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Chromosome 1
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Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
ARR11(3)
<---------
AHL20(2)
--------->
ARR11(3)
<---------
AHL20(1)
<-----------
HVH21
--------->
ARR11(3)
<---------
ANAC58
<---------
ARR11(3)
<---------
ANAC58
--------->
ATHB12
--------->
AHL20(1)
<---------------
AtSPL8
<---------
MYB52(1)
<-------
TEIL
--------->
AHL20(2)
<---------
ARR11(3)
<---------
CCA1(2)
--------->
ICU4
---------->
DOF2
--------->
AHL20(2)
------>
ZmHOX2a(1)
-
----------->
GT1
<---------
YAB1
--------->
GLK1(2)
---------->
DOF2
<-----------
GT1
-------->
P
<
agagttgtgaaatgtttagtttcattgcatcaaagagaatatattttttcaaataaaagatagtacttgtcacttcctatatctcttacctgttaactag
17909200
<---------
YAB1
--
<------
MYB83
--------->
GLK1(2)
--
--------->
AHL20(2)
<------
MYB46(1)
<---------
YAB1
<--
--------->
AHL20(2)
----------->
GT1
<---------
AHL20(2)
<----
-------->
AHL20(2)
------>
ZmHOX2a(1)
--------->
ZAT2
--------->
AHL20(2)
-----
---------
AHL20(2)
--------->
AHL20(2)
<---------
ZAT2
--------->
AHL20(2)
<------
aaataaataaacaaatccaaaaaaaatgtgtcctacttacttactaatgcttcaagcttggtaacacatcaaattaatattctgatatatcatatatcac
17909300
---------->
DOF2
---->
MYB83
--------->
ATHB12
---->
MYB46(1)
<---------
AHL20(2)
--------->
ICU4
-------
CCA1(2)
<------
ZmHOX2a(1)
<---------
YAB1
<--
-----
ANAC55(2)
<---------
LBD16
---------->
DOF2
--------->
YAB1
---
---->
ANAC55(2)
<---------
AHL20(2)
<---------
YAB1
<---------
WOX13(1)
----
-----
GT1
--------->
AHL20(2)
--------->
MYB59
--------->
ANAC46
<-------
TEIL
---------
ctatcttacaaagtcattaattttcaggatggaagagattagattaggcactgcttattatacgataaagattgatatggatgcatcatatttccgaaat
17909400
------
<---------
MYB52(1)
--------->
AHL20(2)
-------
<---------
TOE2(3)
<---------
AHL20(2)
<------
--------->
ANAC46
--------->
AHL20(1)
---------
-------------
AtSPL8
--------->
ANAC58
--------->
AHL20(2)
--------->
YAB1
------>
DAG2
<---------
At5g28300
--------->
ANAC58
--------->
YAB1
------>
DOF2
<---------
LBD16
--------->
ANAC46
--------->
ANAC58
<---------
ATHB12
----
>
LBD16
<-----------
GT1
--------->
ANAC58
<---------
MYB52(1)
----------------->
AGL3
aaagtacaagtatttacggtatgtgattttgctcgaaacttaagagtcgtttcttagtaagaaattaattaacatcgacacaaatcaaaaatagtaacga
17909500
<---------
ICU4
<----
--------->
At4g35610
<--------
HAHB4
------
----------->
GT1
<---------
At4g35610
--------->
YAB1
<------
--------->
AHL20(2)
<---------
At4g35610
--------->
ATHB12
<---------
ICU4
<---------
AHL20(2)
--------->
TOE2(3)
*
TSS
--------->
YAB1
--------->
REM1(1)
->
GAMYB
<-----------
GT1
--------->
TOE1(3)
<---------
YAB1
--------->
YAB1
-------
-->
MYB46(3)
------->
TEIL
<---------
At4g35610
<---------
ATHB12
<---------
YAB1
<-------
---
MYB52(2)
<-------
TEIL
--------->
At4g35610
--------->
ICU4
--------->
YAB1
--------->
YAB1
>
MYB52(1)
----------->
TBP
------>
ZmHOX2a(1)
--------->
MYB46(3)
<-------
TEIL
<---------
ANAC58
--->
TEIL
------->
TEIL
<---------
CCA1(2)
--------->
REM1(1)
<---------
TOE2(3)
<---------
ANAC58
acataaaaatgtaactatatatacatgtatccttaagctgctgctactacaacaactcgc
taatcattaagtttcataactata
atggcttcatcatcat
17909600
------>
MYB46(1)
<---------
MYB59
<---------
MYB46(2)
<---------
MYB111(1)
-----
YAB1
------->
TEIL
<-----------
HVH21
--->
TOE2(3)
--------------->
AtSPL8
<---------
ZAT2
---
ICU4
<----------
DOF2
<---------
At4g35610
-->
YAB1
--------->
GLK1(2)
