Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <----------DOF2                                                                                    <---------DAG2           <---------ANAC58  <---------ZAT18                                       <---------DAG2           <---------ANAC58<---------At4g35610                                  <---------ALFIN1      <---------ANAC58     --------->At4g35610                                 <---------MYB55(2)      <---------ANAC58<----------DOF2                                      ------>ZmHOX2a(2)        <   ------>ZmHOX2a(1) <---------ANAC58                                    <---------ARR14(2)       <-- ----------->RAV1(2) <---------ANAC58                     --------->MYB46(3) ------>ZmHOX2a(1)   <--- ---->ZmHOX2a(1) <----------DOF2                        <-----------GT1  --------->ARR14(2)     -----   ccttcctggccttccttgcctttgctttcagttccctcatttcaggctataacctatttaaccaaggctctctctgatcctcccacctttttgtataggt  15242400                                                     <---------AHL20(2)                                                     -------->ATHB1                                                     -------->HAHB4                                     <---------ARR11(3)   <-----------GT1                                     --------->ARR11(3)<---------YAB1                       <---------AHL20(2)           <---------YAB1                      --------->AHL20(2)            --------->ICU4                      --------->YAB1<---------CCA1(2)<---------ICU4                   --------->YAB1  <---------AHL20(1)--------->YAB1         <---------ANAC46  --------->ICU4           <---------ATHB51         <---------ANAC58<---------ICU4          <---------YAB1 ---------ALFIN1   ----------->GT1 --------->AHL20(1)<--------HAHB4              <---------TOE2(3) -------ALFIN1<---------ANAC46     <---------ARR11(3)--------->ATHB51          ---------->DOF2 ----TEIL<---------ANAC58--------->YAB1--------->TOE2(3)--------->YAB1  <---------ANAC46            - ---->TCP16(2)----------->GT1 <---------YAB1   ----------->GT1 <---------YAB1 <---------AHL20(2)   <-   ccacactccttgtgtgatgtataataaaaatgatcaatatatcttagcattgtaattattatactatttttgtagcctatataaaggtttccaaaaacta  15242500                                --------->DAG2                              ---------->DOF2                      ------>ZmHOX2a(1)                  --------->ARR11(3)                  <---------ARR14(2)                  --------->ARR14(2)                                                 <----------DOF2                 <---------GLK1(1)                              <-----------HVH21    <---------DAG2                 <----------TaMYB80                            ----------->HVH21 --------->MYB46(3)                 <---------CCA1(2)                          --------->GLK1(2)  ----------->RAV1(1) ---------->GT1  --------->GLK1(1)                --------->AHL20(2)       --------->DAG2  --------->At4g35610 --------TOE2(3)---------->TaMYB80    <----------DOF2  ---------->DOF2   ---------->DOF2   <---------At4g35610   tgaggttaataagagaggcatatcctgttgtcaaaagggtctttatagccaactaaataaagactctgacagagcaaaaggcaacaacttttcagctctt  15242600              ------>ZmHOX2a(1)          --------->ZAT18                                                                   ---------          <---------ZAT18                                 ------->TEIL        <-----------GT1      <-     <---------YAB1                                ------->TEIL           >>>>>>>>>TBF1     ---------   gagccatatgagtgtcctcgattgtaaatgagacctcagacttatccattgtgcatcttgaaccctgaagaaggaagaagaaaccatcttgcacaagccc  15242700                                                                                                <----                                                                                               <-----                                                                                              =======                                                                                          ---------->DOF2                                                                                        <------NtERF2                                                                                       <---------RAP2.6(3)                                                                                       --------->LBD16                                                                                       ------>NtERF2                                                                                      --------->DEAR3(1)                                                                                      <---------ATERF1(2)                                                                                      >>>>>>>>>AtERF-5                                                                                      >>>>>>>>>AtERF-4                                                                                      --------->ATERF1(2)                                                                   ----------->RAV1(2)>>>>>>>>>AtERF-3                                                                  ------>NtERF2       >>>>>>>>>AtERF-1                                                                 --------->ANAC58     >>>>>>>>>AtERF-2                                                                 --------->ANAC58     --------->ANAC46                                                                 --------->ANAC46     --------->RAP2.6(2)                     ----------------------->TaNAC69(2)         --------->SPL7        --------->RAP2.3(2)                 ----------->GT1           <---------ALFIN1    ------>ZmHOX2a(1)      --------->RAP2.3(3) >ANAC58      --------->DAG2      --------->ANAC55(2)         --------->TOE1(2)      --------->ERF1 --------ATHB12--------->DAG2    <---------TOE2(3)      ------>ZmHOX2a(1)            --------->RAP2.3(1) >ANAC58     ---------->DOF2    <-----------GT1    --------->GLK1(1)          ------------>CBF<------ZmHOX2a(1)   aatgtttaaaaatggaaaagggtattttagtcatttacgttttcgacactcggacttcctagttcctacgcctggagaatatcaatagccgccaaaggat  15242800                 --------->ARR14(2)                 <---------ARR14(2)           <---------ANAC58  *TSS<----------DOF2 ------>ZmHOX2a(2) -----WOX13(1)  <---------CCA1(2)--------->AHL20(2) -------CBF<---------ANAC58      <---------AHL20(2)                             <----------DOF2 =======HOX2a_HOX2a     <---------LBD16               --------->GLK1(2)       <---------At4g35610 <--   tgatcgtgcttttgcttcgtatcgtctctgggtttttaaatagagagactcgagagactctgtttgacaatagggttttgagctttctgagagttttata  15242900                                          --------->SPL7                                        <---------SPL7                                       <---------DEAR3(2)                                       <------MYB83                                       <------MYB46(1)                                      --------->MYB59                                      --------->MYB111(1)                                      --------->MYB46(2)                                      --------->MYB111(2)                                      <---------MYB46(3)                        ----------->HVH21                                      <---------------AtSPL8                  --------->At4g35610                              <---------ATHB12                           -------->P                              <------ZmHOX2a(2)                          ------>MYB83                     --------->YAB1  <---------MYB55(1)                  ------>MYB46(1)        <----                  <----------DOF2    <--------P                        --------->MYB46(3)       -----                 ------>ZmHOX2a(2) <---------MYB46(3)                ------>NtERF2             <-----               <---------ARR11(3)  --------->ATHB12              <---------ETT(2)    <---------ALFIN1 ---------GT1  --------->ARR11(3) <---------ATHB12     <---------ANAC46--------->AtMYB61   <---------O2   taacttgacaaagttttgatctttcatcaccgatcaatggttggtacgaagagagttgctgattccatcgacaccaactcggatgacacactcacgagga  15243000                                              <------ZmHOX2a(1)                                            <---------TOE2(3)                                         <---------MYB52(2)   <---------AtMYB61                --------->ANAC58 <---------MYB52(1)               ---------->DOF2 -----ARR14(2)                 <------ZmHOX2a(1)                            <------ZmHOX2a(1)  ------ ---->ARR14(2)    <---------DEAR3(1)--------->ANAC58   ------->GAMYB  ------->GAMYB        <---------ANAC58 -ZmHOX2a(1)     <---------------------WRI1--------->MYB52(1)<------ZmHOX2a(1)             <---------ANAC58   accgtgaggttgaagttgaggcgatgctcagtaggagaaagcaactaaggacaacaacgacgaggacaacaacgacgaggacaacaccattgagcttgtc  15243100                                                           ----------->GT1                                                       --------->MYB46(2)                                                       --------->MYB52(2)                                                       --------->MYB111(1)      <----------DOF2                               <-------GAMYB          <---------GLK1(2)    --------->At4g35610                         <---------LBD16           <---------ZAT2 <---------At4g35610                           <---------LBD16            --------->At4g35610 ------>ZmHOX2a(1)                   <---------ANAC58  <---------MYB46(3) <---------At4g35610     --- ---->ID1---------->DOF2             <---------ANAC58<--------P     <----------DOF2        <---------   ttcctctgcttcaaagatgaactggtctaaaaacgatgagcttgtcattctcggggttagttagtaaattctttgcagcttctctatattcttctttatc  15243200                                                                                                 <---                                                                                     ----------->HVH21                                                                                    ------>ZmHOX2a(2)                                                                                   --------->CCA1(2)                                                                                   <------ZmHOX2a(2)                                                                                   <---------At4g35610                         <---------ANAC46                                         --------->ARR14(2)                         <---------ANAC58               --------->YAB1            <---------ARR14(2)             <-----------GT1                     <---------ZAT18                  --------->ARR11(3)       <---------DAG2    <---------ANAC58        --------->ZAT18  --------->ANAC58<---------ARR11(3) --->ZmHOX2a(1)--------->ZAT6        ---------->DOF2   <---------YAB1             --------->AGP1 <--- -DOF2 <----------DOF2 <---------ANAC46       <---------ANAC46    --------->ANAC58<---------AGP1 <---   ctcttctaactttttttactctattttgtgtgtgtgtgtaaaagggtattgtggactatgagaatgaaacgaaattgagctatagatctgactgggatgc  15243300  Previous    Next  AGI:  At2g36330.1    Description:  Identical to UPF0497 membrane protein At2g36330 [Arabidopsis Thaliana] (GB:Q84WP5;GB:Q9SJM5); similar to integral membrane protein, putative [Arabidopsis thaliana] (TAIR:AT5G62820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64343.1); contains InterPro domain Protein of unknown function DUF588 (InterPro:IPR006702) Range:  from: 15240601    to: 15242532    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g36340.1    Description:  DNA-binding storekeeper protein-related. similar to DNA-binding storekeeper protein-related [Arabidopsis thaliana] (TAIR:AT2G25650.1); similar to hypothetical protein PFE0440w [Plasmodium falciparum 3D7] (GB:XP_001351647.1); contains InterPro domain Protein of unknown function DUF573 (InterPro:IPR007592) Range:  from: 15242802    to: 15244807    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.