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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
----------->
TGA1
----------->
HVH21
<---------
MYB52(1)
--------->
ANAC46
--------->
O2
--------->
ANAC55(2)
=====================================
bZIP_DOF
<---------
O2
--------->
CCA1(2)
--------->
At4g35610
<---------
ARR14(2)
<---------
ATERF1(1)
<---------
TOE1(3)
--------->
RAP2.6(2)
<---------
TOE2(3)
<---------
At4g35610
<---------
bZIP60(2)
--------->
At4g35610
<---------
ANAC46
<---------
At4g35610
--------->
LBD16
--------->
At4g35610
<-----------
HVH21
--------->
AHL20(2)
--
---------->
DOF2
<---------
TGA1a
--------->
ICU4
--
===============================
bZIP_DOF
<---------
ATHB12
--------->
ARR14(2)
<----
<---------
MYB52(1)
--------->
TGA1a
<---------
YAB1
<---------
ARR14(2)
-----
-------
GAMYB
------>
NtERF2
<---------
ANAC46
---------->
DOF2
--------->
LBD16
<----
---->
ANAC46
<---------
ALFIN1
<------
ZmHOX2a(1)
<---------
LBD16
<----
---
DOF5.7(2)
--------->
MYB46(3)
--------->
ARR14(2)
<-----------
GT1
--------->
MYB46(3)
--
gccgttaagcagccgcttcccccacccgtgacgttgaggatatgatcaaatcaaagaattcaatataaaccggatttattaaaccacggttcaattagtc
3718000
----
<----
--------->
MYB52(2)
<----------
DOF2
<-----
<-------
TEIL
<---------
ZAT18
------>
ZmHOX2a(2)
<---------
MYB46(3)
--------->
MYB46(3)
--------->
CCA1(2)
<------
MYB46(1)
<---------
At4g35610
<------
ZmHOX2a(2)
------->
ANAC58
<------
MYB83
--------->
ANAC58
<---------
ARR11(3)
------->
ANAC58
--------->
MYB59
--------->
ANAC58
--------->
AGP1
------
-----
ZAT18
<---------
AtMYB61
--------->
SPL7
<---------
AGP1
<-----
---->
ZAT18
<---------
LBD16
<-----------
HVH21
--------->
ARR11(3)
-----
WRKY38(1)
<---------
MYB52(1)
<---------
MYB52(1)
<---------
ARR14(2)
-----
WRKY45
--------->
ANAC46
<-----------
TGA1
---------->
DOF2
--------->
ARR14(2)
<--
------->
ANAC46
<---------
DEAR3(2)
--------->
ANAC46
--------->
TOE2(3)
----------->
ARR10
------
cacgcattggtttaacgccggtttggttcgttctatccgtcagccactgggctctatcgttagagaaagagagagagggacagatctgtgaagttgggat
3718100
--
--
-----
<----
<-----
<-----
<----------
DOF2
<---------
ALFIN1
-------
<-----------
GT1
<---------
ANAC58
--------->
ANAC46
-------
<----------
DOF2
<---------
ANAC58
--------->
ANAC58
<------
-->
ZmHOX2a(2)
--------->
ANAC58
--------->
ANAC58
<------
--
ZmHOX2a(2)
--------->
ANAC46
<---------
ZAT18
-------
----
ARR14(2)
<---------
ALFIN1
--------->
ZAT18
=======
--->
ARR11(3)
<---------
REM1(2)
<---------
YAB1
=======
----
ARR11(3)
<---------
ETT(2)
<---------
ANAC46
=================================
--------
DOF2
--------->
ETT(2)
<-----------
RAV1(1)
<----------
DOF2
=======
--->
ARR14(2)
<---------
MYB52(1)
--------->
ANAC58
<---------
ANAC46
--------->
ZAT6
-------
ctttctttttcactttcttcgttgtctctctctgtctacacgcttgtgcttgtgttgtgtttgtgcgccactttctatctctactgttttcttctctcgt
3718200
<----------
DOF2
