Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <------MYB83    <------MYB46(1)   <---------MYB46(3)   <---------AtMYB61  <---------MYB52(1)  <---------MYB55(1)  <--------P <-------GAMYB <---------MYB52(1) ---------MYB46(3) ---------DEAR3(2) --------DEAR3(1) ------>ATERF1(1) ----NtERF2 ------ATERF1(1) -->NtERF2 -------->AtMYB77 ----->ABI4(1) ---->RRTF1(3) ---->RRTF1(2) ---->DEAR3(1) -----DEAR3(1) -----ATERF1(2) ---->ATERF1(2) ---->RAP2.3(3) ---->RAP2.3(2) --->DEAR4(2) -NtERF2 --->RAP2.3(1) --->ORA47(2) --->ERF1 --->RRTF1(1) --->ATERF1(1) --->RAP2.6(1) ---RAP2.3(1) -->ABI4(1) ---DREB2C(1)                                                                  ------>ZmHOX2a(1) ---DEAR4(2)                                                                 --------->HSFC1(2) ---ATERF1(1)                                                                ======================== -->At4g35610                                                                --------->HSFB2a(1) ---At4g35610                                                                <---------HSFC1(2) --ALFIN1                                                                    <---------HSFB2a(1) ->ANAC46                                                                    ------>ZmHOX2a(2) ->ATERF1(2)                                                                <------ZmHOX2a(2) ->RAP2.3(3)                                                                ========================= ->RAP2.3(2)                          <---------ANAC58                     <---------GLK1(2) ->RAP2.6(2)                          <---------ANAC46                     <---------ARR11(3) --ATERF1(2)                          ----------------->AGL1           <---------LBD16 --DEAR3(1)                           <---------ANAC58            --------->ANAC58 ->DEAR3(1)                      <---------At4g35610              --------->ANAC46 ->RRTF1(2)                  <---------ALFIN1                     --------->ANAC58 ->RRTF1(3)                  --------->AtMYB61         ------>NtERF2 ------->TEIL >RRTF1(1)                --------->ANAC46             ----------->RAV1(1) --------->ARR14(2) >ATERF1(1)        <---------MYB52(1) <-----------------AGL1   --------->DEAR3(1) >DEAR4(2)        <-------GAMYB  --------->At4g35610  --------->DEAR3(1)   <---------ARR14(2) >ERF1         --------->ZAT14  --------->DEAR3(1)   --------->At4g35610 --------->LBD16         ---- >RAP2.6(1)    <---------ZAT14 --------->MYB46(3) --------->At4g35610<---------ARR14(2)         ----- >ORA47(2)     <---------At4g35610  ------>NtERF2 <---------ZAT2--------->MYB52(1)  ----------->HVH21 >RAP2.3(1)<---------ALFIN1 --------->MYB46(3)    <---------At4g35610--------->ARR14(2)        <-----   gccggttggtctcccactgctgttattccctccaccgctggcctgaatcggaagcagcgccagagccaacgcatccggatccttctgcgacgaattaccc  4708500                                                                <------NtERF2                                                               <---------MYB46(3)                                                               --------->LBD16                                                              <---------DEAR3(1)                                                              --------->ALFIN1                                                              <---------ANAC46                                                             --------->ATERF1(1)                                                             <------NtERF2                                                             <---------LBD16                                                            <---------ATERF1(1)                                                            ------>NtERF2                                                            <---------RAP2.3(1)                                                            <---------DEAR4(2)                                                            <---------ERF1                                                           --------->DEAR3(1)                                                          --------->ERF1                                                          --------->DEAR4(2)                                  --------->MYB46(3)      --------->RAP2.3(1)                                  <---------ABI4(2)       --------->ATERF1(1)                                --------->ANAC58         ------>NtERF2                                --------->ANAC46         --------->LBD16                                --------->ANAC58      --------->SPL7                       --------->ARR14(2)                           ------>MYB83             <-----------HVH21            <---------At4g35610                        <---------At4g35610   <---------MYB52(1)--------->ALFIN1 ----------->GT1                        --------->At4g35610 ------->GAMYB<---------ATERF1(1)     --------->At4g35610   <-----------HVH21    --------->ZAT2   <---------ARR14(2)<---------DEAR3(1)--------->ARR14(2) <------ZmHOX2a(1)     <---------ARR14(2)--------->ARR14(2)<---------ATERF1(2) <-----------RAV1(2) =======HOX2a_HOX2a    --------->ARR14(2)--------->MYB52(1)--------->ATERF1(2)<------ZmHOX2a(2) =======HOX2a_HOX2a    ------->TEIL    --------->At5g28300<------NtERF2      <---------ARR14(2) ----->LBD16          <------NtERF2  <------NtERF2 <---------ANAC58  <------ZmHOX2a(1)     <---------ARR14(2) ---->ANAC46          ------>NtERF2 ------>NtERF2  <---------ANAC58  ================HOX2a_HOX2a ----LBD16   --------->YAB1------>MYB46(1) <------------AtMYB77------>NtERF2 <-----------HVH21  -----   ggaggagtcagagaataagaaggcggacctgccgaagccaccgtaaccgtgattcgtcccgccggcggggaggaagacggatcaggtgaatcggaaccct  4708600                                                     <---------At4g35610                                             ------>ZmHOX2a(2)                                            <---------At4g35610                                            --------->At4g35610                                            <------ZmHOX2a(2)                                           <---------AGP1                                           <---------ARR14(2)                                           --------->GLK1(2)                                           <---------ARR11(3)                                           <-----------ARR10                                           --------->ARR14(2)                            ----------->GT1                                          <---------ARR14(1)                         --------->ALFIN1                                          <---------CCA1(2)                       <---------TOE2(3)  ------>ZmHOX2a(2) ===============================HOX2a_HOX2a               <---------ZAT6  =========================HOX2a_HOX2a   --------->LBD16                  --------->CCA1(2) ==========================HOX2a_HOX2a  <---------TOE1(2)                <---------ARR14(2)      ---- <------ZmHOX2a(2)  ------>ZmHOX2a(1)  <---------LBD16<---------GLK1(2)  --------->ARR14(2)   <------ ---->LBD16         ================================HOX2a_HOX2a---------->DOF2    <---------TOE1(3)   gagatcggatgtcttcatcgtcctccatggaattcgatatcgccggatctgagtcagaagctcgtgaaagagggagatagggttagggtttgggttaata  4708700                                                                                               <-----                                                                                               ======                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                              <---------TGA1a        <---------O2                                                              <---------ANAC46       --------->O2                                                              --------->TGA1a        <---------ANAC58                                                              <---------ANAC58       <---------ANAC46                                                              <---------ANAC58       <---------bZIP60(2)                                                              <---------O2           ================                                                      --------->ALFIN1               ================                                   <---------MYB46(3)------->MYC3                    <---------TGA1a                                   <---------DEAR3(2)------->PIF5                   ----------->STF1                                  <---------At1g77200<-------MYC2                  <---------TGA2(2)                                  <---------DEAR3(1) <-------PIF5                 ----------->HVH21                                <-----------HVH21    ------->MYC2               --------->At4g35610                                ------>NtERF2        ------->MYC4               ----------->bZIP910(2)                               --------->DEAR3(1)    <-------MYC3          <---------LBD16     <-----                               <---------DEAR3(1)    <-------MYC4         <---------ANAC46     ------                               <---------ANAC46     ====================bZIP_bZIP ----------->TGA1---                              --------->ATERF1(1)   --------->O2         <-------TEIL<---------ANAC58                             <---------ATERF1(1)    <---------TGA1a     --------->ARR14(1)     ------               --------->MYB52(1)<------NtERF2      <---------ANAC46   --------->ARR14(2)      ------              <---------WRKY38(1)--------->ATERF1(1)<---------ANAC55(2)<---------ARR14(2)      <-----          ----------->GT1    <---------RAP2.3(1)    --------->TGA1a    --------->ARR11(1)      ======     <---------HSFB2a(2)    <---------DEAR3(1)      <---------O2       --------->ARR11(3)      <-----     --------->HSFB2a(2)   --------->ATERF1(1)     ------------>OsbHLH66--------->CCA1(2)     -------    <---------LBD16       <---------ATERF1(1)    ---------------->PIF3(2)<---------LBD16    --------- ----->GLK1(2)<---------WRKY12<------NtERF2    ----------->HVH21     ----------->ARR10      --------- ---YAB1--------->ALFIN1<------ZmHOX2a(1)   <---------ANAC46<------ZmHOX2a(1)   <---------At4g35610 <   ttctgttcgggaggggtaaacgggaaggagacggcgtcggtgagtagaggggacacgtggaaggacgtgagaagatacggggagatgacgtggaatgacg  4708800      <------MYB46(1)      <------MYB83     --------->MYB111(1)     --------->MYB59     --------->MYB46(2)    <--------P  <------MYB46(1)                          <------NtERF2  <------MYB83                             --------->ATERF1(1) ----bZIP60(2)                             <---------ZAT2 ============MYC_MYB                       --------->ZAT2 ----ANAC58                               <---------DEAR3(2) --->ANAC55(2)                           <---------RAP2.6(2) ----ANAC55(2)                           <---------RAP2.3(3) ----ANAC46                              <---------ATERF1(2) ----bZIP60(1)                           <---------DEAR3(1) ----ANAC55(1)                   ---------->DOF2 ============MYC_MYB          --------->LBD16 ====bZIP_bZIP          <-----------TGA1 <---------RAP2.3(2) ----O2                --------->ANAC46 <---------ANAC58 --->O2<-----------HVH21<-----------HVH21--------->ATERF1(2) ------>ATHB12         --------->ANAC55(2)------>NtERF2 --->TGA1a             <---------ANAC55(2)<---------RAP2.6(3) --->bZIP60(1)         <---------ANAC58 --------->RAP2.6(3) ----TGA1a             <---------ANAC58 --------->ATERF1(1) ===========================================bZIP_DOF ----ANAC58           ----------------->AGL1 ---->STF1          --------->GLK1(2)   <---------ANAC58--------->At5g28300             <---------CCA1(2) -->TGA1         ----------->ARR10--------->DAG2 <----------DOF2                 <-----------GT1 -->HVH21<---------WRKY12----------->HVH21<---------ATERF1(1)              --------->YAB1 ---------WOX13(1) <---------GLK1(2)    <---------LBD16*TSS---------->DOF2 ----------->GT1   tgattggtaggtcagaggtaagattccgtcaccggtaaagttgccggctcggtttaggggtaaaagatgggtttgtatcgtaatttccccatttcttcgt  4708900                                                         <---------HSFB2a(1)                                                     --------->LBD16                                                    --------->HSFB2a(2)                                                    <---------HSFB2a(2)                                                   <---------LBD16                                                  --------->MYB52(1)                      <---------MYB59                                                 <-----------GT1                        ------->TEIL                                                 <<<<<<<<<GT-2                        <---------SPL7                                              <---------ICU4                         <---------REM1(1)                                              <--------HAHB4                        <---------------AtSPL3                   <---------LBD16            --------->YAB1      ----------->HVH21 <---------------AtSPL8               <------------CBF              <---------YAB1      --------->LBD16--------->LBD16        <------ZmHOX2a(1)--------->DAG2      ----------->TBP   <---------LBD16<---------LBD16       -  --------->At4g35610   ---------->DOF2 <-----------GT1  --------->HSFB2a(1)<-----------GT1     <----   aatccgatgaggaagtgtattgacggaaaagcccatctagttttactataattaccggaactatccccgtgaaccatttttccggtgatgtaccgaaatt  4709000               --------->MYB52(2)             <---------MYB52(1)            <-----------HVH21            <-----------TGA1           ------->GAMYB          <------------AtMYB77                                                              ---------          --------->MYB46(3)                                                         <---------ANAC58        --------->MYB52(1)                                                           <---------ANAC58      <---------MYB59                                  --------->MYB52(2)        <---------ANAC58 <---------MYB52(1)                  <----------DOF2 <---------MYB52(1)          <---------ANAC58 -------->TOE1(3)             <---------MYB46(3)   <---------ETT(2)          <---------MYB52(1) ----- -------GT1--------->ANAC46 <-----------HVH21      --------->ETT(2)        --------->MYB52(2)--------   acccttagcctaaccgtcagtttcaatatcggtcgtagactttttttagtccgtcgatagtttccagttgtcttccttcgttgtcttgcttcattcgtta  4709100                                          --------->ALFIN1                                        <---------ANAC58                                        --------->TGA1a                                        <---------O2                                        ===========================bZIP_DOF                                        ===========================bZIP_DOF                                        <---------ANAC55(1)                                        <---------TGA1a                                        <---------bZIP60(2)                                        <---------ANAC58                                        --------->O2                                     ----------->TGA1                                          ------                                     ----------->HVH21                                        -------                                --------->MYB52(1)                                      --------->ANAC58                             --------->YAB1          <---------AHL20(2)                 --------->ANAC58                          --------->YAB1<---------ANAC46                        <----------DOF2<-----                         --------->ZAT6----------->STF1                         --------->GLK1(1) -->GT1                <-----------GT1<---------TGA2(2) <----------DOF2 --------->ATHB12--------->ANAC46 ----->DOF2        ===============================bZIP_DOF             <---------YAB1  --------->SPL7 ->TOE2(3)         <----------DOF2  <-----------HVH21<-----------GT1   <---------AHL20(2)     -------   aatcgattcgaattagtctctcttttaacaataagaacggtgacgtggatgttatttactttgggcatgggtttttattgggctttccatacgctacgtt  4709200                                                               --------->LBD16                                                              <---------HSFB2a(2)                                                   --------->TOE2(3)                                                   --------->TOE1(3)                                     <-----------HVH21   <---------ICU4 --->DOF5.7(2)                  <---------YAB1     <----------DOF2                   <---------ARR11(3) -->TOE2(3)               <----------DOF2     <-------TEIL    <---------HSFC1(1)     --------->ARR11(3) ----MYB52(1)          <-----------GT1  ---------->DOF2<-----------GT1   <---------YAB1      <------- -->TOE1(3)     <---------YAB1<-----------GT1--------->CCA1(2)--------->HSFB2a(2)---------->DOF2    <   agcatgttatcacttagtatcattttttcttttcaccattgtcaaagatacaactttaaacattccagaaatactatgtttcaaaaagaccttatataat  4709300                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(2)                                                                                      --------->AHL20(2)                                                                                     --------->AHL20(1)                          <---------AHL20(2)          --------->DAG2      --------->ZAT14                         XXXXXXXXXXXXXXXXXXXX>MIR870 ---------->DOF2      --------->ZAT18                         <---------AHL20(2)        --------->AtMYB61      <---------ZAT14                         --------->AHL20(1)     <----------ID1        <---------------AtSPL8        -       ----------->GT1   --------->AHL20(2)   XXXXXXXXXXXXXXXXXXXX>MIR161.2  --------->ANAC46  ------ --AHL20(2)   <---------MYB52(2)         --------->TOE2(3)        <---------YAB1     <---------AHL20(1) ---------ANAC46--------->MYB52(1)    <---------CCA1(2)        <---------MYB52(1)   --------->AHL20(2)   cttcgtgaattgtgaaacaaacagaaatttaatatttctcaaatctcaaaacaccaaaagcgaccattatgttatgtacacagcaaatatatatatacaa  4709400  Previous    Next  AGI:  At3g14180.1    Description:  transcription factor. similar to transcription factor [Arabidopsis thaliana] (TAIR:AT1G54060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45576.1) Range:  from: 4707120    to: 4708855    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g14185.1    Description:  other RNA Range:  from: 4709279    to: 4709821    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.