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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ICU4
--------->
HSFB2a(1)
<---------
ATHB12
------>
ZmHOX2a(2)
------>
MYB83
<------
ZmHOX2a(2)
--------->
MYB46(3)
<---------
ARR11(3)
--------->
AtMYB61
<---------
ARR14(2)
--------->
MYB46(3)
-----
--------->
ARR11(3)
<---------
ARR14(2)
------>
MYB46(1)
--------->
ARR14(2)
--------->
ARR14(2)
------>
MYB83
--------->
ANAC58
<---------
CCA1(2)
<---------
MYB59
--------->
ANAC58
<---------
GLK1(1)
--------->
AtMYB61
--------->
ANAC46
--------->
GLK1(1)
------->
GAMYB
---------
ALFIN1
<-------
TEIL
------>
MYB46(1)
--------->
ANAC58
---->
At4g35610
---------->
DOF2
<---------
ALFIN1
------->
GAMYB
--------->
MYB46(3)
-----
At4g35610
--------->
MYB46(3)
--------->
WOX13(1)
--------->
ZAT6
--------->
ANAC58
ctccacacaagatccctaaccaaagtgcatatccaccaatccaaacattccatactctaatacagataacacaactcccaattcacaaccaaacctatac
17409700
<
------
--------->
GLK1(1)
------
<---------
ARR14(2)
---------
--------->
ARR14(2)
<--------
<---------
MYB52(1)
--------->
ZAT2
--------->
LBD16
<---------
ZAT2
--------->
DEAR3(2)
--------->
ANAC46
--------->
ZAT14
--------->
LBD16
--------->
LBD16
<---------
ZAT14
--------->
ANAC46
---------->
DOF2
<---------
LBD16
<---------
DAG2
------
<---------
LBD16
--------->
ARR14(2)
----------------------->
TaNAC69(2)
---------
------>
ZmHOX2a(1)
<---------
ARR14(2)
----------->
RAV1(2)
<---------
GLK1(1)
<--------
---->
ANAC46
--------->
YAB1
--------->
LBD16
--------->
ZAT6
--------->
LBD16
<----------
DOF2
<------
tccaatctcctccgcatcataaaccgacaatcccgatttgaaaagtcacagtac
ctggtgactccccggtatatggaactccttttcccagcagtgcacg
17409800
<---------
ALFIN1
------>
NtERF2
<---------
ATERF1(1)
--------->
ABI4(1)
--------->
RRTF1(3)
--------->
DEAR3(1)
--------->
DREB2C(2)
--------->
RRTF1(2)
--------->
RAP2.3(3)
--------->
ANAC46
<-----------
GT1
--------->
RAP2.3(2)
------
NtERF2
--------->
RAP2.6(2)
--->
ANAC58
--------------->
AtSPL3
--------->
ATERF1(2)
--->
ANAC58
--------------->
AtSPL8
<---------
ATERF1(2)
>
ZAT18
<---------
At4g35610
--------->
ERF1
-
ZAT14
--------->
At4g35610
--------->
RAP2.3(1)
--->
ANAC46
------>
ZmHOX2a(1)
<---------
ATERF1(1)
>
ZAT14
--------->
ANAC58
<---------
ARR11(3)
-
ZAT18
--------->
ANAC46
----------->
RAV1(1)
<------
NtERF2
---
LBD16
--------->
ANAC58
------>
ZmHOX2a(1)
--------->
TOE2(3)
--------->
ANAC46
gaggcattttactaatacgctccttagctgtacaacctctctccttcttcgccttcttaaaacctctatacaacaacatctgatcactcgccgccactgt
17409900
--------->
DEAR3(1)
--------->
ANAC58
--------->
REM1(1)
--------->
ANAC58
-
--------->
At4g35610
--------->
ANAC46
-
------>
NtERF2
--------->
bZIP60(1)
-
--------->
DEAR3(1)
<---------
ATERF1(1)
---
--------->
RRTF1(3)
--------->
DEAR3(1)
<--
--------->
RAP2.6(2)
--------->
At1g77200
---
--------->
RAP2.3(2)
------>
NtERF2
---
--------->
RAP2.3(1)
------>
NtERF2
<--
<---------
ATERF1(1)
<---------
bZIP60(1)
<--
------>
NtERF2
--------->
ANAC46
--------->
HSFB2a(1)
--------->
LBD16
------>
NtERF2
<---------
HSFB2a(1)
--------->
DEAR3(1)
--------->
TOE1(2)