------->
ANAC58
------->
ANAC58
------>
HVH21
-----
REM1(2)
------
TGA1
------
HVH21
-->
bZIP60(1)
-->
O2
---
O2
<----------
DOF2
------
---
TGA1a
---------
-->
TGA1a
---------
============================
bZIP_DOF
<----------
DOF2
------>
ZmHOX2a(2)
=============
bZIP_DOF
--------->
At4g35610
<---------
ANAC58
--------->
ARR11(3)
===
bZIP_DOF
<---------
At4g35610
<---------
ANAC58
<---------
DAG2
---------
==================
bZIP_DOF
<---------
At4g35610
<---------
YAB1
<----------
DOF2
--------->
LBD16
-->
ANAC46
<----------
DOF2
----------->
GT1
<-----------
GT1
<----------
DOF2
cacggcttaacttttgcaatcttttagctgaagctaatttcaacaagttgttatttttgctttcaattttcttactttttgatctctcttttccacgaaa
3718300
--------------->
AGL15
<---------------
AGL15
<<<<<<<<<<<<<
AGL25
--------->
YAB1
<-----------------
AGL1
<---------
YAB1
<-----------------
AGL2
--------->
YAB1
----------------->
AGL3
--->
ARR14(2)
<-----------------
AGL3
--------->
TOE2(3)
>
ANAC46
<---------
ARR11(3)
<---------
YAB1
<------
>
ANAC58
<---------
LBD16
<----------
DOF2
<---------
YAB1
---------->
DOF2
>
ANAC58
<---------
GLK1(1)
--------->
ARR11(3)
<------------
CBF
<------------
CBF
cctcttataatagatttctcatttctgggtctaaaatctactttctatttttgggcattgatttttattcttagataaactagattgaaggcaaagaaac
3718400
--------->
GLK1(2)
<---------
ANAC46
--------->
ARR14(2)
<---------
ANAC58
<---------
GLK1(2)
<---------
ANAC55(1)
*
TSS
--------->
ANAC55(2)
<---------
ARR14(2)
<---------
ANAC58
<
<---------
HSFB2a(2)
<---------
ANAC55(2)
<
<------------------------
ANAC81
---------->
DOF2
<--
<---------
AHL20(2)
--------->
HSFB2a(2)
------>
ZmHOX2a(1)
<-------
-----
GT1
<-----------
GT1
<---------
GLK1(1)
--------->
MYB46(3)
<-----------
GT1
<-------
cattttttttttttttttttt
ctagattctctctaggtttccctaaatttctcaactactcctaaagagttttgttacgtttctgtgtgattctcctttt
3718500
--------->
RAP2.3(1)
<------
NtERF2
------>
NtERF2
<---------
ATERF1(1)
<------
NtERF2
--------->
RAP2.6(2)
<---------
DEAR3(1)
--------->
DEAR3(1)
<---------
RAP2.6(2)
<------
NtERF2
------>
NtERF2
------>
NtERF2
--------->
MYB46(2)
--------->
RAP2.6(2)
<---------
DEAR3(1)
<---------
TOE2(1)
<---------
ATERF1(2)
<---------
TOE1(1)
<---------
RAP2.6(2)
<------
ZmHOX2a(1)
--------->
ICU4
--------->
ATERF1(2)
<---------
ANAC46
<---------
ANAC46
<---------
ANAC58
--------->
MYB111(1)
<---------
ANAC58
<---------
ANAC46
--------->
MYB52(2)
---------
---------
ANAC58
<---------
ANAC58
<---------
ANAC58
<---------
MYB46(3)
<--------
---------
ANAC58
<---------
ANAC58
<---------
MYB46(3)
--------->
ATERF1(1)
<---------
TOE1(1)
---------
GT1
<---------
ANAC58
--------->
ALFIN1
--------->
RAP2.6(3)
<---------
TOE2(1)
<--
--
DAG2
<<<<<<<<<
CBP60g
<-----------
RAV1(1)
--------->
ALFIN1
<---------
MYB52(1)
---------
---
DOF2
<<<<<<<<<
SARD1
<---------
ARR14(2)
<---------
bZIP60(2)
<-------
GAMYB
<---------
GLK1(1)
tttcttgacgactccaaatttcgtttttgcgtaa
