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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
DAG2
<----------
DOF2
--------->
ANAC58
<----------
DOF2
<---------
ZAT18
--------->
ANAC46
---------->
DOF2
--------->
ZAT18
--------->
ANAC58
------>
ZmHOX2a(1)
--------->
DAG2
<-----------
GT1
--------->
TOE2(3)
<-----------
GT1
-------
---------->
DOF2
<---------
AHL20(2)
--------->
YAB1
--------->
TOE2(3)
--------->
MYB46(3)
acaaaaaaaaaaaaaagtcccctttatattatttgcctcacaagtcacaatcgaaactctagcttaatcctaaaagtttgacttttcatccaccattaaa
15760600
--------->
HSFB2a(2)
--------------->
AGL15
<---------------
AGL15
--------->
GLK1(2)
<---------
AHL20(2)
<---------
GLK1(2)
----
--------------------->
WRI1
<---------
AHL20(2)
<----------
DOF2
-----
--------->
ATHB12
--------->
AHL20(2)
<-----------------
AGL3
-----
<---------
At4g35610
<---------
AHL20(2)
<-----------------
AGL2
--------->
ANAC46
-->
AHL20(2)
<---------
ATHB12
<---------
ZAT18
<---------
ZAT6
<---------
HSFB2a(2)
<------
acatttcatcttccattcattgaatttatagtagacttgactaattttatagtgttttccgattctttttttggaagaaagtcttacacgacgagtaaac
15760700
<---------
ICU4
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(1)
--------->
ICU4
<---------
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
<---------
AHL20(1)
--------->
ANAC58
<----------
ID1
--------->
TOE1(2)
--------->
AHL20(2)
--------->
ANAC58
----------->
GT1
--------->
TOE2(2)
----->
TOE2(3)
<---------
ANAC58
----------->
GT1
--------->
GLK1(2)
------>
GT1
<---------
ANAC58
--------->
DAG2
------->
TEIL
----
---->
ANAC46
--------->
ATHB12
--------->
RVE1(1)
---------->
DOF2
------
---
DOF5.7(2)
--------->
YAB1
<---------
AtLEC2
---------->
DOF2
--------->
ARR11(3)
<-----
gtaaaataaaatttgtttggcaatagtaatagattgggtttgcaagaaaatatcagaaggaaaaggaaaaatgaaagaac
ctgtgatgatggcagtgaga
15760800
<---------
DAG2
<---------
ARR14(2)
------>
MYB46(1)
--------->
ARR14(2)
<------
ZmHOX2a(2)
--------->
ANAC58
<---------
ARR14(2)
--------->
ANAC58
--------->
ARR14(2)
--------->
YAB1
---
<---------
ANAC46
--------->
AGP1
<----------
DOF2
<---------
bZIP60(1)
===
<---------
ANAC58
<---------
ARR11(3)
--------->
bZIP60(1)
<----
<---------
ANAC58
<---------
At4g35610
------>
MYB83
<-----------
GT1
<---------
ARR11(3)
------->
HVH21
--------->
At4g35610
<---------
ALFIN1
<-----------
HVH21
<-------
--->
At4g35610
<---------
ARR11(3)
--------->
At4g35610
<-----------
GT1
<---------
CCA1(2)
----
At4g35610
--------->
ARR11(3)
--------->
GLK1(1)
<----------
DOF2
--------->
ANAC46
-----
tgactggcatcaatggcttgagtaacatcttcagcagtagaagcagatccaaacccactctttccttttttccctgtcatcactccatatattcccat
ga
15760900
--------->
TOE2(3)
--------->
YAB1
--------->
AHL20(1)
<---------
ATHB51
<---------
REM1(1)
--->
ZmHOX2a(2)
--------->
AHL20(2)
--------->
YAB1
<-----------
RAV1(1)
===========================
HOX2a_HOX2a
------>
MYB83
--------->
TOE1(3)
--------
-----
ARR11(3)
<---------
AHL20(1)
------>
MYB46(1)
--------->
ARR11(3)
--
TOE1(2)
------>
ZmHOX2a(1)
---------->
DOF2
----------->
RAV1(1)
<---------
ARR11(3)
---->
ARR11(3)
XXXXXXXXXXXXXXXXXXXXX>
MIR830*
--------->
MYB46(3)
---------->
DOF2
--------->
MYB52(1)
tctctctctctctctctctcttcctctgcaaatattttagagaaagaaaatgaagaaaccaacaataataaaccctaaaagatgttgcagagcaaacaga
15761000
<---------
ANAC58
--------->
TGA1a
================
<---------
TGA1a
==================
<---------
TGA1a
--------->
ANAC58
--------->
TGA1a
--------->
ANAC58
<---------
O2
*
TSS
--------->
AHL20(2)
<------
ZmHOX2a(1)
----------->
TBP
<---------
MYB52(2)
========================
bZIP_DOF
--------->
ANAC58
