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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ALFIN1
--------->
GLK1(1)
--------->
ZAT18
----
ICU4
<---------
ZAT18
--->
YAB1
--------->
PCF2
-->
HAHB4
<---------
ZAT18
<---------
ANAC58
---
ATHB12
<------
MYB83
---------->
ID1
<---------
ANAC58
---
YAB1
<-----------
GT1
--------->
ZAT18
------>
ZmHOX2a(1)
-->
ICU4
<---------
TOE2(3)
<------
MYB46(1)
------>
ZmHOX2a(1)
<----------
DOF2
<----
--
TOE2(3)
--------->
ANAC46
<--------
P
<----------
DOF2
<----------
DOF2
--------->
YAB1
tggtgagatttctaaggcatatttttctctcttgtaggtgcccactttgtctcctccttcattctcctttcgttttcttttcttagtttgttttcatact
18458100
--------->
WRKY38(1)
------->
TEIL
<---------
SPL7
==============
MYC_MYB
--------->
ANAC55(2)
<---------
ANAC55(2)
<---------
TGA1a
<-----------
HVH21
--------->
ANAC58
------>
MYB83
<---------
ZAT2
<---------
MYB52(1)
------>
MYB46(1)
--------->
At4g35610
--------->
ANAC58
--------->
MYB52(1)
--------->
ALFIN1
--------->
ZAT2
<-------
GAMYB
<---------
MYB59
=================================================
bZIP_DOF
--------->
TOE2(3)
<----------
DOF2
<---------
At4g35610
--------->
ANAC58
--------->
TOE1(3)
------
DOF2
<-------
TEIL
<-------
TEIL
--------->
ANAC58
<---------
MYB59
ttgatgtctttgaaaattcatgtggagatgcatacacgagctcgtcacgtaccgttggctataacctaaacctaactacatagttctatatatatccact
18458200
<---------
ANAC55(2)
--------->
ANAC55(1)
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
----------->
GT1
<-------
TEIL
<------
MYB46(1)
<------
MYB83
--------->
ANAC55(2)
<---------
ANAC58
<---------
ANAC58
-------
--------->
ATHB12
<------
ZmHOX2a(1)
--------->
MYB59
<-------
<---------
YAB1
<---------
TOE2(3)
----------------------->
TaNAC69(2)
<---------
ARR11(3)
<---------
TOE1(3)
--------->
AHL20(2)
<-------
TEIL
attttcatacaagttcaatatcaattttcattgaaatgagtttgaggataaaacaagaacaaaaaatataagttgggttcgtaaatacgtaagttatcaa
18458300
-
-
<-
<--
<---------
At4g35610
<--
<---------
CCA1(2)
<----
------>
ZmHOX2a(2)
--------->
CCA1(2)
<---------
ARR11(3)
<------
ZmHOX2a(2)
<---------
ARR14(2)
--------->
ARR11(3)
--------->
ARR11(3)
--------->
AGP1
<---------
AGP1
--------->
ARR14(2)
--------->
ARR14(2)
<---------
ARR11(3)
<---------
AHL20(2)
--------------->
AGL15
<---------------
AGL15
--------->
AHL20(1)
<---------------
AGL15
======================
--------->
AHL20(2)
=======================================================================
MADS_MADS
--------->
AHL20(2)
<-----------------
AGL3
--------->
DAG2
----------------->
AGL3
-->
YAB1
<-----------------
AGL2
---------->
DOF2
--------->
GLK1(1)
------
--
YAB1
<---------
ICU4
<---------
CCA1(2)
---------->
DOF2
<-----------
GT1
<---------
ARR14(2)
aaaaaaaattgaaactctaaaatcaatactatttgtggatctatatccagcaaacaaaggaaaaggaatgtattactgaattccaaaataagatccagtg
18458400
--------->
ANAC58
<---------
TOE2(3)
--------->
ANAC58
---------->
DOF2
<---------
MYB52(2)
------>
MYB83
<------
NtERF2
------>
MYB46(1)
----->
NtERF2
<---------------
AGL15
---------->
RAV1(1)
<---------
YAB1
--------------->
AGL15
-
---------
ID1
--------->
YAB1
<---------
MYB59
<-
-------------------
WRI1
----------------->
AGL3
<--
-------
PCF2
----------->
GT1
--------->
CCA1(2)
--------->
MYB52(2)
----
-----
MYB46(3)
<------------
CBF
---------->
DOF2
----------------->
AGL1
----
============================================================================
MADS_MADS
<----
--->
ALFIN1
------------>
CBF
------------>
CBF
<---------
ARR11(3)
--------->
MYB59
<-----
ggcgacaaacccaagcccaattgtaattcaggcccaatgggcctacaaagcagaacaagataccaaattaaggcacaagttagttcgaaaaactttctcc
18458500
<------
NtERF2
--------->
RAP2.6(2)
<---------
RAP2.3(1)
<---------
DEAR3(2)
<---------
ATERF1(1)
----------->
RAV1(1)
<---------
ORA47(2)
------>
NtERF2
--------->