atggtggtgaagatgatgaagtggcggccatggccgccgttagttacgaggaaatacgaggtgaag
3718600
--------->
ATHB12
<---------
MYB46(3)
------>
ZmHOX2a(2)
<-------
TEIL
<------
ZmHOX2a(2)
--------->
GLK1(2)
--------->
REM1(2)
<---------
ARR14(2)
--------->
LBD16
--------->
ARR14(1)
<<<<<<
--------->
LBD16
--------->
ARR14(2)
<---------
ANAC46
<---------
GLK1(2)
------
<---------
ANAC58
--------->
ARR11(3)
<---------
LBD16
<---------
ARR14(2)
------
<---------
ANAC46
<------
MYB83
------->
TEIL
--------->
ARR14(2)
--------->
DAG2
<---------
ANAC55(1)
<------
MYB46(1)
--------->
MYB52(1)
<---------
GLK1(1)
---------->
DOF2
<---------
ANAC58
--------->
ALFIN1
--------->
ALFIN1
----------->
ARR10
============
>
ALFIN1
<--------
P
<---------
REM1(1)
--------->
ALFIN1
------>
ZmHOX2a(1)
-
REM1(1)
<---------
ANAC58
<------
MYB46(1)
<---------
TOE2(3)
============
--------
DOF2
<-------
GAMYB
<------
MYB83
<---------
At5g28300
--------->
DAG2
-->
HVH21
<---------
ANAC58
<---------
AtMYB61
--------->
MYB52(1)
---------->
DOF2
<----
ctttccgtgaagaagcttgagggttgggatctggtgagggaaggtgtaccggagaaagatagattaacggtggagattcgttggaaaggtcctaaggcga
3718700
<------
MYB83
<------
MYB46(1)
<---------
DEAR3(2)
<---------
DEAR4(1)
--------->
MYB46(2)
<---------
MYB46(3)
<---------
DEAR3(1)
<----------
DOF2
=============================
HOX2a_HOX2a
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
---------->
DOF2
==============================
HOX2a_HOX2a
--------->
ALFIN1
<---------
ARR11(3)
<-----------
RAV1(1)
--------->
ARR11(3)
<---------
At4g35610
<---------
ARR14(2)
--------->
ZAT2
--------->
ARR14(2)
<---------
ZAT2
<<<<<<<<<<<
LFY
<---------
DREB2C(2)
--------->
At4g35610
>
NtERF2
<---------
HSFB2a(2)
--------->
ANAC58
<---------
ANAC58
----->
RAV1(1)
<---------
ORA47(1)
--------->
ANAC58
--------->
DAG2
============
HOX2a_HOX2a
<XXXXXXXXXXXXXXXXXXXX
MIR396B
===========
HOX2a_HOX2a
<------
ZmHOX2a(1)
--------->
ALFIN1
<---------
ANAC58
--
NtERF2
--------->
HSFB2a(2)
<XXXXXXXXXXXXXXXXXXXX
MIR396A
--------->
At4g35610
cattgggatctttgagaaggtcggtgaagaggaatttcaccaaggaagctgtgggagaaagcgatgtcgtttcatgggaagatgaagagtttcagagctt
3718800
---------
<---------
ARR14(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ARR14(2)
----------->
ARR10
--------->
LBD16
--------->
ARR14(2)
<---------
YAB1
<---------
ARR14(2)
--------->
ZAT18
<---------
MYB52(1)
--------->
GLK1(2)
<---------
ZAT18
<------
ZmHOX2a(1)
--------->
YAB1
--------->
ZAT14
------------>
AtMYB77
<----------
DOF2
<---------
ICU4
atgttcactcacttcttacaaggacagtttgttttatccttgggagataactttctctgtcttcaccaat
gtaagttttaatcagtatccgaagatttga
3718900
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AGI:
At3g11760.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G04860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39924.1)
Range:
from: 3718422
to: 3721257
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.