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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
--------->
O2
----------->
HVH21
=============================
bZIP_DOF
--------->
ANAC46
--------->
ARR14(2)
=======================
MYC_MYB
<---------
ARR14(2)
<--------
P
--------->
ANAC58
<---------
ANAC58
--
<---------
ANAC55(2)
--------->
TGA1a
<----------
DOF2
<---------
RAP2.6(3)
<-----------
GT1
--------->
ANAC55(2)
--------->
bZIP60(2)
<---------
ANAC58
<-----
ttgtaacgtttgattttctagctattacatattcaacttggtagataatagacacgacacgagtaagccaactttcttgatcaagccgatttgtttttta
555200
------>
MYB46(1)
------>
MYB83
<---------
MYB52(1)
<---------
MYB59
<------
ZmHOX2a(2)
<---------
ANAC58
------->
TEIL
------>
ZmHOX2a(2)
<---------
ANAC58
--------->
ANAC55(2)
--------->
ANAC58
<---------
ANAC55(2)
------>
MYB46(1)
--------->
ANAC46
<---------------
AtSPL8
<---------
MYB59
--------->
ANAC58
--------------->
AtSPL8
<---------
TOE2(3)
------>
MYB83
------->
MYB52(1)
<----------
DOF2
<---------
ARR14(2)
--------->
TOE1(3)
------
GT1
<---------
MYB46(2)
--------->
ARR14(2)
--------->
TOE2(3)
--------
caaacggcatgcgttaccaaactttattatgtaccaaaaacgatccgttaagaatataaaaacctaaacataccatccttgtgatgttttgtttattgta
555300
--------->
YAB1
<---------
AHL20(2)
<----------
DOF2
--------->
AHL20(2)
--------->
ARR11(3)
------->
TEIL
<-----------
GT1
------>
ZmHOX2a(2)
-
------>
MYB46(1)
<-------
TEIL
<---------
YAB1
<---------
ARR11(3)
--------->
ANAC58
------>
MYB83
--------------->
AtSPL8
<---------
YAB1
--------->
ANAC58
--->
GT1
<---------------
AtSPL8
<---------
AHL20(2)
--------->
ANAC46
aaaccaaacaaatgtgttttcatgtgaattatgtacatttaaaattataacaaaatttatgatcttttgtatgtataacatgaaatatttgaacgccaat
555400
<---------
AHL20(2)
--------->
AHL20(1)
<----------
DOF2
--------->
AHL20(2)
------>
ZmHOX2a(2)
<---------
AHL20(1)
<------
ZmHOX2a(2)
<---------
AHL20(2)
<---------
ARR11(3)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AGP1
<---------
AHL20(2)
<---------
AHL20(2)
--------->
ARR11(3)
--------->
AHL20(2)
--------->
YAB1
<---------
ANAC55(1)
-------->
P
<---------
YAB1
----------->
GT1
<---------
ANAC55(2)
--------->
MYB52(1)
--------->
ANAC58
<---------
ANAC46
<---------
MYB111(1)
---
--------->
ANAC58
<---------
TOE2(3)
<---------
ANAC58
<---------
MYB52(2)
<--
---------->
DOF2
<-------
GAMYB
<---------
ANAC58
--------->
MYB46(3)
----
--------->
ANAC58
<---------
ANAC46
<---------
YAB1
--------->
MYB52(1)
---------
--------->
ANAC58
<---------
ANAC58
<---------
ARR14(2)
--------->
ZAT6
--------->
AHL20(2)
-------->
MYB52(1)
<---------
ANAC58
<----------
DOF2
--------->
AGP1
<---------
MYB46(2)
---------
gcaaacggaaagaaattatattatttgcgttgagatttatgtctttgcgattacgtttaatagatctttaagactaactaacccaaattaatataagtaa
555500
--------->
STY1(2)
<---------
STY1(2)
--------->
YAB1
<----------
ARF1
--------->
YAB1
--------->
AHL20(2)
----------->
HVH21
<-----------
HVH21
<---------
AHL20(1)
<---------
ANAC58
--------->
ANAC58
--------->
bZIP60(2)
--------->
YAB1
<---------
YAB1
<---------
ANAC58
--------->
ANAC46
<------
ZmHOX2a(1)
<---------
YAB1
<---------
AHL20(2)
----------->
GT1
--------->
ANAC58
------>
YAB1
--------->
YAB1
--------->
AHL20(1)
<---------
DEAR3(1)
-------
ICU4
<-----------
GT1
--------->
YAB1
<---------
At4g35610
--------->
ZAT6
------->
GAMYB
----->
ICU4
<---------
AHL20(2)
<---------
YAB1
<---------
ZAT2
--------->
ICU4
<----------
DOF2
>
ANAC46
--------->
AHL20(1)
--------->
ICU4
--------->
At4g35610
<-----------
GT1
--------->
At4g35610
>
ANAC55(2)
<---------
AHL20(1)
--------->
YAB1
--------->
ZAT2
<---------
bZIP60(2)
<---------
At4g35610
taaggactcgtcatatatatttatcatataagaataataataaattataagagctggctagggggtgacatgtttaacactccatcttttgtcaactcac
555600
<---------
AHL20(2)
--------->
AHL20(2)
------>
ZmHOX2a(1)
--------->
CCA1(2)
-
------>
ZmHOX2a(1)
*
TSS
<---------
ARR11(3)
<
<-----------
GT1
------>
ZmHOX2a(1)
---------->