<----------
DOF2
--------->
O2
--------->
ANAC58
========================
bZIP_DOF
<------
MYB46(1)
<---------
ANAC58
<---------
O2
<---------
AtLEC2
<---------
ANAC46
================
<-----------
GT1
<------
MYB83
--------->
ALFIN1
==================
----------->
GT1
<---------
MYB46(3)
<-----------
RAV1(1)
--------->
O2
-----
->
YAB1
---------->
DOF2
<---------
MYB46(3)
>>>>>>>>>
TBF1
<---------
ANAC58
<---------
ANAC58
atggagaagaaatagagaaagagagttacaagttggatggatggt
aaggaacgaagaagaaaactgtgtggctttaaataggctcacgcgtgagtagaga
15761100
<---------
ETT(2)
<---------
YAB1
--------->
ETT(2)
--------->
YAB1
----------->
HVH21
<---------
YAB1
<-------
GAMYB
<---------
TOE2(3)
--------->
AHL20(2)
<---------
At4g35610
<---------
AHL20(2)
--------->
YAB1
<---------
At4g35610
<---------
AHL20(1)
<---------
ICU4
<---------
WOX13(1)
======
bZIP_DOF
<---------
AHL20(2)
--------->
ICU4
<-------
GAMYB
======
bZIP_DOF
--------->
ICU4
----------->
HVH21
<---------
ARR11(3)
<------
=============
MYC_MYB
--------->
AHL20(1)
--------->
At4g35610
--------->
ARR11(3)
----------
=============
MYC_MYB
--------->
AHL20(2)
<---------
At4g35610
<---------
GLK1(2)
---------->
DOF2
----->
DOF2
----------->
GT1
<-----------
TBP
<---------
YAB1
----------->
ARR10
---------->
DOF2
aagtttgctgttgacaggtagtaattaattaagtttttatatgacagctaattataatcaatgtttagattttcgttgaatgactagaaaagaaagttac
15761200
--------->
TOE1(3)
--------->
TOE2(3)
--------->
ARR11(3)
<---------
ARR11(3)
<---------
GLK1(1)
--------->
GLK1(1)
<---------
GLK1(1)
<<<<<<<<<
GATA-3
--------->
ATHB12
<<<<<<<<<
GATA-4
----------->
GT1
--------->
YAB1
<<<<<<<<<
GATA-1
---------->
DOF2
<--------
ATHB1
<<<<<<<<<
GATA-2
--------------->
AGL15
<---------
ICU4
--------->
WOX13(1)
<---------
ZAT6
<---------
YAB1
<-----
-----
GT1
--------->
TOE2(3)
<---------
At5g28300
--------->
ICU4
<-----
->
GT1
----------->
GT1
--------->
ANAC46
<-----------
GT1
<---------
ATHB12
>>>>>>
tactgatatagtaaacatcaatccacagaaatcttaaaatttggattttactgtaaaggggtttatttggacaatgatttctcaaatattcaaattgact
15761300
<---------
AHL20(2)
<---------
ARR11(3)
--------->
YAB1
--------->
AHL20(1)
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(1)
<----------
DOF2
--------->
AHL20(1)
----
ANAC58
<---------
HSFB2a(2)
<-------
TEIL
--------->
AHL20(2)
----
ANAC58
--------->
HSFC1(1)
--------->
DAG2
<---------
AHL20(2)
----------
>>>>
WRKY18
--------->
HSFB2a(2)
---------->
DOF2
--------->
AHL20(2)
<---------
AHL20(1)
tgactatatatttgttaaacttctagagacttttatagtttatattcgtaaagtgcatactaaaaattaaaatgtacaagggattatattttgtaaagtt
15761400
--------->
TOE2(3)
<---------
ANAC55(2)
--------->
ANAC55(2)
<-------
TEIL
<------
MYB46(1)
<---------
YAB1
<----------
ID1
<------
MYB83
<---------
AHL20(2)
---------->
DOF2
--------->
MYB111(1)
--------->
YAB1
--------->
YAB1
--------->
AHL20(2)
<---------
ANAC46
<---------
YAB1
---------
--------->
ICU4
--------->
AHL20(2)
<---------------
AtSPL3
<---------
YAB1
>
DOF2
<----------
DOF2
---------->
DOF2
<---------------
AtSPL8
--------->
AHL20(2)
gtaatcttgaaatagacttttacaactaataaaaaagaaagacaaataaaacatttgagttggtacgtatacattagatgattcttgatttttataatta
15761500
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AGI:
At2g37540.1
Description:
short-chain dehydrogenase/reductase (SDR) family protein. similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G02540.1); similar to putative pod-specific dehydrogenase SAC25 [Brassica napus] (GB:CAB58175.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040)
Range:
from: 15758646
to: 15761045
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.