AthaMap

Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved TF binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
<-------TEIL <---------ANAC58 <---------ANAC58 <---------ANAC46 --------->ATERF1(1) <------NtERF2 <---------RAP2.3(1) <---------DEAR4(2) <---------ATERF1(1) <---------RRTF1(1) <---------ORA47(2) <---------ERF1 ------>NtERF2 <---------RAP2.3(3) <---------DEAR3(1) <---------ANAC46 --------->DEAR3(1) ------>NtERF2 <---------ABI4(1) <------NtERF2 <---------RRTF1(1) <---------RRTF1(2) <---------DEAR3(1) <---------ANAC58 <---------RAP2.3(1) <---------ANAC46 <---------DEAR4(2) <---------TGA1a <---------RAP2.3(2) <---------ANAC58 <---------ATERF1(1) <---------HSFB2a(2) <---------RAP2.6(2) - --------->HSFB2a(2) <-------TEIL - ====================bZIP_DOF <---------RAP2.3(2) <---- <---------MYB52(1) <---------LBD16 <---- <-------GAMYB <---------O2 --------->ALFIN1 ------ =========================MYC_MYB --------->ATERF1(1) <------ <---------ARR14(2) <----------DOF2 --------->GLK1(1) <------ --------->ARR14(2) <---------ANAC58 --------->At4g35610 <------- <-----------------AGL1 <---------ANAC58 <---------GLK1(1) <---------ANAC58 <-------- ------>ZmHOX2a(1) <-----------RAV1(1) <------ZmHOX2a(1) <---------ANAC58 <---------RAP2.3(3)
ctctcctaggcctggatttggcaaacctctgttgctttctagagtcgtgagtaggagatgcggcggcgttcatgggcttgagaatgctcttggggcggtc	19656800
<---------PCF2 <------NtERF2 --------->ATERF1(1) <---------ATERF1(1) <---------MYB46(3) ------>NtERF2 <---------ANAC46 <------NtERF2 <---------LBD16 ------>GAMYB <---------RAP2.3(1) -------->TOE2(3) <---------DEAR4(2) -----WRKY38(1) <---------DEAR3(1) --------->ZAT18 -----WRKY12 <---------RAP2.6(2) <------NtERF2 --->WRKY18(1) ----------->HVH21 --------->ALFIN1 --ZAP1 --------->ANAC58 <---------RAP2.3(2) <---------DOF5.7(2) -----HVH21 --------->ANAC58 --------->SPL7 ---------->DOF2 - --MYB46(3) --------->ARR14(2)<---------ANAC58 --------->DOF5.7(2) <-- -DEAR3(1) <---------LBD16 <---------ANAC58 --------->AtLEC2 --------->TOE2(3) <---------AtMYB61
aaccgtagacttggaccggaatggcaagcccttgttgctagggacggcgggagccatggagaacatagcagcgttaaaggtggccactgtgatggttttg	19656900
------>NtERF2 <---------At4g35610 <---------ZAT2 --------->ZAT2 <---------At4g35610 --------->At4g35610 <------NtERF2 <-------GAMYB --------->ATERF1(1) <---------ATERF1(1) <---------RAP2.3(1) <---------ERF1 <---------ATERF1(1) <---------RRTF1(1) <---------MYB46(3) ------>NtERF2 <---------ANAC58 <---------RAP2.3(3) <---- <---------RRTF1(2) ----- <---------DEAR3(1) ------ --------->ATERF1(2) <---------ANAC46 <---------ATERF1(2) <---------LBD16 <---------ANAC58 --------->MYB52(1) <---------RAP2.6(2) <---------WRKY18(1) <---------ANAC46 <---------WOX13(1) <---------RAP2.3(2) --------->MYB55(2) <---------DREB2C(2) <---------MYB46(3) <---------RRTF1(3) <---------AtMYB61 <---------ATERF1(1) <---------MYB46(3) --------->MYB55(2) --------->ALFIN1 <--- <---------MYB46(3) --------->ICU4 <---------AtMYB61 --------->ALFIN1 --------->YAB1 <---------DEAR3(1) <---------ANAC46 --------->ICU4 --------->At4g35610 --------->WRKY12 <---------ANAC58 <---------YAB1 <------ZmHOX2a(1) <---------MYB46(3)---- <---------ANAC58 --------->ANAC58 --------->LBD16 <---------DEAR3(1)<---- <---------MYB46(3) ---------->DOF2 <---------YAB1 <---------At4g35610 ----------->HVH21 --------->ALFIN1 --------->ATERF1(1) <---------YAB1 <---------LBD16 --------->ALFIN1 ------- -------->LBD16 --------->RAP2.6(3) --------->ICU4 <-----------RAV1(2) <---------AtMYB61 ------ -------LBD16 <---------DEAR3(1)--------->ANAC58 <---------YAB1 --------->MYB52(1)<-------GAMYB
tccgggtttgggtggatggcggctgccgatgaaaagccattttgatgatgatgagtctcaggagaagaatcaactgagaggtggtggtggttgacggaga	19657000
<---------ANAC46 --------->ATERF1(1) <------NtERF2 ------>NtERF2 <---------ATERF1(1) <---------DEAR3(1) <---------RAP2.3(2) <---------ARR14(2) <---------ATERF1(1) --------->LBD16 <---------ANAC46 <---------DEAR3(1) <------NtERF2 <---------DEAR3(1) --------->ATERF1(1) <---------LBD16 <---------ATERF1(1) --------->SPL7 <---------RAP2.3(1) <---------ABI4(1) ------>NtERF2 <---------RRTF1(3) --------->LBD16 <---------RAP2.3(3) <---------LBD16 --------->ATERF1(1) <---------ANAC46 <---------ATERF1(1) <---------LBD16 ----------->HVH21 <---------LBD16 --------->ATERF1(1) <----------DOF2 --------->ARR14(2) <---------GLK1(1)<---------ATERF1(1) <---------ANAC58 --------->ATERF1(1) <---------ANAC58 <------NtERF2 -----ARR14(2) <---------RAP2.3(1) <-------TEIL ---->ARR14(2)<---------RAP2.3(2) <---------ATHB12 <------------- --->GLK1(1)<---------ATERF1(1)<------NtERF2 <---------TOE2(3) ------>ZmHOX2a(2) ------ARR14(2)<---------ORA47(2) --------->ANAC58 --------->DAG2 --------->ICU4 ------- ----->GLK1(2)<---------RAP2.6(2) --------->ANAC58 ---------->DOF2 --------->AHL20(2) --- -----GLK1(2)--------->ATERF1(1) ---------->DOF2 ----------------->AGL3 ============== ---->ARR10 ----------->HVH21 <---------LBD16 <---------------AtSPL8 <------ZmHOX2a(2) --------->ZAT6 --->HSFB2a(1)<---------DEAR3(1) <------ZmHOX2a(1) =============================================
ttctggctttccggggacggcggagacgacggcggaggaaagcaatgaggttcaacatactaaaaaaagggcgatcgcatttattaagtctaaaactagt	19657100
<----------DOF2 --------------->AGL15 --AGL15 --------->GLK1(1) ---->GT1 <----------DOF2 <---------GLK1(1) <- ------->DOF2 --------->ARR11(3) --------->CCA1(2) -- ==================================================================MADS_MADS <------ ==MADS_MADS <---------At4g35610 --------->ANAC46 --------->ALFIN1
aaaagtatatacttttgagttttgacaatgagagagagagatgatatagatttccttttatacgaagaaatgagagagagagagttgtggaatgtggagt	19657200
--------->ICU4 <---------ANAC46 --------->TGA1a <---------ANAC58 <---------ANAC55(1) - <---------ANAC58 < <---------ANAC55(2) ----- <---------O2 <---- --------->O2 ------ <-----------HVH21 <---------bZIP60(2) ------ ---------->DOF2 <---------TGA1a <------- --------->ZAT18 <----------DOF2 --------->ANAC55(2) ------->TEIL <---------ZAT18 <---------At4g35610 <---------SPL7 -------------- --------At4g35610 --------->At4g35610 <---------ANAC58 -------------- ------->At4g35610 *TSS ====================================bZIP_DOF <------------- ---ANAC46 ----------->GT1 <---------ANAC58 <---------YAB1 <---------AHL20(2)
