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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
---------
--------->
DAG2
<------
ZmHOX2a(1)
----------->
GT1
--------->
GLK1(2)
--------->
ANAC58
---------->
DOF2
--------->
ANAC46
--------->
At4g35610
<----------
DOF2
<---------
TOE2(3)
---------->
DOF2
<---------
At4g35610
--------->
GLK1(1)
<----------
DOF2
--------->
ANAC58
--
attctcttcaacgtttgagttcttagacat
ctgaaagtatctataggaaatcgaaaggctttgtctttgggtttaagaattcaagaaattggtaaagtaa
1837600
<------
MYB46(1)
<------
MYB83
--------->
MYB111(1)
--------->
MYB59
--------->
MYB46(2)
<--------
P
<------
MYB46(1)
<------
MYB83
----------->
TGA1
<---------
ANAC46
<---------
ICU4
<---------
ANAC58
--------->
YAB1
<-----------
ARR10
--------->
ICU4
<---------
ARR14(2)
<----------
DOF2
<---------
ATHB12
--------->
ANAC58
<---------
AtLEC2
<---------
MYB52(1)
--------->
GLK1(1)
--------->
ANAC58
<---------
ANAC58
<---------
ANAC58
-->
GT1
<---------
GLK1(1)
<---------
REM1(1)
<----------
DOF2
<---------
ANAC58
--------->
YAB1
-------->
DOF2
<---------
YAB1
<------
ZmHOX2a(1)
--------->
MYB52(2)
--------->
ICU4
aaaaagagggaaatcatgacgaatgaagatgaagcaagtagaggaactttgcttggtaggtcagtttcgtttcttttagtttaaaatgatgaagaatgaa
1837700
<---------
ARR14(2)
--------->
ATHB12
--------->
ANAC58
<---------
ATHB12
<---------
YAB1
--------->
ANAC58
<----------
DOF2
--------->
ICU4
<-----------
HVH21
<---------
ANAC46
<---------
TOE2(3)
------->
MYC3
--------->
ARR14(2)
<-----------
RAV1(1)
--------->
ICU4
<-------
MYC3
<------
ZmHOX2a(1)
------->
TEIL
<---------
DAG2
--------->
GLK1(2)
tgaatgatgcgaaaaacatgtgtcaaggaaacgaggaaacactcgtggatggatgttttgttgcgcttttccaatggagaaactgaaataatgtttggat
1837800
--------->
ARR14(2)
---------->
DOF2
--------->
GLK1(2)
--------->
ANAC58
--------->
ARR14(2)
--------->
ANAC58
<----------
ID1
----------->
RAV1(1)
<---------
ARR14(2)
--------->
YAB1
---------->
DOF2
----------->
GT1
<---------
ARR14(2)
---------->
DOF2
ttttttcagacaaaagaagacgaagagagaagaatattggtaacaacaacaatggcgattcggttcgaatccagacaagcgaaaatcaaaagaaaactct
1837900
<---------
ANAC58
<---------
ANAC58
--------->
ALFIN1
--------->
ALFIN1
<---------
ANAC46
------>
ZmHOX2a(1)
<------
ZmHOX2a(1)
--------->
GLK1(2)
---
---------->
ID1
<-----------
RAV1(2)
<---------
ARR14(2)
--------->
ATHB12
<----------
DOF2
<----------
DOF2
--------->
YAB1
<-------
TEIL
<---------
MYB46(3)
*
TSS
<----
caactttctcttcttgtccttttgtgttcacattcacaaggagagagatagatgcaggagtggctattggttgagaatcgtggggttttt
gaattatggg
1838000
<----------
<--------
ATHB1
--------->
ATHB12
-------->
HAHB4
<---------
ICU4
--------->
ATHB51
<---------
YAB1
<---------
ATHB12
<---------
ATHB51
--------->
AHL20(2)
<---------
ICU4
<---------
AHL20(2)
<---------
AHL20(2)
<----------
DOF2
--------->
AHL20(2)
--------->
AHL20(2)
<---------
WOX13(1)
<---------
AHL20(2)
<---------
At5g28300
--------->
ICU4
<---------
ATHB12
----------->
GT1
<-----------
GT1
--------->
YAB1
--------->
CBF
<---------
AHL20(2)
--------->
GLK1(2)
------------>
CBF
<---------
AHL20(2)
<------
-----
PCF2
------>
ZmHOX2a(1)
<-----------
GT1
<-----------
GT1
<---------
YAB1
<---------------
AGL15
tccaattaattcctctttatttgttttttgtttaccctagaagaatcgaaaaaaacttactcttcaatttaccctgattaattttttctaataattgaga
1838100
--------->
LBD16
--------->
HSFB2a(2)
<------------
<---------
HSFB2a(2)
-------------
<---------
ARR14(2)
--------->