DOF2
--------->
ARR11(3)
---
tatatactcctctctcctcctaacacagaggc
acaagggcaagaagaaaagagagagatagagatatataa
atgaagatggctcttctcttgaactcgac
555700
<-----------
GT1
<------
NtERF2
=======================
HOX2a_HOX2a
<---------
LBD16
------>
ZmHOX2a(2)
<------
NtERF2
------>
NtERF2
====================
HOX2a_HOX2a
<---------
At4g35610
--------->
LBD16
========================
HOX2a_HOX2a
--------->
At4g35610
--------->
At5g28300
<---------
ANAC46
<---------
ALFIN1
---------->
DOF2
<---------
MYB46(3)
--------->
At4g35610
=====================
HOX2a_HOX2a
<------
NtERF2
<---------
MYB52(1)
<---------
LBD16
--------->
ARR11(3)
------>
NtERF2
--------->
ARR14(2)
<---------
At4g35610
<------
ZmHOX2a(2)
<---------
MYB46(3)
<---------
At4g35610
--------->
LBD16
--------->
ARR14(2)
<---------
DEAR3(1)
--------->
At4g35610
<---------
ANAC46
<---------
ARR14(2)
------>
ZmHOX2a(1)
<--
-------->
MYB52(1)
<---------
ARR14(2)
<---------
LBD16
<------------------------
ANAC81
<--
---------
DOF5.7(2)
--------->
GLK1(2)
<----------
DOF2
<---------
ANAC58
------>
ZmHOX2a(1)
<--
------>
DOF5.7(2)
<---------
GLK1(2)
<---------
ARR11(3)
<---------
ANAC58
<-----------
GT1
<--
gataacggtggctatgaagcagaatccgctggtcgcggtatcttttccgcggactacttgcttgggatctagtttttctcctcctcgtcttcttcgagtt
555800
------>
ZmHOX2a(2)
--------->
AtMYB61
<------
ZmHOX2a(2)
<---------
ALFIN1
--------->
ARR11(3)
<---------
MYB52(2)
--------->
ARR14(2)
<-------
GAMYB
<---------
ARR14(2)
---------->
ID1
<-----------
RAV1(1)
<---------
ARR11(3)
<-----------
GT1
--------->
ALFIN1
<---------
AGP1
<----------
DOF2
--------->
MYB52(2)
<----------
DOF2
---------->
ID1
-------
ANAC55(1)
<-----------
GT1
<-----------
GT1
<----------
DOF2
-------
ANAC58
<-----------
GT1
<---------
ANAC58
<----------------------
-------
ANAC46
<---------
STY1(1)
--------->
AGP1
--------->
TOE2(3)
---------->
ID1
<
-------
ANAC58
--------->
STY1(1)
<---------
CCA1(2)
<---------
ANAC58
<----------
DOF2
---
tcgtgtgttgccacaaaccctag
gtgagttttatctttttagatcttcaattcgtttccttgatcaagttttttctttttcttttttctttttttcattt
555900
<-----------
GT1
------>
MYB83
<---------
AHL20(2)
------>
ZmHOX2a(1)
----------->
GT1
<---------
YAB1
--------->
ARR14(2)
-------
<-----------
GT1
----------->
GT1
<---------
ARR14(2)
--------
--
ANAC81
<---------
MYB46(3)
--------->
GLK1(1)
<-------
----------
DOF2
--------->
ATHB12
<---------
WOX13(1)
------>
MYB46(1)
------->
ID1
<-------
GAMYB
<-----------
GT1
--------->
AHL20(2)
<---------
GLK1(1)
--------->
MYB52(1)
ggctttatactggttaatttcgttgtatatgtttaactcattggttatatttaactatttgtctaattggcaaatcctttcaaaaccaaatcgaaacggt
556000
<---------------
AGL15
<---------
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
DAG2
--------------->
AGL15
--------->
ZAT18
--------->
MYB52(1)
--------->
AHL20(2)
---------->
DOF2
---->
GT1
---------->
DOF2
<-----------
GT1
--------->
ANAC58
<-------
------->
AtSPL3
--------->
ICU4
--------->
ANAC58
----------->
RAV1(1)
--------
--------
AtSPL8
----------->
GT1
----------->
GT1
<---------
ZAT6
---------
acaaaactgatcaaaaagttagtaatttttttccatatagaaaaatggcactgaatagtgaaagtgaacaacattgaacttagaaatacttcaaattaat
556100
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AGI:
At3g02610.1
Description:
acyl-[acyl-carrier-protein] desaturase. similar to acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative [Arabidopsis thaliana] (TAIR:AT3G02620.1); similar to acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative [Arabidopsis thaliana] (TAIR:AT5G16230.1); similar to stearoyl-acyl carrier protein desaturase [Linum usitatissimum] (GB:CAA07349.1); contains InterPro domain Ribonucleotide reductase-related; (InterPro:IPR012348); contains InterPro domain Fatty acid desaturase, type 2; (InterPro:IPR005067); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR0090
Range:
from: 555633
to: 557588
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.