--------->
ARR14(2)
<---------
ALFIN1
----------->
HVH21
------>
ZmHOX2a(2)
<--
--------->
ANAC46
------>
ZmHOX2a(2)
------>
NtERF2
--------->
HSFC1(2)
------>
ZmHOX2a(1)
--------->
DEAR3(2)
--------->
ICU4
<---
------>
ZmHOX2a(1)
=====================================
HOX2a_HOX2a
--
<---------
ALFIN1
--------->
MYB59
--------->
DEAR3(1)
--------->
ATHB12
----
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
--------->
DEAR3(2)
<---------
HSFC1(2)
<---------
ZAT2
<---------
ATERF1(1)
<---------
TOE1(2)
--------->
bZIP60(1)
<---------
ARR14(2)
--------->
ZAT2
<---------
ALFIN1
==============================
HOX2a_HOX2a
<---------
YAB1
------
ctccgagctctctcctcctcctccgccgctacatcctgcttctgtcttaggtccttgatccgacgacgacaccgacgccat
gatcggaaccttcttccca
17410000
------>
MYB46(1)
------>
MYB83
--------->
AtMYB61
<---------
MYB59
------->
GAMYB
--------->
MYB46(3)
----->
MYB46(1)
------->
P
--------->
ANAC58
----->
MYB83
--------->
ANAC46
------>
DEAR3(1)
-------
MYB55(2)
------>
MYB46(3)
<---------
HSFB2a(1)
------>
AtMYB61
<---------
ZAT2
-------
MYB111(2)
<---------
HSFC1(2)
-------
MYB46(2)
--------->
HSFC1(2)
-------
MYB111(1)
<---------
At4g35610
<---------
At4g35610
------
MYB52(2)
--------->
HSFB2a(1)
--------->
At4g35610
------->
MYB55(1)
--------->
ANAC58
---------->
DOF2
----->
MYB46(3)
--------->
ANAC58
--------------->
AGL15
----------->
GT1
<---------
ZAT2
--->
ANAC46
--------->
ANAC58
--------->
MYB52(1)
---------->
DOF2
--------->
ZAT2
<-
ccaaccaaaccctagacgcactatggctaagcaaaacggagcttcttgatacagtagaagtaaagagagagaaaaagagagtgagagctgagaaaattca
17410100
<---------
ANAC55(2)
<---------
LBD16
--------->
ARR11(3)
--------->
MYB52(1)
<--------
ATHB1
--------->
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(1)
--------->
ANAC46
------->
GAMYB
<-----------
GT1
<
<----------
DOF2
--------->
ICU4
--------->
TOE2(3)
<---------
AHL20(2)
<---
<---------
DAG2
<---------
ATHB12
<---------
HSFB2a(2)
--------->
AHL20(2)
<----
<----------
DOF2
*
TSS
<----------
DOF2
--------->
MYB52(1)
--------->
ANAC55(2)
---------
DOF2
<-----------
GT1
<---------
YAB1
--------->
HSFB2a(2)
<---------
AHL20(1)
<-----
actttgactctttcctttttcaccgaat
acaatgattttgatttttgagtcttttctagtaatctaaacaacggcaaaataaaattacggacttaattta
17410200
------------>
CBF
<----------
DOF2
<---------
ANAC58
<---------
TGA1a
<---------
ANAC58
--------->
YAB1
<---------
O2
--------->
ICU4
--------->
ANAC55(2)
--------->
ANAC46
<---------
ICU4
====================
bZIP_DOF
<---------
ANAC55(2)
<---------
DAG2
<---------
ARR11(3)
<---------
LBD16
=====================
---------
MYB52(1)
<----------
DOF2
--------->
ARR11(3)
------->
TEIL
<---------
ANAC58
------
YAB1
<-----------
GT1
--------->
YAB1
<------------------
SPL14
<-----------
TGA1
-----
At5g28300
---------->
ID1
---------->
DOF2
--------->
MYB46(3)
<---------
ANAC58
------
GT1
<-----------
GT1
===========================================
bZIP_DOF
--
ccattacgtcccaattttgtttttcctttttcaacgaagcgaaagataataactgcaacggctatgtacggagacgagggtgctttcgtcattagtagaa
17410300
<---------
ICU4
--------->
ICU4
<---------
ICU4
--------->
