Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                                                          --------->At5g28300
                                                        <---------YAB1  <---------TOE2(3)
                                                      <---------ICU4   <---------At5g28300
                            --------->AHL20(1)       --------->ICU4   --------->MYB52(1)
                            <---------AHL20(1)     --------->YAB1  <---------ICU4
                   --------->ARR14(2)             <---------YAB1  <---------AHL20(2)
                   <---------ARR14(2)       <---------ZAT14       --------->AHL20(1)               -
                  <---------CCA1(2)         --------->ZAT14--------->At4g35610               <------
                --------->YAB1            --------->bZIP60(1)     --------->AHL20(2)    --------->DAG2
<---------REM1(1) <---------GLK1(1)       <---------bZIP60(1)    --------->AHL20(2)    ---------->DOF2
 
aagttgtaactgagttgtatcatatccgatatatattagtatatgacttcactctcattatcagcgaaaaaaattacggtaaacagaccaaaaagtcttt  14840500
                                        <---------ARR11(1)
                                        --------->GLK1(2)
                                        --------->ARR14(2)
                                        <---------ARR14(2)
                                        ------->TEIL
                                       <---------ARR14(1)
                                   --------->At4g35610
                                   ------>NtERF2
                                <---------At4g35610                                    --------->YAB1
                                --------->At4g35610              --------->YAB1       --------->ICU4
                                --------->ZAT2                  <---------YAB1        <---------ATHB12
                                <---------ZAT2           --------->GLK1(2) --------->ANAC55(2)
-------->ANAC46                --------->ANAC46    <---------ZAT18       <---------ANAC46
----DOF2                   <-----------GT1         --------->ZAT18      <-------TEIL--------->YAB1
 
acaaacaatgaccaaaaaaacaatacgattttacaagctgccgaatctacaaattgcactaatctgtatcatagtttcatgtaacaacaatgatgttttt  14840600
                                                   ----------->GT1
                                                  --------->ALFIN1
                                                <---------ZAT6
                                                <---------ANAC46
                          <---------REM1(1)     --------->ALFIN1
                         <---------TOE2(3)    <---------ANAC46  --------->AHL20(1)
                   <---------YAB1           <---------ZAT14     <---------AHL20(1)
                   <---------AHL20(2)--------->AHL20(2)    <---------AHL20(2)
        --------->YAB1<---------WOX13(1)    --------->ZAT14--------->AHL20(2)   ----------->GT1
 
agagtttctaataagaaaatttttaattgatgtaacaaaaaaaaatgtgtagtgtgggaaattttaatatatatcagtgagtttagataaaaatttgaaa  14840700
                                     <---------ANAC46 <---------GLK1(1)
                             --------->ICU4           <----------TaMYB80
                        --------->ANAC55(2)           --------->GLK1(1)           <---------AHL20(2)
                        --------->ANAC58              --------->CCA1(2)           <---------YAB1
                        --------->ANAC58             --------->ARR14(2)    --------->ANAC58   ------
                        --------->bZIP60(2)          <---------ARR14(2)    --------->ANAC58<--------
                        <---------ANAC55(2)         =====================HOX2a_HOX2a       ---------
                        --------->ANAC46          <---------TOE2(3)      <---------ICU4    ---------
                        --------->ANAC55(1)     ---------->DOF2   ------>ZmHOX2a(2)        <--------
                     --------->MYB46(3)  <---------CCA1(2)        ----------->GT1 --------->AHL20(2)
 <-----------GT1   <-----------GT1   ----------->GT1<------ZmHOX2a(1) --------->YAB1  <---------LBD16
 
gttttaactacaattactaaattaaccacgtaatagtgagtcgtaaatctacaaaggatatgcgagggatcgataatcaaggcatataattcggagctga  14840800
                                 <---------TOE2(3)
                                 <---------TOE1(3)
   <---------TOE1(3)          <---------ARR14(2)              <---------YAB1
--->At4g35610                 --------->ARR14(2)          <---------ANAC58
-ZAT2                         <---------MYB52(1)          <---------ANAC58        <---------AHL20(2)
>ZAT2 <----------DOF2      <---------TOE2(3)            <---------PCF2        <---------AHL20(2)  <-
>At4g35610   --------->MYB52(2)  <---------YAB1      --------->ALFIN1       <----------DOF2    -----
-At4g35610 <---------MYB52(1)<-------GAMYB     <---------At4g35610         <---------ICU4 ----------
 
tgagttaagctttagttagtttgactaactacggttatggttaagacttaagcagagtggggcttattagtggattaatctttatttgattactccaata  14840900
                                                <-------TEIL
                                        --------->At4g35610                                 <-------
    <----------DOF2                    --------->MYB52(1)                                   <-------
   --------->TOE2(3)                --------->ANAC58                                        <-------
--------AHL20(2)           ------>ZmHOX2a(1)   --------->GLK1(2)                       ------->TEIL
---->YAB1       <---------CCA1(2)   --------->ANAC58     --------->ANAC58              --------->ARR14(2)
-->CBF<---------CCA1(2)   *TSS      --------->ANAC46     --------->ANAC58              <---------ARR14(2)
 
