Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                     <---------YAB1                                                                                   <---------AHL20(2)                                                                                   --------->ATHB51                                                                           <-----------RAV1(1)-------                            <---------GLK1(2)                            ------>ZmHOX2a(1)    <------                  <---------GLK1(2)                                    --------->ZAT14        <------ ------->ATHB12   --------->ARR11(3)                        <---------ANAC58<-------GAMYB  ---------- ---YAB1   --------->AHL20(2)                 --------->YAB1--------->ANAC55(2)    --------->AHL20(2) ---AHL20(2)      <---------ARR11(3)         <---------YAB1 <---------ANAC58========================= --AHL20(2)<---------AHL20(2) <---------MYB46(3)           ------->TEIL<---------ZAT14    <----------   ttgataggcgaatttaaatagattttggcagattgttgcaagttgctatcatcgggctctgtacgtgttccagtcctctgttgaattatttatgtcacgt  18156000     ------->TEIL ----->REM1(2) ---->ALFIN1 --MYC3 ->MYC3 ->MYC2 --MYC2 -->O2 ---ANAC58                                                    -------->ATHB1 ---O2  <---------AHL20(2)                                    --------->ATHB12 ---bZIP60(2)                                                 <---------ICU4 ---ANAC46                                                   --------->AHL20(2) ---ANAC55(2)                                                <---------AHL20(2) ---ANAC55(1)                                                --------->ICU4 -->TGA1a                                                    <---------ATHB51 -->ANAC55(2)                                             --------->AHL20(2) ---ANAC58                                            ----------->GT1--------->ANAC58 ---TGA1a            --------->TOE1(3)               --------->DAG2  --------->ANAC58 ->HVH21--------->ATHB12                            ---------->DOF2  --------->ANAC46          ------ ===MYC_MYB    ------>ZmHOX2a(2)               ----------->GT1--------->ATHB51          ----------->GT1 -HVH21--------->ICU4--------->TOE2(3)  ---------->DOF2----------->GT1           <-----------GT1   gtagatgtatttattgatctaaacctaaaacgatagaagaactaaagtcttgtgaaaagttaaattattgcaagctatactatttacaaaatgtaaaaaa  18156100                      <------MYB83                             <----------DOF2                     --------->MYB59                        <---------ARR11(3)              <----------DOF2                       --------->bZIP60(1) --------->ARR11(3)        --------->ICU4<------MYB46(1)               <---------bZIP60(1) <---------ARR11(3)        <---------ATHB51                          <---------TGA2(2) ---------->DOF2    ------->TEIL<- ---->DOF2 <---------YAB1            --------->GLK1(1)      --------->ARR11(3)    --------->MYB52(1)   agaaactgaaattattcttttgtttggttcacattaggcatttccaaattgctgatgtcaaacatctttgcaaagttcttctcccaacgaattttgaaaa  18156200                                                               --------->TOE2(3)                                                            <-----------GT1               --------->AHL20(2)                         <---------AHL20(2)          <---------YAB1                                  --------->AHL20(2)                        -        <-----------GT1 <---------YAB1                 <---------ICU4--------->AHL20(2) <------------CBF ----------GT1 <---------AHL20(2)  ---------->DOF2    --------->ICU4 --------->YAB1 <---------LBD16 <   ttcaccattttcacgattaaaattttaaaattgactaaaaagttttaatctcgcacataattaaaccacaataaaaaaacttggacttcggattgttttc  18156300                                                                        <---------ANAC55(2)                                            --------->AHL20(1)          --------->ANAC55(2)                                            <---------AHL20(1)          <---------O2                                            --------->AHL20(2)          --------->O2                                           <---------AHL20(2)           <---------TGA1a            <-                                           --------->AHL20(2)        ----------->HVH21           <---    --------->At4g35610            <------------CBF                 <-----------HVH21            ----    <---------At4g35610      <----------DOF2<---------AHL20(2)     --------->ANAC46           -------  --------->ZAT18    <---------ANAC58----------->GT1               <---------ANAC55(2)        <------ --------->ALFIN1    <---------ANAC58--------->YAB1  --------->ANAC55(2)============================= ------>MYC3  <---------ARR14(2) <---------AHL20(2)<-----------GT1 <---------ANAC58       <---------MYB52(1) -------MYC3  --------->ARR14(2) <---------YAB1<---------YAB1      <---------ANAC58     *TSS<--------   catgtgggctgattcgaatttgggcttgggcctttttaattgtaattttatttttacttatttgtaaatgcgtcacatgtcttcttcgctctgttcggct  18156400                                        --------->ZAT18                                        <---------ZAT18                                        --------->WRKY38(1)                                     <---------ANAC46                                     <---------ANAC58 ---------DOF2                       <---------ANAC58 ------At4g35610                 --------->MYB52(2)              <---------GLK1(1) ----->At4g35610                 <---------MYB46(3)   <---------MYB52(1) -->At4g35610                  <---------MYB52(1)    <-------GAMYB ---At4g35610              <---------At5g28300      --------->MYB52(2) =========bZIP_DOF        <-----------GT1           <---------MYB46(3)        <---------At4g35610 -RAP2.6(2)            --------->WOX13(1)          <-------TEIL  --------->GLK1(1)   gcttcatcgagcggaagtctctagccaattaccgtttgttcgtggactcgaggttcgttgttcttagatttcccagactcatctgtttctgcaatccatt  18156500                                     <---------GLK1(1)                                     --------->GLK1(1)                        --------->bZIP60(2)  <---------WOX13(1)                        --------->ANAC46  ------>ZmHOX2a(1)     <----------DOF2                        --------->ANAC58 <---------MYB59    <---------TOE1(3)               --------->ANAC55(2)  <----------DOF2  <---------TOE1(3)<---------ZAT18          <-----             <-----------GT1    <---------LBD16      <---------TOE2(3)--------->ZAT18       ---------         <----------DOF2--------->ANAC58----------------->AG<---------TOE2(3)             <---------LBD16   tcaaagtttctctttttacttaatccaagtcattcgcgcatttcctaattggtctgaggtttagggttttagggcacatagttttgtttgattcgggagt  18156600                                                                              ------>ZmHOX2a(2)                                                                            <---------ARR14(2)                                                                            --------->ARR11(3)                                                                            --------->ARR14(2)                                                                 <---------WOX13(1)                                                               --------->ATHB12--------->HSFB2a(2)                                                              <---------YAB1<---------AGP1                    <------MYB83                              <---------AHL20(2)                    <------MYB46(1)                      <---------AHL20(2) <---------ARR11(3)                   --------->MYB59                 <----------DOF2   <---------WOX13(1)            <-      <---------At4g35610                       --------->ARR11(3)   <----------DOF2            ----- ----KAN4(2)       --------->MYB46(2) <----------DOF2  --------->ANAC55(2)  ------->TEIL----------->HVH21 >LBD16   --------->TOE1(2)    <---------YAB1   <---------ARR11(3) --------->ATHB12   --------->At4g35610   aatcgttgagatgctacgagtttggtattcaagatgattccttttctcaaggtctttatgtaatttgattgatttatggatctcgaattgctgacatgaa  18156700                             --------->KAN4(2)                            <---------KAN4(1)                            --------->KAN4(1)                            --------->GLK1(1)                            <----------TaMYB80                            <---------GLK1(1)                            --------->HSFB2a(1)                            <---------HSFB2a(1)                          --------->ARR11(3)            --------->MYB111(2)                                          --------->ARR14(2)       ---------->DOF2     <---------KAN4(2)                             <---------ARR11(3)     <----------DOF2       <---------ARR14(2)                      <---------MYB46(3)    <---------ANAC46       <---------ARR11(3)                     <---------ANAC46    <---------ANAC58       --------->ARR11(3)                   <------MYB46(1)    <---------ANAC58       ---------->TaMYB80            <---------MYB59 <---------ARR14(2) ---------->ID1            --------->ARR14(2)            ------>ZmHOX2a(2) ----------RAV1(1) <----------DOF2                     <---------AGP1  ----------->ARR10   ---------- -->TEIL    <---------MYB46(3)--------->GLK1(2) --------->ATHB12<------MYB83   <---------TOE2(3)    -   tttgttgcttaaagttgttggctttgtgggatattctgaggggtcttgtttgatttggatctaatttggtgggcagatattgtggtttcttagcaaagaa  18156800                             --------->MYB46(3)                        --------->HSFC1(1)         <---------ANAC58                        <---------HSFC1(1)         <---------ANAC46                        --------->HSFB2a(2)        <---------ANAC58    <---------ZAT14     <---------HSFB2a(2)     --------->GLK1(1)   --------->ALFIN1  --------->GLK1(2)     --------->At4g35610                <---------MYB46(3) <---------ANAC46  <---------HSFC1(2)      <---------At4g35610   --------->LBD16 >DOF2             --------->HSFC1(2)   ----------->RAV1(2)     <---------ANAC58 -------->ATHB12---------->DOF2         <---------At4g35610     <---------ANAC58                   <-   gatgagtggagttggagagaaagcttctggaacaactaagacacctgctgatttcttgaaatctatccgtggtaaaccagttgttgtcaagctcaactct  18156900  Previous    Next  AGI:  At2g43800.1    Description:  formin homology 2 domain-containing protein / FH2 domain-containing protein. Identical to Formin-like protein 2 precursor (FH2) [Arabidopsis Thaliana] (GB:O22824); similar to AFH1 (FORMIN HOMOLOGY 1), actin binding [Arabidopsis thaliana] (TAIR:AT3G25500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46319.1); contains InterPro domain Actin-binding FH2 and DRF autoregulatory; (InterPro:IPR003104); contains InterPro domain Actin-binding FH2 (InterPro:IPR015425) Range:  from: 18152798    to: 18155974    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g43810.1    Description:  small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative. similar to small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative [Arabidopsis thaliana] (TAIR:AT3G59810.1); similar to unknown [Populus trichocarpa] (GB:ABK93371.1); similar to unknown [Populus trichocarpa] (GB:ABK93423.1); contains InterPro domain Like-Sm ribonucleoprotein, core; (InterPro:IPR001163); contains InterPro domain Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core; (InterPro:IPR006649); contains InterPro domain Like-Sm ribonucleoprotein-relat Range:  from: 18156388    to: 18158372    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.