Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <---------ANAC58                                                                               <---------ANAC46     -                                     --------->ZAT18                         --------->LBD16        <                                     <---------ZAT18                         ------>NtERF2         --                                    <------ZmHOX2a(1)                       <---------DEAR3(1)<------        <---------MYB46(3)     <---------ANAC58                            <---------LBD16    <------ ------->ANAC55(1)             <---------ANAC46                    <---------ALFIN1  --------->ANAC46 ------->ANAC55(2)             <---------ANAC58               <---------At4g35610   ------->TEIL   -- ------->ANAC46         --------->ARR11(3)                    --------->At4g35610--------->ALFIN1 <-- --------ANAC55(2)   --------->HSFB2a(2)     <---------ZAT6  <---------ARR11(3)<---------ANAC58  ----   cacgtatgagttgttgtcttcttagagaacttggcttaggacactcagtgtaaactctctcgagagcttccacttgctccggcgtgtacctcacatactt  14651000       <-----------GT1   <-----------ARR10   --------->GLK1(2)  <---------GLK1(2) <------NtERF2 -------->LBD16 ---------RAP2.6(3)   ------>NtERF2          <---------At4g35610                                    < ------->LBD16       --------->DEAR3(1)      --------->At4g35610          ---------->DOF2       <---- ---ANAC58  <----------DOF2            <---------ARR11(3)         <---------ICU4            --------- ---ANAC58  <---------DAG2             --------->ARR11(3)         --------->YAB1        <------ZmHOX2a(1) ------->ETT(1)    <---------ATERF1(1) <-----------ARR10         <---------YAB1        ----------->GT1 -------LBD16      --------->LBD16    <---------CCA1(2)        --------->YAB1          <----------ID1 ----->MYB52(1)  <---------LBD16    --------->YAB1             <---------ICU4         ----------->GT1   gccggaatctaaccctttatccggcgactctctgttcatcatatctctgctcatcgaatggaccatcatcatagctcaaagtcagaaataggaaaaaagg  14651100                                          <---------TOE1(2) --------->GLK1(2)                        <---------TOE2(2) ---------GLK1(2)                  <---------GLK1(1)        <------MYB83 --ZmHOX2a(1)   ---------->DOF2    --------->GLK1(1)        <------MYB46(1)         <---------ALFIN1- ->DOF2<---------YAB1 ----------->GT1    --------->STY1(1)<--------P  <---------REM1(2)      <-------TEIL   acgattcttttgaatgggtaaagcttgaaaattggagaaatccctaggttattttcaagggtaggctctctctactcagagagcctccactcacgttcat  14651200                                                                   <---------AHL20(2)                 --------->DAG2          --------->AHL20(2)      <---------AHL20(2)                 X                ---------->DOF2    ------------------------>ANAC81<---------YAB1                  <--         ----------->GT1          <----------ID1      --------->DAG2      <-----------GT1         --- -------->ARR11(3)             ---------->DOF2       ---------->DOF2   <---------AHL20(2)     <------   gagataatggtgagaaaaaaaaggagttttggagaaagaacaaataaacaaaaaaaaaagtttctatttttatttttttcggtttatttgttatttcttt  14651300                <-----------RAV1(2)             --------->ANAC58                                                    --------->ANAC58             --------->ANAC46                                                    --------->ANAC58   --------->ANAC58                                                         --------->DAG2   --------->ANAC58          <---------ANAC58                             --------->CCA1(2)  <------- XXXXXXXXXXXXXXXXXXX>MIR390A/B            <------ZmHOX2a(1)        ------------------------>ANAC81 -------At4g35610            <---------ANAC58       *TSS    --------->CCA1(2)<---------TOE2(3)  <---- ------>At4g35610     --------->ZAT18<------ZmHOX2a(1)    --------->CCA1(2)---------->DOF2   -------- ----DOF2    --------->ANAC58<---------ANAC46 <------ZmHOX2a(1)   <------ZmHOX2a(1) ---------->DOF2   agctcaagacagaaaacgccagagggcaatggcgagagaggagaggaaggagaagcgaagagataagaggagcaagataaaggaagcaaagtagaggtct  14651400                      ------>ZmHOX2a(2)                    <---------ARR14(2)                    --------->AGP1                                                         <------NtERF2                    <---------ARR11(3)                                                    ------>NtERF2                    --------->ARR14(2)                                                   <---------ANAC58         ------------>CBF                                                             --------->ALFIN1        ------>NtERF2<------ZmHOX2a(2)                                              <-----------RAV1(1)       --------->ANAC58                                                             <---------ANAC58       --------->ANAC46 <----------DOF2                                             <---------ANAC58       --------->ANAC58 ------>ZmHOX2a(1)                                         <---------ANAC46       --------->RAP2.6(2)                                --------->ZAT6  <---------DAG2 <---------ANAC46 --ARR11(3)         --------->ARR11(3)               --------->YAB1       <----------DOF2<---------ANAC58 ------DOF2        <---------GLK1(1)             --------->AHL20(2)    <-----------GT1<---------DEAR3(1) ->ARR11(3) <---------ARR14(2)              --------->AHL20(2) ---------->DOF2 <----------DOF2 ------   ttatctcagacgccaatctcgagatccttttaagacatggtccaaaaaaaataaaacataactctaaaagaaattacttttcttttgtgtggcgcgagaa  14651500                                                              <---------ANAC46                                                              <-------GAMYB                                                             <------MYB46(1)                                                             <------MYB83                                                            <---------MYB46(3)                                                           <--------P                                                           --------->ALFIN1                                                         <---------ZAT2                                                         --------->ZAT2                                                         <---------TGA1a                                                         --------->TGA1a                                                         --------->O2                                                         ==================================bZIP_DOF                                                         <---------O2                       <--------                                                         =========================================bZIP_DOF                                                         =============MYC_MYB               <--------                                    --------->AHL20(2)   =============================bZIP_DOF                           ----------->GT1             <-----------RAV1(2)                 <---------At5g28300                          <---------TOE2(3)         --------->ANAC58                   <----------DOF2                         --------->DAG2             --------->ANAC58                <-----------GT1                        ===========================================bZIP_DOF     <----------DOF2 ---->DOF2              ---------->DOF2             --------->ANAC46       ---------->DOF2<----------   agacttgcaagaacataaaaacagcataaaggtaaaaaaaaaatgaaaactgaaacgccaggtgggttgaatttgataaaagctttttacttttacggtt  14651600                                                    <-----------GT1                        --------->ARR11(3)       <---------AHL20(2)                        <---------ARR11(3)    <---------AHL20(2)                    <---------AHL20(2)        --------->AHL20(2)                   --------->AHL20(2)         --------->ATHB51                --------->AHL20(2)            <---------ICU4                --------->AHL20(1)            <--------ATHB1                <---------AHL20(2)           --------->ICU4                <---------AHL20(1)           <---------YAB1  <-----------GT1  <---------AHL20(2)      --------->YAB1  <---------AHL20(2)--------->AHL20(2)    <---------YAB1                           --------->ZAT18 -TOE1(3)      --------->AHL20(2)       --------->YAB1                             <---------ZAT18  - -TOE2(3)      <---------AHL20(2)   --------->ARR11(3)            --------->ARR14(2)             <--- -GT1        --------->YAB1         <---------ARR11(3) <----------DOF2             <---------ZAT14  <   ttatttacatagctaaaataaattaatatctactgcaaaatctcataataatttatactttgtgtccatatttgtactcaatgtgttcactaaaaacatt  14651700                                                                                    <---------ICU4                                                                                    <-----------GT1                                                                                 <---------ICU4                                                                                --------->ICU4                                                                            <---------ZAT18                                                                            <---------ZAT14        ---------->DOF2                                                     --------->ZAT18   ----------->GT1                                                          --------->ZAT14 -------->TOE2(3)                                 ---------->DOF2         <---------------AtSPL8 ------AHL20(2)  --------->ATHB12            ----------->GT1              --------------->AtSPL8 ----------DOF2 --------->ICU4           --------->AHL20(2)              <---------ANAC46   tactttagtaaaaagaaaatgatttgtccaaaaaaaaaaaaaaaaaaatgtaaaaagaaaatgcaattgagttttatgtgtactaattactacataagtt  14651800                                 --------->AHL20(2)                              --------->AHL20(2)                                 <---------AHL20(2)                              <---------AHL20(2)                                <---------AHL20(1)                              <---------AHL20(2)                                --------->AHL20(1)                           <---------ICU4<-------TEIL                                --------->AHL20(2)                          --------->ICU4--------->ALFIN1                                <---------AHL20(2)                          <---------ATHB51<--------                           --------->AHL20(2)                      --------->At4g35610 --------->DAG2                        --------->YAB1                       <---------AHL20(2) --------->AHL20(2)           <---------ANAC58<---------AHL20(2)                --------->AHL20(2) --------->YAB1           <---------ANAC58--------->AHL20(1)             --------->AHL20(2)--------->AHL20(2) ------   ----------->GT1--------->AtLEC2     <---------YAB1     --------->YAB1    <---------AHL20(2) <-----   tcttctggttataacttgtgatgcaaaaataaaataaaattattctagtatttgtagcaataaaaaattagctaagaaataattaaaataaggtgcagga  14651900  Previous    Next  AGI:  At2g34710.1    Description:  PHB (PHABULOSA); DNA binding / transcription factor. similar to PHV (PHAVOLUTA), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G30490.1); similar to REV (REVOLUTA), DNA binding / lipid binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G60690.1); similar to ATHB-8 (HOMEOBOX GENE 8), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G32880.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73584.1); similar to class III HD-Zip protein 3 [Populus trichocarpa] (GB:AAX19052.1); similar to class III HD-Zip protein 4 [Populus trichocarpa] (GB:AAX19053.1); contains InterPro domain MEKHLA (In Range:  from: 14646402    to: 14651352    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.