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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
----------->
GT1
----
ANAC55(2)
--------->
YAB1
--->
ANAC58
--------->
YAB1
--->
ANAC58
<--------
HAHB4
------->
MYC3
--->
ANAC46
<---------
YAB1
--------->
ICU4
<-------
MYC3
-->
AGL15
<---------
AHL20(2)
<---------
YAB1
------->
TEIL
<--------
---
AGL15
<-----------
GT1
---------->
DOF2
<---------
YAB1
--------->
AtLEC2
---------
----
AGL1
<----------
DOF2
<----------
DOF2
--------->
TOE1(2)
--------->
WOX13(1)
--------->
AHL20(2)
caaatggaataaaactataactttactattttatgctttcaaaaaactaaaagtacgagctattattagtctatcaccatgcacatgagtcgatttaatt
1225500
------->
GAMYB
<---------
ALFIN1
<---------
MYB111(2)
<---------
ZAT18
<---------
MYB55(2)
--------->
ZAT14
<---------
CCA1(2)
--------->
MYB46(3)
<---------
At4g35610
<---------
MYB52(2)
--------->
At4g35610
--------->
YAB1
--------->
HSFC1(2)
------>
NtERF2
--------->
TOE1(1)
<-----------
GT1
----------->
RAV1(1)
-
-
AHL20(2)
--------->
TOE2(1)
<----------
ID1
<---------
HSFC1(2)
--
>
AHL20(2)
------>
ZmHOX2a(1)
--------->
ANAC46
<---------
GLK1(1)
<-
tgcagcccactcttattcctcgtatcatattagtcacttactacgacaagtttaactttggaaacctccaacaaacctatttgagactatgtggtttcga
1225600
<---------
TOE1(3)
--------->
ARR14(2)
<
<---------
AtMYB61
------->
TEIL
----
<---------
TOE2(3)
<---------
CCA1(2)
----
<-------
GAMYB
--------->
ATHB51
<---
<---------
MYB46(3)
--------->
ATHB12
<-----
<---------
At4g35610
--------->
AHL20(2)
------
--------->
ARR14(2)
<---------
AHL20(2)
<--------
<---------
TOE1(3)
--------->
At4g35610
<---------
ICU4
---------
<---------
TOE2(3)
<---------
bZIP60(1)
--------->
ICU4
---------
-------->
ATHB12
--------->
bZIP60(1)
--------->
AHL20(2)
<------
ZmHOX2a(1)
------->
ICU4
---------->
DOF2
<---------
ARR14(2)
<---------
AHL20(2)
--------->
YAB1
<-----
--------
YAB1
<---------
ZAT6
<---------
At4g35610
----------->
GT1
<---------
ARR14(2)
----------->
GT1
tatgattagggtttagagttaaagagtggcatcagataccgctgttgaggttgaatagtttaattatttgtatctgaactataaaaacaggaaataaaat
1225700
--------->
AHL20(2)
---------
AHL20(2)
----->
AHL20(2)
-----
----->
AHL20(1)
-----
------
AHL20(1)
<----
----
AHL20(1)
------
--->
AHL20(1)
<---------
YAB1
--------->
AHL20(2)
-
AHL20(2)
<---------
YAB1
--------->
YAB1
>
AHL20(1)
----------->
GT1
<-----------
GT1
--------->
AHL20(2)
>
AHL20(2)
--------->
DAG2
----------->
GT1
--------->
YAB1
----
AHL20(2)
---------->
DOF2
---------->
DOF2
<---------
YAB1
--------->
HSFB2a(2)
------
attttaaatctacatatttgtaaagaagaaatagaaaaagtcaaaaacaattctgatttgttactataatttcttccaggctccactaaaaataaaaata
1225800
<-----------
GT1
----------->
GT1
----------->
GT1
--------->
ARR11(3)
------->
TEIL
<----------
DOF2
<-----------
ARR10
<---------
ARR14(2)
