Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
MYB46(3)
--------->
MYB52(1)
--------->
ZAT6
<---------
MYB52(2)
<---------
AHL20(2)
--------->
RAV1(1)
<---------
At4g35610
--------->
AHL20(2)
-------
WRKY38(1)
--------->
At4g35610
--------------->
AGL15
-->
DAG2
<----------
DOF2
--------->
ZAT14
<----------
DOF2
--------->
ICU4
-->
DOF2
------->
GAMYB
---------->
DOF2
--------->
ARR14(2)
--------->
DAG2
<---------
ICU4
<------
ZmHOX2a(1)
---
AGL15
----------->
GT1
--------->
AtMYB61
---------->
DOF2
<--------
HAHB4
<-------
tcaacagtaacgaccaagactgaaaaaaagctttgtgaaaccaaaactgcagcaaacccataaaaaaagtttactttcgataattagcatttattaggac
19267600
<--------
HAHB4
<---------
ICU4
<------
ZmHOX2a(2)
--------->
ATHB12
--------->
CCA1(2)
<---------
ATHB12
--------->
AGP1
--------->
WOX13(1)
--------->
ARR14(2)
--------->
bZIP60(2)
--------->
YAB1
<---------
ARR11(3)
--------->
ANAC46
<---------
YAB1
--------->
ARR11(3)
--------->
ANAC58
--------->
ICU4
<---------
TOE2(3)
--------->
ANAC58
<---------
ANAC55(2)
<---------
TOE1(3)
<---------
GLK1(1)
--------->
ANAC55(2)
<---------
YAB1
<---------
ARR14(2)
--------->
GLK1(1)
<---------------
AtSPL8
---------->
DOF2
<---------
ARR11(3)
-----
<---------
MYB46(3)
<-----------
GT1
<---------
AHL20(2)
---------->
DOF2
--------->
ZAT18
---
ID1
--------------->
AtSPL8
--------->
AHL20(2)
---------->
DOF2
--------->
ARR11(3)
---------
gagattgttgattaagtacttattaatcatttgattatttaaagtttcaagatccaaattcaaagaaaaaacaaaagatttctccctaagcccacgacat
19267700
--------->
YAB1
--------->
WOX13(1)
--------->
YAB1
------->
GAMYB
<---------
MYB55(2)
<---------
ATHB12
<---------
YAB1
--------->
MYB46(3)
<-----------
GT1
<---------
AHL20(2)
------>
MYB83
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ARR14(2)
<---------
AHL20(2)
<---------
YAB1
<---------
At4g35610
------>
MYB46(1)
--------->
TOE2(3)
<---------
YAB1
--------->
At4g35610
-------->
P
<----------
DOF2
<---------
ARR14(2)
--------->
ZAT2
--------->
ARR14(2)
--------->
TOE1(3)
--------->
ARR14(2)
-----
---->
ICU4
<---------
CCA1(2)
--------->
At4g35610
--------->
GLK1(2)
-----
-->
RAV1(1)
------>
ZmHOX2a(1)
<---------
ATHB12
<---------
MYB46(3)
<---------
YAB1
------>
ZmHOX2a(2)
tatcagctctcttctcctcatatcccaaccatcaatcatctaactttaatttctattcgttggacaaatctgattattttttatttttgttcgatctcaa
19267800
--------->
ANAC55(2)
--------->
ICU4
--------->
YAB1
<---------
ICU4
--------->
ICU4
<---------
AHL20(2)
<---------
AHL20(1)
---------->
DOF2
<---------
ANAC55(2)
--------->
AHL20(2)
-
--------->
AHL20(2)
<---------
YAB1
------
--------->
YAB1
<---------
AHL20(2)
----------->
GT1
----------
<------
NtERF2
----------->
GT1
--------->
AHL20(1)
>>>>>>>>>>
GT-3b
<---------
ZAT6
<---------
TOE2(3)
<---------
LBD16
--------->
AHL20(2)
---------->
DOF2
<------
ZmHOX2a(1)
---->
ANAC58
--------->
AHL20(2)
--------->
YAB1
<------
ZmHOX2a(1)
--------->
YAB1
<-
---->
ANAC58
<---------
ATHB12
--------->
ICU4
<---------
YAB1
--------->
AHL20(2)
--------->
TOE1(2)
<--
gcattttaggtggcaaatgaataatatggggaaatatttaaagaattataattatgtaaggaaataaaagaaaaataagagaaactaggatagtggtaaa
19267900
<-------
TEIL
--------->
YAB1
<-----------
HVH21
--------->
ARR14(2)
--------->
MYB59
<---------
ARR14(2)
----------->
CBF
--------->
PCF2
<-----------
ARR10
---->
DOF2
--------->
TCP15(1)
<---------
ARR11(1)
->
GT1
<---------
TOE2(3)
<---------
AHL20(2)
<------------
CBF
--------->
ARR11(3)
-----
ZmHOX2a(1)
--------->
At4g35610
<---------
PCF2
<---------
ARR11(3)
<-
--------
ID1
<---------
ANAC55(2)
--------->
ATHB12
<---------
CCA1(2)
*
TSS
---
