSFB2a(2)
--------->
HSFB2a(2)
--------->
AHL20(1)
<---------
ARR11(3)
--------->
ANAC58
--------->
ARR11(3)
----------->
GT1
--------->
ANAC58
<---------
AHL20(1)
----------->
GT1
---------->
DOF2
<---------
AHL20(2)
<----------
ID1
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
ANAC58
*
TSS
<---------
AHL20(2)
--------->
TOE2(3)
--------->
DAG2
---------->
DOF2
--------->
YAB1
----->
MYB52(1)
<-----------
GT1
--------->
YAB1
------------------------>
ANAC81
--------->
ANAC58
-----------
MYB.PH3(1)
<---------
ICU4
---------->
DOF2
---------->
DOF2
---------->
DOF2
aacagttttttttaaatattttccagataaacattaataaaacgataaaaggcaaaaaataaaaaagaaaagaaagcaaaagcaaaatcaaaatcgatat
6274100
--------->
ANAC46
--------->
ANAC58
----------->
RAV1(1)
--------->
AtMYB61
<----------
DOF2
<---------
ALFIN1
<------------------------
ANAC81
--------->
ANAC46
<----------
DOF2
--------->
ANAC46
--------->
ANAC58
---------->
ID1
--------->
WRKY38(1)
--------->
ANAC46
<-----------
GT1
--------->
WRKY12
--------->
ANAC58
<-----------
GT1
<---------
MYB52(1)
----------->
RAV1(1)
--------->
KAN4(2)
<---------
WRKY38(1)
<----------
DOF2
<-------
GAMYB
--------->
ANAC58
----------->
RAV1(1)
-
atcagacaacgcctcgacctttctttctttttttccttctcatcgtctccgttgaacaacaccacacaaacaccagaagaacaccagataattcccatgg
6274200
--------->
ARR14(2)
<---------
ARR14(2)
----------->
ARR10
--------->
ANAC58
<---------
ZAT2
<---------
GLK1(1)
--------->
ZAT2
---------->
DOF2
--------->
GLK1(1)
<---------
At4g35610
--------->
YAB1
<---------
ZAT14
<----------
DOF2
--------->
MYB52(1)
--------->
At4g35610
<---------
ATHB12
<---------
MYB46(3)
<---------
SPL7
------
------>
TEIL
<---------
ANAC46
<------
ZmHOX2a(1)
<---------
TOE2(3)
--------->
ANAC58
<
tgaaccgagctcagatttgaaaattgaaggtcgtagacgaatcataaggaaagagagaagtggtttgagatttcttttttgacggacgaaaacggagata
6274300
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
<---------
ZAT2
<---------
ZAT14
--------->
ZAT14
--------->
ZAT2
<------
NtERF2
--------->
LBD16
<---------
DEAR3(1)
--------->
ALFIN1
<---------
ANAC46
<---------
At4g35610
<---------
LBD16
--------->
ATERF1(1)
--------->
At4g35610
<---------
ABI4(1)
<------
NtERF2
<---------
RAP2.6(1)
<---------
DEAR4(2)
--------->
ARR14(2)
<---------
RRTF1(1)
----------------->
AGL1
<---------
ERF1
--------->
DOF5.7(2)
<---------
RAP2.3(1)
<---------
MYB52(1)
------>
NtERF2
<---------
RAP2.6(2)
<-------
GAMYB
<---------
ORA47(2)
--------->
DEAR3(1)
<---------
ATERF1(1)
<---------
DEAR3(1)
<---------
RAP2.3(3)
--------->
RAP2.3(1)
<---------
DEAR3(1)
--------->
ATERF1(1)
--------->
ATERF1(2)
<------
NtERF2
<---------
ARR11(3)
<---------
ATERF1(2)
------>
NtERF2
--------->
ARR11(3)
<---------
RAP2.6(2)
<---------
RAP2.3(1)
--------->
ALFIN1
<---------
ATERF1(1)
<---------
RRTF1(2)
<---------
RAP2.3(3)
<---------
RRTF1(3)
<---------
DEAR3(1)
<---------
DREB2C(2)
--------->
LBD16
<---------
ARR14(2)
<---------
GLK1(2)
<---------
RAP2.3(2)
<---------
ARR14(2)
<---------
LBD16
<------
NtERF2
--------->
ATERF1(1)
------->
GAMYB
--------->
ALFIN1
------>
NtERF2
<------
NtERF2
--------->
ATERF1(1)
--------->
MYB46(3)
<-------
--->
CCA1(2)
<---------
RAP2.3(2)
<---------
DEAR3(1)
--------->
ALFIN1
<---------
ALFIN1
<---------
ZAT14
----------
DOF2
<---------
ERF1
<---------
ARR14(2)
<---------
ABI4(1)
<------
NtERF2
--------->
ARR14(2)
agctttgggggaa
atggcgacgccgttaccagattttgagacggcgagaggcggcggagcagtggcgtcttcttcaaccacggttcttccgagttctgtg
6274400
<---------
ANAC46
<---------
ANAC58
<---------
ANAC58
--------->
ALFIN1
<-----------
RAV1(1)
<---------
ANAC46
--------->
LBD16
----------->
RAV1(2)
<---------
LBD16
<---------
ANAC58
<---------
bZIP60(2)
<---------
ANAC58
<---------
ANAC46
--------->
WRKY38(1)
----------->
HVH21
<---------
GLK1(2)
<---------
MYB52(1)
----------->
TGA1
<---------
YAB1
<---------
At4g35610
--------->
At4g35610
------>
ZmHOX2a(1)
----
--------->
At4g35610
<---------
HSFB2a(2)
<------
ZmHOX2a(2)
-----
<-------
GAMYB
--------->
ARR14(2)
--------->
ANAC58
<---------
ARR14(2)
--------
<<<<<<<<<
TBF1
<---------
MYB46(3)
--------->
HSFB2a(2)
<---------
GLK1(1)
<---------
ANAC58
<<<<<<<<<
TBF1
--------->
SPL7
<---------
ARR14(2)
--------->
ANAC58
--------->
ARR14(2)
<----------
DOF2
--
ANAC46
<<<<<<<<<
TBF1
--------->
MYB52(2)
<---------
LBD16
--------->
GLK1(1)
<---------
ANAC58
tcttcttcttcttcttcatctcgtccgttgcctgtggcgaattcgttctcggatgacgcggaagagatttctccgatcctgattttcttgttctttcata
6274500
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AGI:
At3g18290.1
Description:
EMB2454 (EMBRYO DEFECTIVE 2454); protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G74770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68085.1); similar to putative E3 ubiquitin ligase [Lotus japonicus] (GB:BAF38781.1); contains InterPro domain Zinc finger, CHY-type; (InterPro:IPR008913); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Hemerythrin/HHE cation-binding motif (InterPro:IPR012312); contains InterPro domain Zinc finger, RING-typ
Range:
from: 6274001
to: 6280516
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.