Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     --------->ATHB51  <------MYB83    <---------ANAC58                             <---------ATHB12   --------->AHL20(2)<------MYB46(1) <---------ANAC58                   --------->At5g28300 -------->TOE2(3)   --------->MYB59  <---------ANAC46                  ----------->GT1              x -DAG2  <---------At5g28300 --------->ARR14(2)                       --------->ZAT14               -- --DOF2<-----------GT1      <---------ARR14(2)                       <---------ZAT14               --   ttccataatttaccccaaaaatttggtccaaatccaatgccttggtttcaatttgggaacaaatatttgactacagtaaatacaatcaattgacaaaaca  1031300           <------NtERF2         --------->ATERF1(2)                           --------->YAB1         <---------ANAC46                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <---------At1g77200                    --------->TOE1(3)         --------->ETT(1)                     <---------TOE1(3)        --------->RAP2.6(3)              --------->GLK1(2)       --------->REM1(2)                 <-----------ARR10--------->YAB1      --------->ALFIN1 ----------->GT1   --------->ARR11(3)       ---------->DOF2 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <---------ARR11(3)<---------TOE2(3)                       -- xxxxxxxxxxxxxxx>smallRNA(i)            --------->RVE1(1)<---------YAB1                            <- ------->YAB1   --------->YAB1  <xxxxxxxxxxxxxxxxsmallRNA(i)----------->GT1                       --- ------->AHL20(2) <---------AHL20(2)  --------->AHL20(2)<---------AHL20(2)                    -------   ataaaactgtgtcggcaaaaataatcggtttaaaaaaaaaaaaaatctaagcttagattataatgttacaaagaaaattgttttgtttataaacttttaa  1031400               <-----------GT1          <---------RVE1(1)   --------->ARR11(3)                  --------->ARR11(3)                               <---------ARR14(2)   <---------ARR11(3)                 <------ZmHOX2a(1)                <---------HSFB2a(2)  <---------CCA1(2)       <----------ID1<---------CCA1(1)              --------->HSFB2a(2)       <--- ------->AHL20(1)         ----------->GT1    <-----------------AGL1   <---------LBD16   --------->ARR14(2) --------AHL20(1)       ---------->DOF2<---------ARR11(3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----- ------>AHL20(2)  --------->TOE2(3)  ----------->GT1    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --------- -->AHL20(2) <---------AHL20(2)---------->DOF2 --------->LBD16    <----------DOF2--------->GLK1(2)   atatatatctataatttaaaccacaaaaaagaaaaaagaaggatatttccccaattcgaaatgtaaggcttttctggacaaagaatcaagaatacggttt  1031500                                               --------->CCA1(2)                                              <---------ARR11(3)       <---------AHL20(2)                                              --------->ARR11(3)      --------->AHL20(2) ----------->GT1     <xxxxxxxxxxxxxxxxsmallRNA(i) ---------->DOF2 ----------->GT1              <xxxxx ------AHL20(2)  --------->ATHB12     --------->ICU4          <---------ARR14(2)           --------->ATHB12 ---->AHL20(2)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          --------->ARR14(2)   ----------->GT1 -->GT1  ----------->GT1           --------->AHL20(2)   <------ZmHOX2a(1)  ----------->GT1xxxxxxxxxxx   aaattgttaaatggagaaatgaatgggtcattaatctataaatatgaagatataaagaggaaagaatacggtttaaattgttaaatggagaaatgaatgg  1031600                                                    <------MYB83                                                    <------MYB46(1)                     --------->CCA1(2)            <--------P                    --------->ARR11(3)            --------->ALFIN1                    <---------ARR11(3)           <---------MYB52(1)            --------->ICU4                    <---------ANAC46            --------->DAG2         --------->AHL20(2)          <-----------HVH21  ------------>CBF ---------->DOF2 xxxxxxxxxxxsmallRNA(i) ---------->DOF2     --------->ALFIN1  ----------->GT1                   ----- xxxxxxxxxxx>smallRNA(si3)    <------ZmHOX2a(1)<---------MYB46(3) --------->AHL20(2)      -----------   gtcattaatctataaatatgaagatataaagaggaaaactgtcaaggagcgggtaggggtcaatttgttaaaatataaagttaggggctgatttgtaaaa  1031700                                                         --------->ZAT14                                                         <---------ZAT14                                                       --------->ANAC46                                                       <---------bZIP60(1)                                                 *TSS  --------->bZIP60(1)                                    <-----------GT1  --------->YAB1                                   <-----------GT1--------->WOX13(1)                            <----               --------->YAB1     <---------AHL20(2)<---------ATHB12                           <-----  <---------YAB1          <---------ARR14(2)    ------------>CBF                             <------- ------->CBF  <---------YAB1 ------------>CBF --------->ANAC46                      <---------ATHB12 >GT1    ------->TEIL  ------------>CBF    --------->ZAT14             --------->ATHB12<---------MYB52(1)   caatatgaatgaacttataatgagggccaatcccaatttatcttcttcactccaatcacatcactgctaagactcattgaattcaaatcgttatgtctac  1031800                     <---------At4g35610                     --------->At4g35610                     <---------ATERF1(1)                     ------>NtERF2                    --------->RAP2.3(2)                    --------->DEAR3(1)                   --------->DEAR4(2)                   --------->RAP2.3(1)                 ------->GAMYB                 --------->ANAC46                 --------->DEAR3(1)                --------->ATERF1(1)                              --------->LBD16                --------->DEAR3(2)                              <---------ANAC46           --------->ANAC58                              <-----------ARR10           --------->ANAC58                           --------->DEAR3(1)      --------->WOX13(1)        <---------LBD16      <---------LBD16                             ----  --------->YAB1<---------MYB55(2)                   <---------At4g35610                 ============ <-------TEIL   <------------AtMYB77  <---------HSFB2a(1)--------->ARR14(2)              <------ZmHOX2a(2) -----ALFIN1    --------->MYB46(3) <------NtERF2   <-----------GT1                      <---------ARR14(2) ----REM1(2)   <---------ATERF1(1)--------->LBD16<-----------HVH21                      --------->ARR14(2) --ETT(2)  --------->ANAC46------>ZmHOX2a(1)<------NtERF2<---------ARR14(2)  <------NtERF2       <---   acattcatcaatctcgcaaccgccgcttcctctcgccggaagagtcgccattgtcaccggctcttcccgtggtattggccgagcgatagcgatccactta  1031900                                                           <---------ANAC46                                                           <---------ANAC58                                                         <-----------HVH21                                                      <---------ANAC58                                                      <---------ANAC58                                                  --------->DEAR3(1)                                                 <------NtERF2        <------ZmHOX2a(2)                                                 <----------CDC5     <---------ARR11(3)                                                 ======================MYC_MYB                                                ------>NtERF2<---------O2                                               --------->ANAC46      --------->ARR11(3)                                              --------->SPL7 <---------ANAC58                                            ----------->HVH21<---------ANAC46          --------->MYB59                                            --------->DEAR3(1)      --------->GLK1(1)<---------MYB52(1)                                           <------NtERF2--------->ALFIN1   <--------ATHB1                                           <-----------RAV1(2) <------NtERF2      <---------------AGL15                                           --------->ATERF1(1)<-----------HVH21  ----------------->AGL2                                          <---------At4g35610<---------TGA1a     ----------------->AGL1                                          --------->LBD16--------->REM1(2)<---------ATHB12  ---------              <------ZmHOX2a(1)           --------->At4g35610--------->O2 --------->ICU4<---------HSFB2a(2)          <---------ANAC46               --------->RAP2.6(2) <---------ANAC58    <-----------------AG          <---------ANAC58               --------->DEAR3(1)<---------ANAC58--------->YAB1   ---------          <---------ANAC58               ----------->RAV1(1) --------->TGA1a     <-----------------AGL2     <---------DEAR3(1)             ---------->DOF2------>NtERF2<---------DEAR3(1)--------------->AGL15 ----->At4g35610             --------->REM1(1)--------->ATERF1(1) <------NtERF2  <-----------------AGL1 ====================HOX2a_HOX2a    ===================================bZIP_DOF<-----------GT1 <----- ------At4g35610             <---------ALFIN1<---------ATERF1(1)<---------ANAC46<-----------------AGL1   gctgaactcggtgcgaggattgttatcaactacacctctaaagccgcagacgccgagcgtgtcgcgtcggagatcaatgattttccagttagggaagaaa  1032000                                                                                <------NtERF2                                                                              <---------ANAC46                                                                             --------->ATERF1(1)                                                                             <---------LBD16                                                                             <------NtERF2                                                                             <---------At4g35610                                                                             ------>NtERF2  ---------                                                                            <---------RAP2.3(1)     <                                                              <---------ATHB12<---------DEAR3(1)    <                               --------->ANAC58        ----------->GT1     <---------RAP2.3(2)     <-    ---------->DOF2            --------->ANAC46      <-----------RAV1(2)   <---------RAP2.6(2)    <-- >ANAC58                       --------->ANAC58   --------->ANAC58         <---------DEAR3(1)     <-- >ANAC58<----------ID1   <---------MYB46(3)       --------->ANAC46         <---------RRTF1(2)   ----- ----GLK1(1)    <---------ARR11(3)                --------->ANAC58        <---------LBD16<----------DOF2   tcactggaaagggaccaagagctattgtggttcaggccaatgtctctgagccaagccaggttaaatcaatgtttgatgcggcggagagtgcctttgaagc  1032100                             --------->GLK1(2)                            <---------ARR14(2)                                             <---------TOE1(3)                            <---------GLK1(2)                                             <----------   <-------TEIL             --------->ARR14(2)                                           <-------TEIL ->DOF2 --------->GLK1(2) ----------->ARR10      --------->SPL7                      <---------TOE1(2) ---------DEAR3(2)    <---------ZAT2   ---------->DOF2                            --------->YAB1 ---------MYB46(3)    --------->ZAT2<------ZmHOX2a(2) ------>ZmHOX2a(2)   --------->ARR11(3)     <--- --------DEAR3(1)     ----------->RAV1(2)      --------->TOE2(2)          <---------ARR11(3)     ---- ----NtERF2           --------->At4g35610      --------->TOE1(2) <XXXXXXXXXXXXXXXXXXXXMIR776    <---- -------LBD16         <---------At4g35610   --------->ZAT18   --------->bZIP60(2)<------ZmHOX2a(2)<-- ---->DEAR3(1)    --------->ZAT6<---------HSFB2a(2)  <------ZmHOX2a(2)   --------->HSFB2a(1)   ------   gccggttcacattctggttaactctgctgggattctcgatccaaagtaccctacgatcgcagacacatcagtcgaagatttcgatcatacgttcaggtat  1032200  Previous    Next  AGI:  At3g03980.1    Description:  short-chain dehydrogenase/reductase (SDR) family protein. similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT3G04000.1); similar to short chain dehydrogenase [Solanum tuberosum] (GB:BAE46415.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 1031749    to: 1033214    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.