ICU4
<---------
At4g35610
--------->
ZAT14
<---------
ARR11(3)
--------->
ZAT18
<---------
ANAC58
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
--------->
ANAC55(2)
--------->
O2
<-------
MYC2
<---------
O2
<-------
MYC3
<---------
ANAC58
<-------
PIF5
<---------
ANAC55(1)
------->
PIF5
<---------
bZIP60(2)
<-------
MYC4
<---------
TGA1a
------->
MYC4
--------->
TGA1a
------->
MYC2
----------->
bZIP911(2)
<---------
ANAC55(2)
<---------
TOE2(3)
<---------
TGA2(2)
------->
MYC3
<---------
ARR14(2)
----------->
HVH21
--------->
O2
--------->
ARR14(2)
----------->
TGA1
<---------
ANAC46
<---------
GLK1(2)
--------->
At4g35610
<---------
TGA1a
--------->
HSFB2a(2)
--------->
ALFIN1
<---------
At4g35610
--------->
TGA1a
<---------
HSFB2a(2)
<---------
ANAC46
======================
bZIP_DOF
<---------
O2
------>
ZmHOX2a(2)
<---------
AHL20(2)
--------->
GT1
--------------->
AtSPL8
------->
TEIL
<---------
LBD16
--------->
AHL20(2)
taggtttatatgctgacgtgtactaattatgtccacgtgtacgtgatctgtttctggattctgacattttaatgtgaagtgtttcccaactctcgcctcg
17410400
<---------
ZAT14
------>
ZmHOX2a(1)
--------->
AHL20(1)
--------->
KAN4(2)
<---------
LBD16
<-------
<---------
HSFB2a(1)
<--------
ATHB1
--------->
GLK1(1)
--------->
KAN4(1)
<---------
AHL20(2)
--------->
ARR14(2)
--------->
HSFB2a(1)
--------->
YAB1
<---------
AHL20(2)
<---------
KAN4(1)
<---------
ICU4
--------->
AHL20(2)
<----------
TaMYB80
<---------
AHL20(1)
<---------
ARR14(2)
---------->
TaMYB80
--------->
AHL20(2)
<---------
GLK1(2)
<---------
KAN4(2)
--------->
ICU4
<---------
AHL20(2)
--------->
ANAC46
--------->
ZAT14
--------->
TOE2(3)
--------->
ARR11(3)
--------->
ANAC58
<---------
ZAT18
--------->
TOE1(3)
<---------
ARR11(3)
--------->
ANAC58
--------->
ZAT18
--------->
At4g35610
<---------
AHL20(1)
<----
ttccaaggaatattcttcctatggtacactcacgatgttgttgttttgtttatcaaactaagcttaataattttcggaatattttaaattcggattttct
17410500
<------
MYB83
<------
MYB46(1)
<--------
-------->
HAHB4
------>
MYB46(1)
<---------
ICU4
--------->
ATHB12
-------->
P
--------->
ICU4
--------->
ICU4
------>
MYB83
<---------
AHL20(2)
<----------
DOF2
------>
ZmHOX2a(1)
--------->
AHL20(2)
<---------
DAG2
<------
----
GT1
--------->
ICU4
<---------
ICU4
<---------
YAB1
<---------
ATHB12
------
DOF2
<-------
GAMYB
<---------
ATHB12
--------->
YAB1
<---------
YAB1
ttcctaccatttgattcttcatattgctaccgttgtaatgacttacacatcgaatcattccatttaaaaatcataattcaaactttttgaaatgattggt
17410600
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AGI:
At2g41710.1
Description:
ovule development protein, putative. Identical to AP2-like ethylene-responsive transcription factor At2g41710 [Arabidopsis Thaliana] (GB:Q8GWK2;GB:O22949;GB:Q8LA00); similar to WRI1 (WRINKLED 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G54320.3); similar to WRI1 (WRINKLED 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G54320.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82222.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471)
Range:
from: 17407100
to: 17410128
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.