ATERF1(2)
<---------
DEAR3(1)
<---------
RAP2.3(3)
<------
NtERF2
<---------
ATERF1(1)
<---------
ORA47(2)
<---------
RAP2.3(1)
--------->
LBD16
<---------
DEAR4(2)
<---------
RAP2.6(1)
<---------
ERF1
<---------
RAP2.3(2)
--------->
ATERF1(2)
<---------
ATERF1(2)
<---------
DEAR3(1)
--------->
ATERF1(1)
<---------
ARR14(2)
--------->
ARR14(2)
<------
NtERF2
--------->
RAP2.3(1)
*
TSS
--------->
ANAC46
<----------
DOF2
-------->
LBD16
<---------
RAP2.3(2)
<---------
AHL20(2)
--------
ANAC46
<---------
ATERF1(2)
<---------
WOX13(1)
-------
LBD16
------>
NtERF2
--------->
ATHB12
----->
LBD16
--------->
DEAR3(1)
<---------
ANAC58
<---------
ANAC58
-->
NtERF2
<---------
LBD16
<---------
ANAC58
<---------
ANAC46
-----
DEAR3(1)
--------->
ATERF1(1)
<---------
YAB1
--------->
AHL20(2)
<-----------
HVH21
----
LBD16
<---------
RAP2.3(1)
<---------
ANAC46
<---------
ANAC58
<---------
GLK1(1)
----
ggcggaaacttacgccggcggcacaaactttgtgtcttgctcaagatgattgcgtcgaattttatgtaaacaattggctctccg
atgttgtcagccatgg
18458600
--------->
ANAC58
--------->
ANAC58
<-------
TEIL
--------->
ARR14(1)
--------->
CCA1(2)
<---------
ARR14(2)
-----
<-----------
GT1
--------->
ARR14(2)
<------
<---------
YAB1
--------->
ANAC58
--------->
ARR11(1)
<---------
At5g28300
--------->
ICU4
------>
ZmHOX2a(1)
<---------
SPL7
<-----------
GT1
--->
TEIL
<----------
DOF2
--------->
ANAC58
----------->
ARR10
<---------
GLK1(2)
-
atgttatgattcactcttcaagctttctcctcccttgcgacgaaacttgtgggacgagatacgctctcgttgttcttaaccagaatttaccacgattcac
18458700
<---------
ZAT14
--------->
REM1(2)
--------->
GLK1(2)
--------->
KAN4(2)
<---------
ARR14(2)
<---------
KAN4(1)
<---------
HSFB2a(1)
<----------
TaMYB80
--------->
KAN4(1)
<---------
KAN4(2)
<---------
MYB52(1)
--------->
HSFB2a(1)
--------->
GLK1(2)
---------->
TaMYB80
<-----------
GT1
------->
TEIL
--------->
ARR14(2)
<---------
LBD16
<---------
ICU4
<---------
AHL20(2)
<---------
ARR14(2)
---->
ANAC46
--------->
ICU4
--------->
AHL20(2)
<---------
YAB1
-----
GT1
----------->
GT1
<---------
ARR11(3)
<---------
AHL20(2)
--------->
ZAT14
----->
ZmHOX2a(1)
--------->
At5g28300
--------->
AHL20(1)
<---------
YAB1
<---------
ANAC46
tcctcttctctgggaacatg
gtaattatctctctattcttcagaatatataaatgaatctgttttttttttattacgaatattctgtgtagaacag
caaa
18458800
<------
NtERF2
--------->
RAP2.3(1)
<---------
RAP2.3(1)
<---------
RAP2.3(3)
<---------
RAP2.3(2)
<---------
DEAR3(1)
--------->
At4g35610
<----------
DOF2
<---------
At4g35610
<---------
DAG2
<---------
ZAT14
<-----------
GT1
<---------
ARR11(3)
--------->
ZAT14
--------->
ANAC46
--------->
ARR11(3)
acttcgtctctgtgctgatggaggcgctaatcgcatctacgacgaattacctctcttcttccctcacgaagacccttttgtcattcgaaacag
gtctcag
18458900
<-
>>>>>>>>>
TBF1
<---------
AHL20(2)
<-
<------
ZmHOX2a(1)
<----------
DOF2
<----
<---------
LBD16
---------->
ID1
--------
<-----------
RAV1(2)
---------->
DOF2
<---------
AHL20(2)
<-------
atttatgtctctatttctctcatagagaaaggtttcaggaagaagaagttgaaactggaaagttttgtctttttattttatagatagttctgagaattgt
18459000
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AGI:
At2g44750.1
Description:
TPK2 (THIAMIN PYROPHOSPHOKINASE 2); thiamin diphosphokinase. similar to TPK1 (THIAMIN PYROPHOSPHOKINASE1), thiamin diphosphokinase [Arabidopsis thaliana] (TAIR:AT1G02880.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO39990.1); contains InterPro domain Thiamin pyrophosphokinase; (InterPro:IPR006282); contains InterPro domain Thiamin pyrophosphokinase, vitamin B1-binding region; (InterPro:IPR007373); contains InterPro domain Thiamin pyrophosphokinase, catalytic region; (InterPro:IPR007371); contains InterPro domain Thiamin pyrophosphokinase, eukaryotic (InterPro:IPR016966)
Range:
from: 18458501
to: 18459950
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.