Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <----------DOF2                                          --------->ARR14(2)          --------->ZAT18                           --------->ARR14(2)                     --------->KAN4(2)          <---------ZAT18                           <---------ARR14(2)            --------->LBD16 ---          <-------TEIL                              <---------ARR11(3)           --------->ANAC46<---   --------->ANAC46                                 --------->ARR11(3)        --------->ARR14(2) ---- ---------ARR14(2)                           --------->ARR14(2)      <---------ARR14(2)   <---------KAN4(1) -------->ARR14(2)      --------->AHL20(2)   <---------ARR14(2)     <---------CCA1(2)     --------->MYB46(3) ------ANAC55(2)   ------>MYB83             --------->GLK1(1)       ------>MYB83<---------LBD16<----- ----->ANAC55(2)   ------>MYB46(1)          <---------CCA1(2)       ------>MYB46(1)       --------->HSFB2a(1)   catatccacaagtgcattacctacaaataaatccgattcaaaacccatatccaatatctgttcataaaccaaatctcccatctccgcatcgaacaatccc  863000                                                                 --------->LBD16                                                                --------->ANAC46                                                          <---------HSFB2a(1)                                                          --------->HSFC1(2)                                                          <---------HSFC1(2)                                                          --------->HSFB2a(1)                                                       --------->LBD16                                                      --------->ANAC46                                                     --------->HSFB2a(2)                                                     <---------LBD16                                                  --------->GLK1(1)                                  <-----------RAV1(2)<---------HSFB2a(2)                                  <---------LBD16 <---------GLK1(1)                           <------        --------->YAB1        --------->ICU4     <---------GLK1(2)                       <---------MYB52(2)     <----------DOF2    ------->MYC3        --------->TOE2(3)   ----------->GT1          --------->MYB46(3) ------>ANAC46          <---------------AtSPL8   --------->ARR14(2)---------->DOF2  --------->ANAC46 ------LBD16            <-------MYC3 <------ZmHOX2a(1)--------->LBD16               --------->LBD16 ----->LBD16           <---------ANAC46     --------->TOE1(2)   --------->LBD16   <-----------RAV1(2) ----LBD16    ------->GAMYB ------->TEIL    --------->TOE2(2)  <---------LBD16  <----------DOF2   ---   gcgcaggctttgataaccgaaggaaacgtgtacttatcaggagaaaccttggattcccggagtttcccgtaaaactcgagggcttcagggaacaaaccat  863100                                                                                           ----------                  <---------WOX13(1)                                                     --------->ANAC58                --------->ATHB12                                                         --------->ANAC46             --------->YAB1--------->LBD16                                               --------->ANAC58             <---------At4g35610                                                      <-------TEIL      --------->DAG2      --------->HSFB2a(2)   <------NtERF2                      <------NtERF2     ---------->DOF2      <---------HSFB2a(2)  <------NtERF2                     <---------ANAC58 ---------AGL15<---------YAB1                  --------->LBD16                   <---------ANAC58 ------>TOE2(3)--------->ICU4 ----------->GT1<---------LBD16                     <---------ANAC46   <   tcttagaaaaagctctgatgattgaattccagaggtaaacatttttggccggagaaactcgtcggaaaacagagagggaagaggcgggttcacgaaagtg  863200                                                                      <---------ARR14(2)                                                                 <---------ANAC58               -----                                       <-----------HVH21         <---------ANAC46               -----                  -------->P        --------->At4g35610          ----------->GT1        <---------TOE2(3)   <---------ANAC58  --------->LBD16<---------ZAT2               <---------ANAC58       <---------TOE1(3)   <---------ANAC58<---------LBD16  --------->ZAT2      <------ZmHOX2a(2)       <---------At4g35610<- >DOF2        --------->At4g35610 <------NtERF2        <---------ARR11(3)      ------->TEIL   ------- ---------ZAT14   --------->MYB52(1)<---------At4g35610--------->ARR11(3)   --------->ANAC46  <------   agagtacttgtcgataagcttaccggagaagaagtcggagctgtcaagaccaagagagatcacaagggcgtgaattcgacgaagctcattgaggttagat  863300    ---------->DOF2               --------->ANAC58 ------>HVH21                     --------->ANAC58 ------>TGA1                 <---------bZIP60(1)                             <------------CBF ---------ID1                --------->bZIP60(1)                  <-----------GT1                  -- -->At4g35610          --------->DAG2             >>>>>>>>>>>>>>>>>LFY      --------->ATHB12       -- ---At4g35610        ---------->DOF2--------->ZAT14        *TSS  <-----------GT1                   <-   gacgacgaaagagctctagagatgaaaggtgatgacactctagtctgcatttcgccattgtagagttttacctcttcttcattgttttagtttccatcga  863400   <---------ICU4                                                                           ---------   <---------AHL20(2)                         --------->LBD16                          --------->ANAC58   -------->HAHB4                             ----------->GT1                          --------->AtLEC2  <---------YAB1                            <---------LBD16                  --------->ANAC58  <---------ATHB51                       <-----------GT1                     --------->ANAC58  --------->ICU4                       ---------->TaMYB80                    --------->ANAC46------->GAMYB ------->AHL20(2)                      <---------KAN4(2)                    --------->LBD16 --------- ------->AHL20(1)                   --------->LBD16                   <----------DOF2  --------->ANAC46 --------AHL20(2)                 <---------LBD16                  <-----------GT1     --------->ANAC58   attaattattcaaaacagaacaaaacaaatattcaaaccggaataacccggtttaaaccgagaaacttatttcttttccacgaaaaaacatgcaacgacg  863500               <----------DOF2            <---------ALFIN1         ------->GAMYB         --------->RAP2.6(2)         ----------->HVH21         --------->At1g77200         --------->ANAC46         <---------ETT(1)         --------->DREB2C(2)         --------->DEAR3(1)         --------->RAP2.3(3)                                                         --------->ARR14(2)        --------->DEAR3(2)                                                           <---------ARR14(2)        --------->RAP2.3(1)                                                       <---------ANAC58       <---------ATERF1(1)                                                        <---------ANAC58       --------->At4g35610                                                     --------->ARR14(2)       --------->ZAT2                   ------>ZmHOX2a(2)                     <---------ZAT2       <---------At4g35610            --------->ARR14(2)                      <---------At4g35610 ---------->DOF2                      <---------ARR11(3)           <---------YAB1<-------TEIL >DEAR3(1)------>NtERF2               --------->ARR11(3)   <---------At4g35610--------->At4g35610 >MYB46(3)<---------RAP2.6(3)         <---------ARR14(2)<----------DOF2     <-----------RAV1(2)    <-   attcaaagcagccgacacttttgttagacctggttatgtcgatcttgcaacgcttgagctttgctgattttcatagagccagatgcgtttcttcagaatg  863600                                                                                        <---------ANAC55(2)                                                                                   --------->YAB1                                                                                  <-------TEIL                                                                               <--------ATHB1                                                                               --------->ATHB12                                                                              <---------ATHB12                          --------->MYB46(3)        --------->AtLEC2          <---------YAB1                --------->AtLEC2            <---------YAB1                    --------->ICU4             <---------ATHB12          --------->YAB1                       --------->YAB1 --------ARR14(2) --------->YAB1      <------ZmHOX2a(2)                  ----------->RAV1(1)   gtattcggcttcgaaatcatgcataacaacaactccatggatcatcacgattccatacaaatattcgaaaaacagcaacaatgattcatcatgtaagttg  863700                                                                               <---------MYB52(1)                                                                             --------->HSFB2a(2)                                                                             <---------HSFB2a(2)                                                                            <---------LBD16                                                                          --------->ARR14(2)                                           <---------WOX13(1)             <---------ARR14(2)                                      <---------LBD16                    --------->GLK1(1)                                   <------ZmHOX2a(2)                     <---------GLK1(1)        ----------->HVH21         --------->ARR14(3)                    ----------->ARR10      --------->O2                <---------ARR11(3)                  <---------ANAC58      <---------O2<---------MYB46(3) <---------LBD16                  <---------ANAC58     ------>ZmHOX2a(1)            --------->ARR11(3)                  <---------ANAC46     =====================================HOX2a_HOX2a            <---------ANAC58    ----------->GT1  <------ZmHOX2a(2)              --------->GLK1(1)               <---------ANAC58<---------MYB46(3) --------->ARR14(2)              <---------GLK1(1)            <---------MYB52(1)<--------P <---------ARR14(2)  <-----------GT1------>ZmHOX2a(2)       <---------MYB46(3)--------->LBD16   <----   ttcgatcctcgtgacaatagttgttacacattaagagatctcgggattgatatggctacgagtcgttgtttggcgagttccggtagatggtttcttctgt  863800                     <----------DOF2             --------->HSFB2a(1)            <---------GLK1(2)                    --------->HSFC1(2)            --------->ARR11(3)                   <---------HSFC1(2)                          --------            <---------ARR11(3)                 --------->ARR14(2)                           <--------          ----------->ARR10                    <---------GLK1(2)             <---------GLK1(1)        --------->TOE2(3)  ------->TEIL        <---------ARR14(2)            --------->GLK1(1)  --------->AtMYB61 <---------DAG2            <------ZmHOX2a(1)    --------->WOX13(1)    --------->ICU4 -----MYB52(1)   <-----------GT1 --------->ZAT14 <---------HSFB2a(1) <---------ATHB12  ------->TEIL -   tagaccataacctagattttcaccttttgaatctgtttactagagagaggattcttccgactcttgaatcaatcgatggatttccgatggacttatgaga  863900  Previous    Next  AGI:  At3g03580.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G18750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17828.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83351.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 860519    to: 863359    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.