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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC58
--------->
ANAC58
------>
ZmHOX2a(1)
--------->
TOE2(3)
<---------
ALFIN1
<---------
REM1(2)
<---------
ARR14(2)
------->
ZAT2
--------->
ARR14(2)
<<<<<
------->
At4g35610
--------->
ANAC46
--------->
ANAC46
--------->
TOE1(3)
<---------
tagcagaccatttcttcacaggcttcgactcaactcttaaactcttggctctacgaagcgcatccacttccttaagcaaatcaaattcgatacctttctt
4094600
----
-----
------
--------->
ZAT2
<--------
--------->
At4g35610
<--------
--------->
MYB46(3)
<---------
ANAC58
----------->
RAV1(1)
<---------
ANAC58
--------->
MYB52(1)
<-----------
GT1
--------->
ANAC58
<---------------
AtSPL3
--------->
ANAC58
<---------
ARR14(2)
--------->
ANAC55(1)
<---------
GLK1(2)
--------->
ANAC46
--------->
ARR14(2)
--------->
ANAC55(2)
--------->
ARR14(2)
<----------
<<<<
TBF1
<---------
ANAC55(2)
<----------
DOF2
--------->
MYB46(3)
<---------
ARR14(2)
-----------
-
DOF2
<---------
ALFIN1
<---------
GLK1(2)
<---------
MYB111(2)
--------->
ANAC46
-------
cttcaactcttcaacacatttacgcaacagcttcgcatcttctttctccctctccaacaacttctcaagatgcgattccacttcagatttgtaccgtacc
4094700
--------->
ANAC46
--------->
ANAC58
<----------
DOF2
<---------
ATHB12
==================================
HOX2a_HOX2a
-->
NtERF2
--------->
ARR11(3)
--
---->
DEAR3(1)
<------
ZmHOX2a(2)
<------
ZmHOX2a(1)
--->
DEAR3(2)
--------->
At4g35610
--------->
ARR14(2)
<---------
TOE2(3)
-
SPL7
<---------
At4g35610
<---------
ARR14(2)
--------->
At4g35610
-
SPL1(2)
--------->
ANAC58
<---------
ZAT14
------>
ZmHOX2a(2)
<---------
At4g35610
-----
AtSPL3
--------->
ANAC58
--------->
ZAT18
<---------
ARR11(3)
<------
ZmHOX2a(1)
<---
---->
AtSPL3
--------->
ANAC46
<---------
ZAT14
<-------
TEIL
--------->
ANAC58
--------->
At4g35610
<---
-->
SPL7
------>
ZmHOX2a(2)
--------->
ZAT14
------>
ZmHOX2a(2)
--------->
At4g35610
<---
gcccaaatgatccccaaggaagatagcagagcgcagagtgaagggatccatgatcttttacaagcactggaagaagcagaggaagatgaggatgaagaag
4094800
<---------
WOX13(1)
<---------
ZAT2
<---------
--------->
At4g35610
--------->
At4g35610
--------->
GLK1(2)
<---------
REM1(1)
---------->
DOF2
--------->
ZAT2
<---------
GLK1(2)
------->
ALFIN1
--------->
ALFIN1
<---------
At4g35610
------>
ZmHOX2a(2)
------
ANAC46
<---------
ANAC46
<---------
AGP1
<---------
AGP1
------
ANAC58
<---------
ANAC58
<---------
REM1(1)
--------->
GLK1(2)
------
ANAC58
<---------
ANAC58
--------->
ARR11(3)
<---------
GLK1(2)
-
cgtggaagagaagtagcagagaaatggagtggaagagaaagaagaagatgtagagctgagtgatttctcttcgaacagaatcgatctgagattctttgtg
4094900
--------->
ARR14(2)
------->
TEIL
<------
MYB46(1)
<-------
GAMYB
<-----------
RAV1(1)
<---------
ANAC46
<---------
ANAC58
<---------
ANAC58
<---------
ANAC58
==================
HOX2a_HOX2a
<---------
HSFC1(2)
------>
ZmHOX2a(2)
--------->
HSFC1(2)
===================
HOX2a_HOX2a
=====================================
HOX2a_HOX2a
====================================
HOX2a_HOX2a
<------
ZmHOX2a(1)
<---------
CCA1(2)
--------->
LBD16
<---------
AtMYB61
<---------
LBD16
--------->
ALFIN1
<------
ZmHOX2a(2)
<---
--------->
ANAC58
===========================
RAV
--------->
ARR14(2)
<---------
ANAC58
--------->
ANAC58
--------->
MYB46(3)
<---------
ANAC58
--------->
TOE1(2)
<------
ZmHOX2a(1)
-
DOF2
<---------
ANAC46
<-----------
GT1
--------->
GLK1(2)
<---------
ARR14(2)
===============
-------->
CCA1(2)
<----------
DOF2
<-----------
RAV1(2)
<------
MYB83
<---------
ARR14(2)
<---------
ANAC58
agagacacggcttagaattagctcttcttcttttaaccattgtttcaggagaagcttgtgtgttggtgtatctgcgatctggtgaagaggatgtcttgtc
4095000
<----------
DOF2
--------->
ANAC46
--------->
ANAC58
<---------
ZAT14
<---------
HSFC1(2)
--------->
ZAT14
--------->
HSFC1(2)
--------->
ZAT18
<---------
HSFB2a(1)
<---------
ANAC58
--------->
AtLEC2
<---------
ANAC58
------>
NtERF2
<-------
TEIL
<---------
TGA2(1)
<---------
ARR14(2)
--------->
bZIP60(1)
------>
ZmHOX2a(2)
----------->
HVH21
<---------
DEAR3(1)
------>
ZmHOX2a(2)
----------->
GT1
--------->