ARR14(2)
---------->
DOF2
--------->
YAB1
--------->
HSFB2a(2)
<---------
YAB1
<---------
HSFB2a(2)
<-------
TEIL
<------
ZmHOX2a(1)
--
<---------
GLK1(2)
<---------
TOE1(3)
--------->
YAB1
--
--------->
TOE2(3)
--------->
TOE1(3)
----------->
GT1
------
--
CBF
<----------
DOF2
--------->
ARR11(3)
<---------
TOE2(3)
---------->
DOF2
--------------
---
TOE2(3)
<----------
DOF2
--------->
TOE2(3)
<---------
WRKY12
--------------
taaatctgtgcttttgtagtaactttagattttgtagaaccttgaaagtgaaggttcataactaattaagaagtcaaaggataatagtatccagaaacag
1838200
--------->
MYB46(3)
<-----------
GT1
---
AGL15
-->
AGL15
------>
ZmHOX2a(1)
------->
ANAC58
--------->
LBD16
-----
------->
ANAC58
<-----------
GT1
-----
----->
GT1
--------->
AHL20(2)
--------->
YAB1
--------->
GLK1(1)
--->
AGL3
<---------
AHL20(2)
--------->
YAB1
<---------
GLK1(1)
--->
AGL2
------->
GAMYB
<----------
DOF2
--------->
WOX13(1)
<-----------
HVH21
-----
taagaaattaaccacagtttaaataactttcctgaacaaatattcttccaatctacaattagtcaattactaataacaacaggtcagaattcttacacac
1838300
<-
<--
<--
<--
---------
---------
---------
------->
MYC2
<-------
MYC2
------->
MYC3
<-------
MYC3
<---------
AHL20(2)
<---------
WOX13(1)
--------->
ANAC58
--------->
AHL20(2)
--------->
ATHB12
--------->
ANAC58
--------->
AHL20(2)
<---------
AHL20(2)
--------->
ANAC46
<---------
AHL20(2)
<---------
YAB1
<---------
REM1(2)
<---------
AHL20(2)
--------->
AHL20(1)
--------->
ATHB51
<---
--------->
AHL20(2)
<---------
AHL20(1)
<---------
ICU4
-------
<---------
AHL20(1)
--------->
AHL20(2)
<--------
ATHB1
------>
NtERF2
---->
ANAC46
<-----------
GT1
<---------
AHL20(2)
--------->
YAB1
<-------
---->
ANAC55(1)
<----------
DOF2
--------->
YAB1
<---------
ATHB51
<------
NtERF2
---->
YAB1
---------->
ID1
<-----------------
AGL3
<-----------
GT1
<---------
AHL20(2)
----
ataatttttttaatttgtttcttttgtaacaaaactacttaatataattggtttgctagtaattttacaacgttgtatgaataattgtttacacgcgcct
1838400
<-----------
HVH21
<---------
PCF2
<------
NtERF2
--------->
ALFIN1
<-------
GAMYB
------->
MYC2
--------->
MYB55(2)
<-------
MYC3
<---------
MYB46(3)
------->
PIF5
<---------
ANAC58
<-------
PIF5
<---------
ANAC46
<-------
MYC2
<---------
ANAC58
<------
NtERF2
<---------
LBD16
--------->
TGA1a
---------
DOF2
<---------
ANAC58
<---------
TGA1a
-------
ANAC58
<---------
ANAC46
<---------
ANAC58
-------
AtLEC2
<---------
ANAC58
<---------
ANAC46
-------
ANAC58
<---------
SPL7
--------->
ALFIN1
>
ANAC58
<---------
ANAC58
<---------
YAB1
<---------
ANAC58
<-
>
ANAC58
<---------
ANAC58
--------->
AHL20(2)
------->
MYC3
---
>
ANAC46
<---------
ANAC46
<---------
ANAC58
------>
NtERF2
<--
------
ZAT2
<---------
ARR11(3)
<---------
ANAC58
<---------
ANAC58
--------
-->
ATERF1(1)
--------->
YAB1
<---------
ANAC46
<---------
ANAC46
---------
--
ATERF1(1)
<------
ZmHOX2a(2)
--------->
ALFIN1
----------->
GT1
<---------
ANAC58
--------->
ATHB12
----->
ZAT2
--------->
ARR11(3)
--------->
ALFIN1
----------->
GT1
<---------
DEAR3(1)
<---------
YAB1
gcttggcgggtgagatcattcatgtcgtagcgagtggggagggcaagcgtgtaagttaaaatagtgcgaaggcgcgtgggacaaaatgttatgagtggtg
1838500
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AGI:
At3g06080.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71110.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253)
Range:
from: 1834713
to: 1837990
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.