----------->
GT1
---->
ARR14(2)
<---------
ARR11(3)
--------->
ARR14(2)
<------
MYB83
---->
ARR11(3)
--------->
RVE1(1)
--------->
GLK1(2)
<------
MYB46(1)
-----
ARR11(3)
--------->
CCA1(1)
--------->
ANAC46
--------->
MYB59
---------
--->
CCA1(1)
----------->
GT1
--------->
LBD16
--------->
LBD16
<---------
AtMYB61
--->
RVE1(1)
---------->
DOF2
<---------
LBD16
<---------
LBD16
<---------
MYB52(1)
-------
tcttcttcttttttttttttttttttgtaaaagacagaaatatctaatccggtttatacgaatccggtttaaaatcggtttggttttgttacaaagataa
1225900
<------
<---------
ALFIN1
------>
ZmHOX2a(1)
*
TSS
<---------
ALFIN1
------>
ZmHOX2a(1)
-
--------->
ARR11(3)
--------->
REM1(1)
--------->
TOE2(3)
-
<-----------
GT1
<---------
ALFIN1
--------->
ANAC58
<---------
ARR14(2)
<----
>
YAB1
--------->
YAB1
<---------
REM1(2)
--------->
ANAC58
--------->
ARR14(2)
<-----
-->
CCA1(2)
<---------
ARR11(3)
----------->
RAV1(1)
<---------
At5g28300
--------->
TOE1(3)
-
gaccagattaataacatcttcgtcttc
acacactctgcaacacctctcactcaaatttcattcacc
atgttctctctcaaatccttaatctcctcacctt
1226000
-------->
P
--------->
ANAC46
--------->
MYB52(1)
------>
MYB46(1)
------>
MYB83
--------->
DEAR3(1)
<---------
ALFIN1
<---------
ALFIN1
--------->
ANAC46
<---------
MYB111(1)
--------->
ARR14(2)
--------->
ANAC46
<---------
MYB55(2)
------->
TEIL
--------->
ANAC58
--------->
AtMYB61
<---------
SPL7
<---------
At5g28300
---
--------->
ANAC58
<---------
MYB111(2)
--------->
TOE1(1)
<---------
At5g28300
---
DAG2
--------->
MYB46(3)
<---------
MYB46(2)
--------->
ANAC58
<---------
DOF5.7(2)
-------->
ANAC46
--------->
MYB46(3)
--------->
ANAC46
--------->
ARR14(2)
-------->
ANAC58
<-----------
GT1
----------->
HVH21
--------->
ANAC55(2)
<---------
MYB52(1)
-------
HVH21
<---------
ATHB12
--------->
MYB55(1)
<---------
MYB52(1)
<---------
MYB52(1)
-------
-----
DOF2
--------->
AtMYB61
--------->
MYB46(3)
----------->
GT1
<---------
ANAC55(2)
--------->
DOF5.7(2)
-------->
ANAC58
--------->
KAN4(1)
--------->
MYB46(3)
--------->
ANAC58
<-----------
HVH21
---
tcacacaatccaccactcatggattattcaccaacccgattacccgacccgttaatccattaccacgtaccgtttccttcaccgttaccgcttccatgat
1226100
<---------
At4g35610
--------->
At4g35610
--------->
DEAR3(1)
<---------
ZAT2
<---------
ALFIN1
--------->
ZAT2
<---------
MYB52(1)
------>
ZmHOX2a(1)
--------->
MYB46(3)
--------->
TOE2(3)
-------->
P
--------->
AtMYB61
<------
ZmHOX2a(2)
<---------
MYB46(2)
<---------
ARR14(2)
--------->
AtMYB61
--------->
ARR14(2)
<---------
MYB111(2)
<---------
GLK1(2)
<---------
MYB111(1)
<---------
ARR11(3)
--------->
MYB46(3)
--------->
MYB46(3)
--------->
ARR14(3)
----------->
RAV1(1)
<---------
ETT(1)
<---------
ARR14(3)
--------->
ANAC58
------>
MYB83
--------->
DREB2C(2)
--------->
ARR11(3)
--------->
ANAC58