ATHB12
<---------
At4g35610
<-------
GAMYB
<---------
ARR14(2)
------>
NtERF2
--------->
ARR14(2)
<---------
bZIP60(1)
----------->
ARR10
-------
DOF2
<---------
MYB46(3)
--------->
ANAC58
<---------
MYB46(3)
--------->
ALFIN1
--
=================
HOX2a_HOX2a
--------->
At4g35610
<---------
TOE2(3)
<---------
ZAT14
--------
tttgcctccatgatcggtggattcgtgctctgatctgacgccat
ggaagctttgtggttagagagagagagagaagtgtagatttgtgaatcgcagagaa
4095100
------->
TEIL
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
<----------
DOF2
--------->
AHL20(1)
--------->
LBD16
<----------
DOF2
<---------
AHL20(2)
<-------
TEIL
<---------
TOE2(3)
<----------
DOF2
--------->
AHL20(1)
------>
ZmHOX2a(1)
<---------
LBD16
<------------
MYB.PH3(1)
<---------
AHL20(1)
--------->
ARR14(2)
<---
--------->
ARR11(1)
--------->
MYB52(1)
--------->
AHL20(2)
<---------
GLK1(2)
-----
-------->
DOF2
<------------
CBF
<---------
DOF5.7(2)
--------->
AHL20(2)
<---------
ARR14(2)
<-----
--->
GT1
------>
NtERF2
<----------
DOF2
<---------
AHL20(2)
<-----------
GT1
--------
aaaaagatgcggactttattgaggctctttggtaacggctcttttgggttttattttaaaatattatatgaatttacagatttgtcctgagagcgtaacg
4095200
<---------
ALFIN1
----------->
HVH21
<------
NtERF2
<-----------
HVH21
------>
NtERF2
--------->
bZIP60(2)
<---------
bZIP60(1)
--------->
bZIP60(1)
--------->
O2
<---------
ATERF1(2)
--------->
RRTF1(3)
--------->
RRTF1(2)
--------->
RAP2.3(3)
--------->
ATERF1(2)
--------->
RAP2.3(2)
--------->
RAP2.3(1)
<------
NtERF2
--------->
ATERF1(1)
--------->
RRTF1(1)
--------->
ERF1
<---------
RAP2.3(1)
<---------
ATERF1(1)
--------->
ANAC46
--------->
DEAR3(1)
------------>
CBF
<---------
RRTF1(1)
--------->
At5g28300
--------->
YAB1
------>
NtERF2
--------->
ANAC58
--------->
AHL20(2)
<---------
ATHB12
<---------
DEAR3(1)
--------->
ANAC46
<---------
ARR11(1)
--------->
WOX13(1)
<---------
ANAC58
<---------
At4g35610
--------->
ARR11(3)
------------>
CBF
<---------
ANAC58
--------->
YAB1
--------->
ANAC58
--------->
ARR14(2)
---
--------
HVH21
<-----------
GT1
<---------
DEAR3(1)
--------->
At4g35610
<---------
ARR11(3)
----
-->
GAMYB
<---------
ARR14(2)
--------->
DEAR4(2)
--------->
MYB52(1)
<-----------
ARR10
------
-------
MYB.PH3(1)
<---------
DEAR3(1)
<-------
TEIL
<---------
ALFIN1
<---------
ARR14(2)
--------
->
MYB52(1)
--------->
ARR14(2)
--------->
ORA47(2)
--------->
PCF2
<---------
CCA1(2)
--------
gtcatcaatcaacaatatacggctcggcttggcgccgtcacacattcgtaaactgccccacggtattttaggcccatatctggcccattaaaaacaagaa
4095300
<---------
DOF5.7(2)
<---------
MYB52(1)
--------->
TOE1(3)
--------->
DOF5.7(2)
--------->
TOE2(3)
--------->
TOE2(3)
<---------
DAG2
--------->
TOE1(3)
<-----------
GT1
----------->
GT1
--------->
ANAC58
<-----------
GT1
-------->
GT1
--------->
HSFB2a(2)
--------->
ANAC55(2)
--------->
AHL20(2)
----->
DAG2
<---------
HSFB2a(2)
<---------
ANAC55(2)
--------->
AHL20(2)
-----
---->
DOF2
<----------
DOF2
--------->
ANAC58
--------->
ANAC55(2)
<---------
TOE2(3)
->
ANAC58
<---------
DAG2
--------->
ANAC46
<---------
ANAC55(2)
<---------
TOE1(3)
->
ANAC58
<-----------
GT1
<------
ZmHOX2a(1)
<---------
YAB1
<---------
AHL20(2)
<------
aggtaattaaccttatcacctttgggaagaaaatagtgaggaagaccactcacgttatatttgtgcttaagtaattaacttatcgttaatgttgaaacta
4095400
--------->
ANAC55(2)
--------->
ANAC46
<-------
TEIL
--------->
bZIP60(2)
--------->
HSFB2a(1)
<-------
MYC3
--------->
ANAC58
------->
MYC3
--------->
HSFB2a(2)
----------->
GT1
<---------
ALFIN1
--------->
MYB46(3)
<-------
TEIL
--------->
ANAC58
---->
MYB52(1)
<-------
TEIL
<-----------
TBP
------->
TEIL
<---------
ANAC55(2)
---
MYB52(2)
<-----------
HVH21
-------->
P
<---------
HSFB2a(2)
--------->
SPL7
acgcttgaaccacatgtcaccaatatacatactgcaaccagtggatttatagaaaaatacattttctatttccgaacgttacaaattcgtaactcttctt
4095500
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AGI:
At3g12870.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47924.1)
Range:
from: 4094424
to: 4095044
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.