------>
ZmHOX2a(2)
------>
MYB83
--------->
ZAT2
--
YAB1
--------->
YAB1
<---------
TOE2(3)
<---------
DAG2
--------->
At4g35610
caatatcaaatcacaagattccaaacacactaatgtttttggtgatcgtaaactttttgtacctaattcaaactaattcagctgtcagtatcagttccaa
17909700
<---------
At4g35610
--------->
GLK1(2)
--------->
ARR14(2)
<---------
ANAC46
<---------
GLK1(2)
--------->
ZAT2
<---------
ANAC58
<---------
ARR11(3)
<---------
ANAC58
--------->
O2
<---------
HSFB2a(2)
------>
MYB83
------->
GAMYB
<---------
ALFIN1
--------->
At4g35610
------>
MYB46(1)
--------->
MYB46(3)
------->
GAMYB
<---------
ARR14(2)
--------->
YAB1
--------->
MYB52(2)
------->
TEIL
ttccaactcccacttctcaagattctcgagacatcgaagctcaccatcatcaaaaaccaaacaagggtttcttgcaacggtccaagagagtatgaaccat
17909800
------->
MYC3
<-------
MYC3
<-------
MYC2
<----------
DOF2
--------->
TGA1a
--
=====================================
bZIP_DOF
---------
<---------
DAG2
<---------
ALFIN1
<---------
At4g35610
--------->
TOE2(3)
<---------
ALFIN1
--------->
At4g35610
<-----------
GT1
--------->
SPL7
--------->
ZAT2
<----------
DOF2
----------->
GT1
------->
MYC2
--------->
ANAC46
---
<---------
ANAC58
<-----------------------
TaNAC69(2)
-----------------
<---------
ANAC58
--------------->
AtSPL3
<------
ZmHOX2a(2)
<---------
ZAT2
gctctcttggctcgttctcttgctttcaacctcactctttctcatcgaaccgtacaaacccacacgttcgatcccatccacgactgcctcgagctgctcg
17909900
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
<---------
MYB52(2)
----------->
HVH21
<---------
ICU4
--------->
ANAC58
<---------
O2
--------->
YAB1
--------->
ANAC58
<---------
TGA1a
-------->
HAHB4
<---------
ALFIN1
--------->
TGA1a
--------->
ICU4
--------->
ZAT14
--------->
O2
<---------
YAB1
--------->
At4g35610
<---
<---------
ALFIN1
--------->
YAB1
<---------
At4g35610
----
---->
NtERF2
--------->
LBD16
--------->
ZAT2
--------->
ANAC58
>
At4g35610
<---------
ANAC46
---------->
CDC5
------->
TEIL
<---
------>
ANAC46
<---------
LBD16
--------->
ARR11(3)
--------->
ZAT18
--------->
ANAC58
---->
WRI1
--------->
AtLEC2
<---------
ARR11(3)
--------->
ANAC46
--------->
ANAC46
acgacacacttgacatgttatctcgcatccatgcggataatgatgaagaagatgtccatacatggctaagcgcagcactcacgaaccaagacacttgtga
17910000
<---------
MYB52(1)
------>
MYB83
<---------
WRKY18(1)
--------->
MYB52(1)
<---------
ANAC58
<---------
MYB59
<---------
ZAT18
--------->
AtMYB61
--------->
ZAT2
<---------
ANAC58
<---------
MYB52(2)
--------->
STY1(2)
--------->
ANAC58
--------->
ANAC58
<-------
GAMYB
<---------
ANAC58
<---------
ARR14(2)
--------->
ANAC58
--------->
ANAC46
<---------
MYB46(3)
<-------
--------->
ARR14(2)
--------->
ANAC46
<---------
ANAC58
<---------
MYB52(1)
<----------
DOF2
------
ZAT2
--------->
GLK1(2)
<---------
LBD16
<---------
ANAC58
-------->
P
--------->
WRKY38(1)
----->
At4g35610
--------->
AtLEC2
<---------
GLK1(1)
------>
MYB46(1)
<---------
STY1(2)
------
At4g35610
--------->
LBD16
<---------
ANAC58
--------->
ANAC58
--------->
MYB52(2)
<-------
gcagagccttcaagaaaaatccgagtcatacaaacacggacttgcgatggatttcgtcgcaagaaacctaaccggtttgttgactagctcgcttgacttg
17910100
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AGI:
At2g43050.1
Description:
ATPMEPCRD; pectinesterase. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT3G59010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45285.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501)
Range:
from: 17909561
to: 17911520
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.