aggacaataaggtcacatgaactgaaccagatttattcatgggtccctctaaattggttctcttgcccatatctctccatcatatt
cattctcatcacaa
19268000
<----------
DOF2
<---------
DAG2
--------->
GLK1(1)
<---------
ARR11(3)
<---------
ZAT2
--------->
GLK1(2)
--------->
At4g35610
--------->
ARR11(3)
<---------
At4g35610
--------->
CCA1(1)
<-----------
GT1
--------->
RVE1(1)
<---------
YAB1
<---------
HSFB2a(2)
<---------
AHL20(2)
--------
YAB1
<---------
GLK1(1)
--------->
HSFB2a(2)
--------->
AHL20(2)
------>
TOE2(3)
<-----------
GT1
<<<<<<<<<
TBF1
<---------
ICU4
<----------
DOF2
-----
cattataactctgctgatttctctcttcttgttttctcattcttcttctaaaaaatcttgacaactttttgtttttgttttctttctctgaattttttaa
19268100
--------->
CCA1(2)
<---------
ZAT14
<----------
DOF2
--------->
ARR11(3)
<---------
YAB1
------>
MYB46(1)
--------->
CCA1(2)
<---------
YAB1
------>
MYB83
<---------
ARR11(3)
--------->
ICU4
--------->
MYB59
-------
----->
DOF2
------->
TEIL
--------->
ARR11(3)
---------->
DOF2
--------->
ZAT14
<---------
ALFIN1
aagagagagagctatgtagctatgaaacagtaagagatatagatatagagagacagagaaagatgatgatcagtgaagttaggctaaacccactttctat
19268200
<---------
bZIP60(1)
--------->
bZIP60(1)
--------->
YAB1
--------->
WOX13(1)
--------->
WRKY18(1)
------->
TEIL
<------
MYB83
<---------
ANAC58
<------
MYB46(1)
<---------
ALFIN1
<---------
AtLEC2
--------->
MYB59
------>
MYB46(1)
------>
ZmHOX2a(1)
<---------
ANAC46
<---------
YAB1
--------->
ANAC46
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
<---------
ANAC58
<---------
<---------
AHL20(2)
------>
MYB83
<-----------
GT1
--------->
GLK1(2)
<---------
CCA1(2)
-------->
AGL15
<---------
ATHB12
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
<---------
YAB1
<---------
DAG2
ttatgtataattaggtcaatcacatcaccaatctcctcctccaattctcctcctctccttccaaattctagggttttgcttgtatctcaccccctttctc
19268300
------>
ZmHOX2a(2)
--------->
CCA1(2)
<------
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR14(2)
--------->
ARR11(3)
<---------
ARR14(2)
<---------
ALFIN1
<-----------
HVH21
--------->
AGP1
<---------
AHL20(2)
<---------
AGP1
=
<---------
YAB1
<---------
GLK1(1)
<
--------->
At5g28300
<---------
AHL20(1)
--------->
GLK1(1)
<---------
YAB1
-
--------->
STY1(1)
--------->
ATHB51
--------->
TOE1(3)
--------->
YAB1
-
<---------
STY1(1)
--------->
AHL20(2)
---------->
DOF2
---------->
DOF2
<
-
DOF2
----------->
GT1
<---------
MYB52(1)
--------->
TOE2(3)
===========================
aattccctagggaaactgtgaatttcatcaaattccattattttttggtcacacccttaaagagatctgagagttctaaag
atgatgacagatttatctc
19268400
------->
MYC3
------->
MYC2
--------->
CCA1(2)
<-------
MYC4
--------->
At4g35610
<---------
At4g35610
<-------
MYC2
===================================
bZIP_DOF
--------->
At4g35610
---------
TGA1a
--------->
At4g35610
<---------
At4g35610
---------->
DOF2
-------->
TGA1a
---------->
DOF2
<------
ZmHOX2a(1)
--------->
ZAT18
-------->
O2
--------->
ANAC58
>>>>>>>>>
TBF1
----------->
HVH21
<---------
ZAT14
---------
O2
--------->
ANAC58
--------->
At4g35610
<---------
REM1(1)
<-------
MYC3
=========
bZIP_DOF
>>>>>>>>>
TBF1
<---------
MYB52(1)
<---------
ANAC46
<---------
ZAT18
tcacgagagatgaagatgaagaagaagcaaagcccttagcagaagaagaaggagcgcgtgaagtagcagacagagagcacatgttcgacaaagttgtgac
19268500
Previous
Next
AGI:
At2g46870.1
Description:
NGA1 (NGATHA1); transcription factor. similar to NGA2 (NGATHA2), transcription factor [Arabidopsis thaliana] (TAIR:AT3G61970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24343.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340)
Range:
from: 19267987
to: 19269473
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.