Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <-------TEIL                                                            <------MYB83                                                            <------MYB46(1)                      ----                                                           --------->MYB59                       <---                                                 <---------------AGL15     ----------->GT1       ----                                                --------->TOE2(3)       <---------TOE2(3)        ----                                        ---------->DOF2    --------->MYB46(2)                   -----                                   --------------->AGL15   --------->MYB111(1)                  <----                           ----------->GT1      --------->TOE1(3)       <---------TOE1(3)--------->At4g35610                 <---------ANAC46  ==============================MADS_MADS<------ZmHOX2a(1)     -----                 ----------->GT1  --------->TOE2(3)        <---------------AtSPL8        <---------At4g35610 -ATHB12         <---------MYB46(3)<---------------AGL15  <--------P--------->YAB1--------->ATHB12   tgacataaaaacaccagggtcgtttaaactagtaaaacttaataaaggaaccttaatagagtaggtacaatgttaaggagtaaatgagtgaagctcaaga  19669300                                                                      --------->ATHB12                                                                      <---------ICU4                                                                   <---------ICU4                                                                   --------->YAB1                                                                  --------->ICU4                                                                --------->YAB1                                                                <---------ICU4                                                         <---------AHL20(2)                                                      <---------ARR11(3)          ---------->DOF2                             --------->ARR11(3) ----->GLK1(1)                <---------WOX13(1)     <------ZmHOX2a(1)--------->ATHB51 ------GLK1(1)              --------->ATHB12       <---------TOE2(3) <---------YAB1 ----->CCA1(2)             <---------YAB1 --------->ANAC58     <---------YAB1--------->ANAC58       - ----->RVE1(1)            <---------MYB52(1) ---------->DOF2<---------YAB1   --------->ANAC46      <- ---->ARR11(3)           <-------GAMYB    --------->ANAC58  <---------AHL20(2)              --------- -----ARR11(3)     <------ZmHOX2a(1)  <------ZmHOX2a(1)<---------RVE1(1)     --------->ANAC58      -- ---->ARR14(2)  <------ZmHOX2a(1)    --------->ZAT18--------->ICU4<---------YAB1       --------->CCA1(2)   tatcccatgagacaaagaggaggactctgttgattgaagaggactagcaaagtaaggatttttttattattattattgcaagcaagaagatagagaaaga  19669400        --------->HSFB2a(2)      ------>MYB46(1)      ------>MYB83   --------->ZAT2   ----------->RAV1(2)                          <<<<<<<<<<<<<<<<<LFY  -------->P                        ----------->RAV1(1)  ------>MYB46(1)                 --------->ZAT18  ------>MYB83          ----------->RAV1(1)     >>>>>>>>>>>>>>>>>LFY             <---------ARR14(2) -------->AtMYB61      <----------ID1          --------->ANAC46                  --------->ARR14(2) --------MYB52(2)    --------->ANAC58          --------->ANAC58           <------ZmHOX2a(2) ->DOF2 <---------HSFB2a(2)  ---------->DOF2   --------->ANAC58         ------->GAMYB      <---------YAB1 ------->MYB46(3)    --------->ANAC58 --------->AtMYB61          ---------->ID1 <---------CCA1(2)   aaccaacctgccagaagaagcgaaggcaacaagaagcccaccaaaaaactcgccattggaaacttttgtcttaacgatcaccatatcccaattctcatcg  19669500                        ------>NtERF2                       <---------ETT(1)                       --------->DEAR3(1)                       ----------->HVH21                         --------->LBD16                   <---------ZAT2                 --------->ANAC58                   --------->ZAT2                 --------->ANAC58            <---------ALFIN1                    --------->MYB52(1)<------NtERF2          XXXXXXXXXXXXXXXXXXXXX>MIR853     --------->DAG2      <------NtERF2         ------>ZmHOX2a(2)                ---------->DOF2     <------NtERF2        <------ZmHOX2a(2)                ---------->DOF2      <---------ATERF1(1)       --------->ARR14(2)              <---------HSFB2a(2)    ------>NtERF2      ----------->GT1       <---------ARR11(3)              --------->HSFB2a(2)   --------->ANAC46    <------ZmHOX2a(1)       <---------ARR14(2)        <---------ARR11(3)------->GAMYB--------->DEAR3(1)     <---------ICU4       --------->ARR11(3)  --------->TOE2(3)   <---------WRKY12<---------LBD16  ----------->GT1   aattcaatagatcccctctctagctccgacctcaatttcttccaaaaggccaacgaaatcagcccgccggagactaaaacggaggataaaaatttccaat  19669600                                <---------MYB46(3)                              <---------At4g35610                              --------->At4g35610                         --------->DAG2                        --------->DAG2                       ---------->DOF2                     --------->LBD16                    --------->LBD16                    --------->ANAC46                   <---------HSFB2a(2)                   --------->HSFB2a(2)                   --------------->AGL15                   <---------------AGL15                  ----------------->AGL1   --------->ALFIN1           --------->STY1(2)  <---------ZAT2                                                       <-           <---------STY1(2)<--------P     <---------ANAC46          <---------ARR14(2)            --  --------->ANAC58<-----------------AGL1   <---------ANAC58   <---------ANAC58              ---------  --------->ANAC58<-----------------AG     <---------ANAC58   <---------ANAC58         *TSS <--------   tctcacgaattctagcaagttcccgaaaaggtagctgttgaagatgtgtgtgaatttgaaggtggattgcaaatttgagagaattggaaactggaaatcc  19669700                                         <---------ATHB12                                     ------------>CBF                                    --------->ANAC58                                    --------->ANAC46           <---------YAB1                                    --------->ANAC58          <---------AHL20(2)                           <----------DOF2           <---------YAB1       --------->LBD16                          ------>ZmHOX2a(2)         <---------AHL20(2)    ------>NtERF2                         <------ZmHOX2a(2)          --------->AHL20(2)   --------->DEAR3(1)                         <---------RVE1(1)      <---------ICU4--------->AHL20(1)                   <-                        --------->ARR14(2)     <---------YAB1 <---------AHL20(1)                 ----                        <---------ARR11(3)   <---------ICU4  --------->AHL20(2)                  ----      --------->ANAC58  <-----------ARR10--------->ICU4  --------->AHL20(1)                      <---      --------->ANAC46  --------->ARR14(3)   --------->YAB1  <---------AHL20(2)              --------      --------->ANAC58  --------->ARR11(3)  --------->ICU4   --------->YAB1                 <-------- --------ARR14(2)       <---------ARR14(2)--------->YAB1 <---------AHL20(1)                ------>MYB46(1) ------->ARR14(2)       <---------ARR14(3)<---------ICU4 --------->AHL20(2)                ------>MYB83 >GLK1(1)           ---------->DOF2<---------HSFB2a(2)   <---------AHL20(2)      ----------->GT1 ==== -GLK1(1)       ---------->DOF2    --------->HSFB2a(2)--------->YAB1    <------NtERF2     --------->WOX13(1)   aaatccacaagcaaaaatcaaagaaagatcttttcttctcgcaataatcatcattttaataaattatatttagcgccgagaaatggctaaaccaatcaaa  19669800                             <---------ANAC58                          <---------WOX13(1)                         <---------ANAC58                         <---------ANAC58      <---------PCF2 <------------CBF     <---------DEAR3(2)  <------------CBF    <---------ZAT18 --------->ATHB51    <---------DEAR3(1)  --------->ATHB12 <---------ANAC46   -------->ATHB1 <---------TGA1a    <--------ATHB1 ============================================bZIP_DOF --------->O2       --------->ATHB12 <---------O2       <---------ICU4                         <-------GAMYB --------->TGA1a   <---------ATHB51  <---------AHL20(2)   <------MYB83 ----------HVH21   --------->ICU4<---------ANAC58         <------MYB46(1) ----->MYB46(3) ------------>ATHB5<----------DOF2     --------->GLK1(1) ----->DEAR3(2)<-------TEIL  <---------ANAC58         <---------GLK1(1) ---------AtMYB77  <---------ATHB12  --------->AHL20(2)  --------->MYB59         <---------ATHB12 ->YAB1        ------------>CBF  <---------ANAC58  --------->LBD16           ------------>CBF -ATHB12      --------->GLK1(2)------>NtERF2    --------->MYB52(1)        ----------->GT1 ==========MYC_MYB <---------YAB1<---------ANAC46<---------LBD16  <------------CBF---------->DOF2  <<   ccgtcgtgggctcgagattcaattattgattgctggcttttaatttggaataccggagttcggttgagaattggaccggttcaataaagccaacaagttt  19669900                                                   --------->ANAC58                                                 <---------ALFIN1               --------->ATHB12                 <---------At4g35610              *TSS                              --------->At4g35610              <---------YAB1                 --------->At4g35610              <---------ATHB51               <---------ZAT14--------->ATERF1(1)     ------>ZmHOX2a(1)                       <---------At4g35610    --------->TOE2(3)               <------MYB46(1)--------->ANAC58                      <----------DOF2    <---------ANAC58                <------MYB83--------->ZAT2   ------>ZmHOX2a(1)      <---------ANAC58    <---------ANAC58   <------ZmHOX2a(1)     --------->ZAT14<---------GLK1(1)           <---------ANAC58 <<<<<<<TBF1  --------->ICU4       <---------AtMYB61        --------->GLK1(1)      <---------ICU4   cttcttccttatcgcgattattggaggagagaatgagttggtctctctgcagcacccatggggtctcctcttccatagctctcacttatggctttcgcca  19670000                                                                   <---------HSFB2a(1)                                                                   --------->HSFB2a(1)                                                                  --------->ARR14(2)                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)                   <-----------ARR10                             <---------GLK1(2)                   --------->ARR14(2)                           <------NtERF2                   <---------ARR14(2)                          --------->LBD16                 --------->LBD16                              --------->RAP2.6(2)                <---------ANAC58                              --------->LBD16                --------->ANAC55(2)                           --------->RAP2.3(2)                <---------ANAC46                             <------NtERF2                <---------ANAC55(2)                          <---------LBD16                <---------ANAC58                            --------->LBD16                <---------ANAC55(1)                         ------>NtERF2              ------>MYB83                                 --------->ANAC46              ------>MYB46(1)                              --------->DEAR3(1)            --------->AtMYB61                             <---------MYB55(2)            <---------DAG2                                --------->DEAR3(2)         <---------ALFIN1           <---------ANAC46      --------->MYB46(3)       --------->CCA1(2)         ----------->HVH21      --------->ARR14(2)       <------ZmHOX2a(2)     --------->O2               <---------ARR14(2)      --------->ARR11(3)    ------>NtERF2           <------ZmHOX2a(1)   ------>ZmHOX2a(1)      <---------ARR11(3)   --------->DEAR3(1)   XXXXXXXXXXXXXXXXXXXX>MIR169H-N             --------->ZAT14      <---------ARR14(2)   xxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->MYB52(1)             --------->At4g35610      --------->AGP1       <---------ALFIN1     XXXXXXXXXXXXXXXXXXXX>MIR169B/C             <---------At4g35610      --------->ARR14(2)--------->ANAC46       XXXXXXXXXXXXXXXXXXXX>MIR169A             ------>ZmHOX2a(1)    ----------->ARR10 <-----------GT1          XXXXXXXXXXXXXXXXXXXX>MIR169D-G     ------>ZmHOX2a(1) -   tagaagaagatccaccttccgtattttcgccacctctgacggattagaacccaaggacgacccgccggaatctcctctcccttcctcatcctctgctctc  19670100                      <----------DOF2                     <---------DAG2                     <----------DOF2                   <------NtERF2                   ------>NtERF2        <---------YAB1                 <-------TEIL   <<<<<<<<<<GT-1               --------->ARR14(2)      <---------TOE2(3)                             ------->TEIL            --------->DAG2      <---------ARR11(3)                           --------->YAB1       <--           ---------->DOF2<-----------GT1         <-------GAMYB       --------->AtLEC2          <---- --------->DOF2<---------ARR14(2)     <-----------GT1          <------ZmHOX2a(1)   --------->ZAT18<--   ggtaaagacttgaaaaaggtccgccttttttctatatcatttacgatttttctgttgaaaccataggaagacatgaaaatgaaaatgcaccatgttagat  19670200  Previous    Next  AGI:  At2g48060.1    Description:  oxidoreductase. similar to unnamed protein product [Vitis vinifera] (GB:CAO68575.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22459.1); contains InterPro domain Cytochrome b/b6, C-terminal; (InterPro:IPR005798) Range:  from: 19665165    to: 19669687    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g48070.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO22460.1) Range:  from: 19669914    to: 19671112    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.