------>
MYB46(1)
<-----------
TGA1
------>
MYB46(1)
--------->
RVE1(1)
--------->
DEAR3(1)
--------->
MYB55(1)
--------->
At4g35610
<
----------->
ARR10
------>
NtERF2
<---------
MYB55(2)
<---------
At4g35610
<
---------->
DOF2
<---------
YAB1
--------->
LBD16
--------->
MYB46(3)
<---------
MYB52(1)
<
------>
ANAC58
--------->
YAB1
<---------
DEAR3(1)
--------->
MYB46(3)
<-----------
HVH21
------->
GAMYB
-->
YAB1
------>
ZmHOX2a(2)
<---------
LBD16
--------->
AGP1
--------->
DEAR3(2)
-------->
P
------>
ANAC58
<---------
MYB52(2)
--------->
SPL7
--------->
At4g35610
<---------
MYB55(2)
------>
MYB83
acccaaaagatcctcagctaacatgattcccaaaaaccctccggcgaggcaacagctctaccaaccgttccgaccaccgtcatctcccattccaacccaa
1226200
------>
NtERF2
--------->
LBD16
<---------
CCA1(2)
--------->
ANAC46
<---------
ARR14(2)
<---------
CCA1(2)
--------->
DEAR3(1)
------->
TEIL
<---------
ATERF1(1)
<---------
ALFIN1
--------->
ANAC46
--------->
ARR14(2)
--------->
ANAC55(2)
<---------
ZAT14
--------->
At5g28300
<---------
ANAC55(2)
--------->
ZAT14
--------->
LBD16
<-----------
HVH21
--------->
ANAC46
<---------
ZAT18
----------->
GT1
--------->
ANAC46
--------->
ANAC58
<---------
MYB52(1)
<---------
GLK1(1)
--------->
ANAC58
---------
ANAC58
--------->
ATERF1(2)
<---------
SPL7
--------->
ARR14(2)
<----
---------
ANAC58
<---------
ATERF1(2)
<---------
DEAR3(2)
<---------
ARR14(2)
<----------
DOF2
---------
ANAC46
<---------
LBD16
------>
ZmHOX2a(1)
----------------------->
TaNAC69(2)
<------
ttccgttcactcgactccgccggtaaaatcgaaatcctcgccggtcgaatggctctctggttcgaatacgcacctcttatctcttctctttacaccgatg
1226300
<---------
ANAC58
------->
GAMYB
<---------
ANAC58
<---------
ATHB12
--------->
ANAC58
<-------
TEIL
<---------
MYB55(2)
<---------
GLK1(2)
--------->
ANAC58
-------->
P
<---------
ARR14(2)
<---------
DEAR3(2)
------>
MYB83
<---------
LBD16
<---------
MYB46(3)
------>
MYB46(1)
--------->
MYB52(1)
<---------
DREB2C(2)
<---------
MYB111(2)
--------->
LBD16
<---------
DEAR3(1)
------>
ZmHOX2a(1)
----------->
HVH21
<---------
At1g77200
--------->
ANAC46
<-----------
ARR10
--------->
ANAC58
<-----------
HVH21
<-----------
GT1
<---------
ARR11(3)
----------->
GT1
--------->
ANAC58
-----
MYB46(3)
--------->
ARR11(3)
--------->
ARR14(2)
<---------
ZAT18
---
MYB52(1)
--------->
MYB46(3)
--------->
ARR14(2)
<---------
ARR14(2)
--------->
ZAT18
gtttcactcctccaaccatcgaagaactcaccggaatctcaagcatcgaacagaaccgtttaatcgtcggtgcgcaagttcgtgactcaattcttcaatc
1226400
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AGI:
At3g04550.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G28500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65032.1)
Range:
from: 1225928
to: 1227442
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.