ttaaaacctttatctctccatctctctctccttcacaacaagcaactgagattcagagacaagaaaatgcaacgcgagaaaactcaaacgaatttgcgtt  14841000
                                                                            <---------ICU4
                                                                           <---------YAB1
                                                                           ------>ZmHOX2a(1)
                                                                           --------->ICU4
                                                                 <---------MYB52(1)
                                                                --------->LBD16
                                       --------->ANAC58        <---------DREB2C(2)         ---------
               <---------ANAC46        --------->ANAC58        <---------DEAR3(1)          ---------
              <------NtERF2       --------->ANAC58            <---------ANAC46            ------->TEIL
      --------->ALFIN1            --------->ANAC46            <---------ANAC58         --------->ANAC46
     <------ZmHOX2a(1)    --------->GLK1(1)                   <---------ANAC58         --------->ANAC58
--ANAC58   --------->ATERF1(1)    --------->ANAC58            <---------LBD16      ------>NtERF2
--ANAC46   <------NtERF2 --------->ARR14(2)               <-------GAMYB ---------->ID1 <---------MYB52(2)
--ANAC58<------ZmHOX2a(1)<---------ARR14(2)     <---------MYB52(1) <---------MYB46(3)  --------->ANAC58
 
tggacgaaggaggaggcagcgtttggcagaaatgctcaagacacgaaggtcgttttgtctgcgttgccggtgtttgtccttattgcctccacgaacgcct  14841100
                                                    --------->DEAR4(2)
                                                    <------NtERF2
                                                    --------->ATERF1(1)
                                                   <---------ATERF1(1)
                                                   ------>NtERF2
                                                  --------->ANAC46
                                                  --------->ANAC58
                                                  --------->ANAC58
                                        <---------ZAT14  --------->LBD16
                                        <---------ZAT18 <---------ANAC58
                                        --------->ZAT14 <---------ANAC46
                           ------>ZmHOX2a(2)     ------->MYC3
                          <------ZmHOX2a(2)      <-------MYC3
                         --------->ARR14(3)      ------->MYC2                   <---------O2
                         <---------ARR14(3)      <-------MYC2                   <---------ANAC58
                         <-----------ARR10       <-------PIF5<---------ANAC58   <---------ANAC46
                         --------->ARR11(3)      ------->PIF5<---------ANAC58   <---------ANAC58
                         <---------ARR14(2)     --------->ANAC58                <---------bZIP60(2)
                         --------->ARR14(2)     --------->ANAC46     --------->REM1(2)      --------
                         <---------ARR11(3)--------->ANAC46<-----------ARR10 ----------->HVH21  ----
=================================HOX2a_HOX2a    --------->ANAC58    --------->ALFIN1   <---------MYB52(1)
------>ZmHOX2a(1) <---------ZAT18    <---------ANAC58   <---------ANAC58     ----------->TGA1   <---
==================================HOX2a_HOX2a <---------ALFIN1    <---------ANAC46   <---------ANAC58
>ANAC58           <---------At4g35610<---------ANAC46 ------>NtERF2--------->LBD16   <---------ANAC58
>ANAC58           --------->At4g35610<---------ANAC58--------->DEAR3(1)   --------->DAG2--------->SPL7
 
ctcctctctctgtcccgattgtgctcacgatcttccctgttcgtgtactccacgcgcctccgtgtcttcccgtggagaaggtgacgtttcgttcgcccgt  14841200
             --------->ALFIN1
           <---------ANAC58
           <---------ANAC58
           <---------ANAC46
        <------MYB46(1)
        <------MYB83
      <---------MYB52(1)
      <--------P                                      <---------ETT(2)
     <-------GAMYB                                    --------->ETT(2)
    <------MYB83                                  <---------AtMYB61
    <---------MYB46(3)                     <----------DOF2               --------->ICU4            -
    <---------DEAR3(2)                    <---------ANAC58        <---------ANAC55(1)             <-
    --------->MYB55(2)                  --------->LBD16           --------->ANAC55(2)             --
    <------MYB46(1)                    --------->DEAR3(1)         <---------ANAC55(2)           <---
   <---------DEAR3(1)                 --------->DEAR3(2)          <---------ANAC58              ----
 <-----------HVH21         <---------WOX13(1)  <---------ANAC46   <---------ANAC58            ------
--------->AGL1           --------->ATHB12 <---------ANAC58        <---------ANAC46    <---------At4g35610
----->ARR14(2)          <---------YAB1--------->MYB46(3)         <---------LBD16      --------->At4g35610
------ARR14(2)--------->REM1(2)      --------->MYB52(1)<---------DDF1    ------>ZmHOX2a(1)  <-------
 
attgggtcggttggccgtgttgccaacttgattgaatgcgaaccggcgtttcggaggtcgacatcgattacgggtccttatttctggtctgctaaaccgg  14841300
                                  <---------ANAC58
                                  <---------MYB46(3)
                                  <---------ANAC46
                                  <---------ANAC58
                                 --------->ALFIN1
                                <-----------HVH21
                              --------->LBD16
                            <---------LBD16
                      ------>ZmHOX2a(2)
                     <------ZmHOX2a(2)                                                           ---
-------------->AGL15<---------ARR14(2)                                                           <--
----------------AGL3--------->ARR14(2)                                                    ----------
--------------->AGL3<---------ARR11(3)                                                    --------->MYB52(1)
------ARR14(2)      --------->ARR11(3)                                             --------->ANAC58
----->ARR14(2)     <------ZmHOX2a(1)                             <------ZmHOX2a(1) ----------->GT1
--->LBD16         <---------HSFC1(2)                          <---------At4g35610  --------->ANAC58
--LBD16           --------->HSFC1(2)      <---------MYB52(1)  --------->At4g35610--------->CCA1(2)
 
aaccgatattagaaactgagaaggatcttaaaccgggtcgtggacgttggctatggagattgttcagaggaaacagagaagaagagacgaaaataaaggc  14841400
<- Previous    Next ->

AGI:  At2g35200.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G32690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63405.1)
Range:  from: 14840927    to: 14841703    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.