ttgctgcacaaaaaagaaggtcatatgagcttcttgggaaaatggtatttggcttacgtggcattatcaactcatcatcgatgttaataaatgtaccaaa	19657300
<------MYB83 <--------HAHB4 <----------DOF2 --------->ATHB12 ----->ZmHOX2a(1) <---------YAB1 <---------ICU4 ----------DOF2 <---------AHL20(2) --------->YAB1 ---->ARR14(2) <---------YAB1 <---------ATHB12 -----ARR14(2) <---------YAB1 ------>MYB83 <-- >MYB83 --------->AHL20(1) ------>MYB46(1) --- >MYB46(1) --------->ICU4 <---------YAB1 --------->WOX13(1) <--- --MYB59 <---------YAB1 <-----------GT1 --------->AtMYB61 ---------------- ->AtSPL3 <---------ANAC58 <---------AHL20(2) --------->MYB46(3) <---------AHL20(2) ---- ->AtSPL8 <---------ANAC58 <---------AHL20(1) --------->ZAT18 <----------DOF2 ------ --AtSPL8 <---------ANAC46 --------->AHL20(2) ---------->DOF2 <------MYB46(1) <-----------GT1
tccttttcttttttgtgtgtcttaattgtattttattactattattttagaaaagcccaccaatcatttggtttcagtcttttattttccaatacagaaa	19657400
--------->DOF5.7(2) ----------->GT1 <---------YAB1 <--------HAHB4 --------->ATHB51 --------->ARR11(3) --------->YAB1 -------ICU4 >>>>>>>>>GT-1 -------->ATHB1 ------>YAB1 ----------->GT1 <---------ICU4 ------ATHB12 <---------TOE1(3) <---------ATHB51 ->AGL1 --------->MYB59 --------->ICU4 ----->ICU4 <---------TOE2(3)---------->DOF2 ------->TEIL --->GLK1(1) <XXXXXXXXXXXXXXXXXXXX MIR415 <---------HSFB2a(2)<---------YAB1
tcatgaaatacagtatggtattctgtttttgttttgtttaggtaaatctcgaactaaaagtatacaattattatggacgttaaacaactacgaaggaata	19657500
<---------TOE2(3) --------->MYB52(1) --------->YAB1 <--------HAHB4 ---------->DOF2 --------->AHL20(2) <---------AHL20(2) <---------------AGL15 ---- <---------ARR14(2) --------------->AGL15 ------ --------->KAN4(2) --------->MYB46(3) --------->ARR11(3) <-----------TGA1 --------->ARR14(2) ----------->GT1 ----------------->AGL2 <----- <-----------HVH21 <----------TaMYB80 --------->DAG2 ----------------->AGL3 <------- --------->MYB46(3) <---------KAN4(2) ---------->DOF2 ------->GAMYB <---------ARR11(3) ------->TEIL ---------->DOF2 <---------YAB1 <-----------GT1 --------->DAG2 <---------AHL20(2)
ggtttatgaaccatcgtcagagaagagaaagggagcatattctataattaacgaaaaggaaattaacaactcccaaaaaaagttatagagattttatttt	19657600
<---------PCF2 <-----------HVH21 <---------TOE2(3) <------MYB83 ----->AHL20(2) <---------AHL20(2) --->AHL20(2) --------->AHL20(2) ----------->HVH21 ------ ----AHL20(2) ----------->GT1 <------MYB46(1) ------>ZmHOX2a(1) -------- --YAB1 <---------AtLEC2 <---------MYB46(3) ------->TEIL --------
tatatataggtttaatgcatggtatatatatagctagtgggtcaggcctatttgacatggacctcctcattaaaactaattagactatcaatttcaagca	19657700

AGI:	At2g48030.1
Description:	endonuclease/exonuclease/phosphatase family protein. similar to endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] (TAIR:AT3G21530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71059.1); contains InterPro domain Endonuclease/exonuclease/phosphatase (InterPro:IPR005135)
Range:	from: 19654593	to: 19657218	Orientation: Reverse
Links:	TAIR MIPS

Please cite the corresponding publications when using AthaMap.