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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<------
ZmHOX2a(1)
<---------
YAB1
--------->
AHL20(1)
=============
HOX2a_HOX2a
--------->
YAB1
<------
ZmHOX2a(2)
--------->
AHL20(2)
<---------
ARR11(3)
<---------
AHL20(2)
--------->
ARR11(3)
--------->
AHL20(2)
<---------
TOE1(2)
--------->
AHL20(2)
--------->
TOE1(2)
--------->
TOE2(3)
--------->
YAB1
<---------
AHL20(2)
<---------
ZAT18
----------->
GT1
--------->
TOE1(2)
--------->
AHL20(2)
--------->
ETT(2)
<---------
YAB1
----------->
GT1
<-------
TEIL
<--
ctatattgtccacattaaaaaaataatgctagaatgtgtaaatcgtaagatcataggactaaatacattttaatctcagaaatgaactatgtgaattatg
3312400
--------->
CCA1(2)
--------->
ATHB51
<------
ZmHOX2a(2)
<---------
YAB1
--------->
ARR14(2)
--------->
ICU4
<---------
ARR11(3)
<--------
HAHB4
<---------
ARR14(2)
--------->
YAB1
<---------
STY1(2)
<---------
ICU4
<---------
ANAC58
--------->
STY1(2)
-------->
ATHB1
<---------
ANAC58
<---------
ANAC58
<---------
ATHB12
<---------
ANAC46
<---------
ANAC58
--------->
ICU4
<---------
ANAC55(2)
==========================
HOX2a_HOX2a
--------->
WOX13(1)
<---------
ANAC55(1)
<------
ZmHOX2a(1)
--------->
AGP1
<---------
ATHB12
<---------
AHL20(2)
------->
TEIL
<-
-------
ANAC46
<---------
ANAC46
--------->
ICU4
<---------
YAB1
--------->
ANAC55(2)
gagtctaagaggagaatgcgtctagctagatccacaaaccaataccagtactaatcaatcattatgtttataattgaaacttatacgtgtatgtaaattc
3312500
<---------
ICU4
--------->
YAB1
------->
TEIL
--------->
YAB1
--------->
ANAC58
--------->
MYB52(1)
--------->
ANAC58
<---------
MYB46(2)
--------->
SPL7
<---------
MYB52(2)
<---------
SPL7
<---------
MYB111(1)
--------->
TOE2(3)
<---------------
AtSPL3
--------
MYB52(2)
<---------
ATHB12
<----------
DOF2
------>
NtERF2
<------
cactaactaacaaaaatcataactcatcactcattaatcttatatacttac
tcatgtgtttctttggtccatatagttctctcggcctggtacgaacttt
3312600
<---------
YAB1
==================================
HOX2a_HOX2a
<------
ZmHOX2a(2)
--------->
ARR11(3)
--------->
ATHB12
<---------
ARR11(3)
------>
ZmHOX2a(1)
--------->
ANAC58
---------->
DOF2
--------->
TOE2(3)
--------->
ANAC58
<---------
CCA1(2)
<---------
ANAC46
--------->
TOE1(3)
--------->
DAG2
------>
ZmHOX2a(2)
<---------
ANAC58
-
<---------
ARR11(3)
---------->
DOF2
<------
ZmHOX2a(2)
<---------
ANAC58
-----
<---------
ARR14(2)
<------
ZmHOX2a(1)
<---------
ARR14(2)
<---------
WRKY18(1)
--------->
YAB1
--------->
ARR14(2)
==========================
HOX2a_HOX2a
--------->
WRKY38(1)
------>
ZmHOX2a(1)
<---------
CCA1(2)
===========================
HOX2a_HOX2a
--------->
WRKY12
===============
----
DOF2
--------->
AHL20(2)
--------->
ARR14(2)
--------->
ATHB12
--------->
TOE2(3)
gagccatatccttagtcaattcattaggaaaagctactcgactggatcccatctctaaaagatcattgaccaattccttgtaatgctccttaacatcatc
3312700
<---------
ZAT18
<----
<---------
ALFIN1
--------->
ZAT14
<----
<------
NtERF2
<---------
ZAT14
<----
----------->
RAV1(1)
--------->
DAG2
<---------
ARR11(3)
----------->
HVH21
--------->
DAG2
--------->
ARR11(3)
<------
ZmHOX2a(2)
--------->
DEAR3(1)
---------->
DOF2
--------->
TOE2(3)
<------
-------->
DEAR3(1)
<------
NtERF2
---------->
DOF2
--------------------->
WRI1
---->
MYB46(3)
<---------
DEAR3(1)
--------->
ANAC58
<---------
ZAT18
<-------
=========
HOX2a_HOX2a
------>
NtERF2
--------->
ANAC58
--------->
ZAT14
------>
ZmHOX2a(1)
caccgatctatccacatactcggcgacactctcaaaccgagtaagcaaaaaggcagtgaacatcaccagtgcatccttgaacatctcgttctcctctgtc
3312800
<---------
ARR14(2)
------->
TEIL
--------->
GLK1(2)
---------
-----
ANAC58
--------->
ARR14(2)
<---------
AHL20(2)
-----
ETT(2)
<---------
ICU4
<------
ZmHOX2a(1)
<---------
ANAC46
--------->
AHL20(2)
-----
ANAC58
<---------
YAB1
*
TSS
--------->
ANAC46
------->
TEIL
<-----------
TBP
-----
HVH21
<---------
ATHB12
<---------
TOE1(3)
----------->
GT1
--------->
ZAT14
----
RAV1(1)
--------->
ICU4
<---------
TOE2(3)
--------->
MYB52(1)
<---------
ZAT14
gtccatgaattttcagccat
gattcccaaaacaaat
taaggaaaatgaagtctacaaaacagaatggtgtgaatctggagaactacagtatatataataa
3312900
--------->
AHL20(1)
--------->
ANAC55(2)
--------->
WOX13(1)
--------->
ARR11(3)
<---------
ZAT2
--------->
ANAC58
<------
NtERF2
<---------
ANAC55(2)
<-----------
GT1
<---------
At4g35610
--------->
AHL20(2)
<---------
TOE2(3)
--------->
At4g35610
--------->
AHL20(2)
----------->
GT1
--------->
CCA1(2)
--------->
ANAC46
<---------
ANAC58
--------->
ARR14(2)
--------->
ANAC58
<---------
ANAC58
<---------
ANAC46
<-------
>
YAB1
<---------
ARR14(2)
--------->
At4g35610
<---------
ANAC58
<---------
ANAC58
<-------
ctcatgtaagggatatggcagcttataaatcaactcaagtaacaaaaaatatatggcttctcttctctcaaattggggtgtattaagtttccttcctttt
3313000
<----------
DOF2
<---------
ARR14(2)
<---------
AHL20(1)
--------->
AHL20(1)
--------->
AHL20(2)
<---------
WOX13(1)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
WOX13(1)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
At5g28300
<-----------
GT1
<---------
AHL20(1)
<---------
AHL20(2)
--
DAG2
---------->
DOF2
--------->
ARR11(3)
<----------
DOF2
<----------
DOF2
---
DOF2
----------->
GT1
<---------
GLK1(2)
---------->
DOF2
<-----------
GT1
<---------
YAB1
-
tcttatattcaaagggtaaattttatttcagattttgctatattgcatacaaagtctttattttatttctttctactgatttattgtcattcatttagtt
3313100
<---------
AHL20(2)
<---------------
AtSPL8
------->
MYC3
<---------
AHL20(2)
<---------
ANAC58
<-------
MYC3
<---------
AHL20(1)
<---------
ANAC55(2)
------->
MYC4
--------->
AHL20(2)
<---------
ANAC58
--------->
O2
--------->
AHL20(2)
<---------
ANAC55(1)
--------->
ANAC55(2)
<---------
AHL20(2)
--------->
ANAC55(2)
<---------
ANAC55(2)
<---------
AHL20(2)
<---------
ANAC46
<---------
AHL20(2)
--------->
AHL20(2)
<---------
TOE2(3)
<-------
TEIL
<---------
AHL20(1)
<-------
MYC4
<---------
YAB1
<-----------
GT1
--------->
CCA1(2)
<---------
YAB1
--
------>
ZmHOX2a(1)
<---------
ICU4
--------->
YAB1
--------->
AHL20(1)
------->
MYC2
<----------
DOF2
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
<-------
MYC2
<---------
ARR11(3)
--------->
YAB1
<---------
GLK1(2)
<---------
AHL20(2)
--------->
TGA1a
<---------
CCA1(2)
<---------
YAB1
--------->
YAB1
--------->
AHL20(2)
<---------
O2
----->
ZmHOX2a(1)
--------->
YAB1
--------->
WOX13(1)
--------->
REM1(2)
<---------
TGA1a
tcctatatcctttttattaaatttgttttataatattgacgattttagccaattagattatgatacgtgtacaaataaatttttattttcacacgtgtta
3313200
<---------
ANAC55(1)
--------->
ANAC55(2)
----------->
GT1
<---------
ANAC58
------->
MYC4
<-------
MYC4
<---------
ANAC46
------->
MYC3
------->
MYC2
<---------
ANAC58
<-------
MYC4
------->
MYC4
<---------
ANAC55(2)
<-------
MYC3
<-------
MYC3
<-------
TEIL
<-------
MYC2
<-------
MYC2
--------->
CCA1(2)
------->
MYC2
------->
MYC3
--------->
YAB1
--------->
TGA1a
<---------
ANAC55(2)
<---------
YAB1
<---------
ANAC55(2)
<---------
TGA1a
--------->
YAB1
<---------
TGA1a
--------->
TGA1a
<---------
ICU4
<---------
O2
<---------
O2
>>>>>>>>>
MYB98
--------->
ICU4
--------->
YAB1
--------->
ANAC55(2)
<----------
--------->
YAB1
--------->
WOX13(1)
<---------
TOE2(3)
--------->
AHL20(2)
<---------
ATHB12
<---------
At5g28300
--------->
ANAC55(2)
--------->
O2
<---------
AHL20(2)
------->
WOX13(1)
<-----------
HVH21
--------->
O2
<---------
AHL20(2)
--------->
AHL20(2)
gcaatcagaattatgatacgtgttacagccaattagattataacacgtgtataaacaaatttatgttttcacacgtgttaaaaattaaaaatttaacata
3313300
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AGI:
At3g10595.1
Description:
myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G04760.1); similar to I-box binding factor [Solanum lycopersicum] (GB:CAB65169.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778)
Range:
from: 3311790
to: 3312836
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.