Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <------MYB83                                                                                             <------MYB46(1)                                                                                            <--------                                                                                         <---------MYB46(3)                                                                                         --------->ATHB12                                                                                        <---------TOE2(3)                                                                  --------->ATHB12      <---------YAB1                                                               --------->YAB1           <---------TOE1(3)                                   <---------At4g35610         <---------ICU4 <------NtERF2 <--------                               <----------DOF2                --------->ICU4 --------->LBD16--------- -------->TOE2(3)          <---------ETT(2)             <------ZmHOX2a(2)   --------->ANAC46--------- ->TOE2(3)                 --------->ETT(2)      <-----------RAV1(1)        <---------RAP2.6(2) ->TOE1(3)                ---------->ID1        <---------TOE2(3)<---------YAB1 ---------->DOF2>>>>>> ---DOF2              <----------DOF2      <---------YAB1--------->YAB1    <---------LBD16 <--------P   aaacttaaaaaaaaaaaaacttagctttgtcgactttagcttagtatgtttatgttggatcagaattatgatttgtatgcggcaaagtttatggttggtc  14452600                                                                                            <--------                                                                                  <---------AHL20(2)                                          --------->ANAC58             <---------YAB1       --------- -MYB46(3)                                --------->ANAC46           <---------ICU4<---------AHL20(2) -AtMYB61                                 --------->ANAC58           --------->YAB1--------->ATHB12 >MYB59   ---------->DOF2     --------->ALFIN1            <---------ANAC58     <---------AHL20(2) >MYB111(1)                 <---------ANAC58              <---------ANAC58 <---------MYB46(3) >>>>>>>>>>>LFY             <---------ANAC58              <---------ANAC46<--------P       <------ZmHOX2a(1)   cattgtttgatcaaaagaccgattccatggccgtggcagaaaccacgcatatgagaattggcttgtcttgatcatggttgtttatttattggaggattta  14452700                                                              <---------TOE2(3)    <---------YAB1                                  ----------->GT1    <---------TOE2(3)                          --------->ATHB12      ----------->GT1    <---------TOE1(3)                   --------->ZAT18      ---------->DOF2 ----------->GT1 <---------AHL20(2)         <---------ATHB12  ----------->HVH21  ---------->DOF2             -------- -ARR14(2)                  ------------>CBF  <---------YAB1--------->AHL20(2)             <--------- >ARR14(2)      ----------->GT1         <---------ZAT18     <---------AHL20(2)       --------->AHL20(2)   gaatttatggttagaaactggtaaaccgaaatcaatgcttagtgaaccatgactgggttaaattaaagaaagggcaaaatgggaatataaaatataccac  14452800                        ------------>CBF                        <------NtERF2          --------->ZAT14          --------->ZAT18          <---------ZAT14      ------------>CBF                                           --------->At4g35610   ----------->TBP   <---------At4g35610            <---------ANAC58                      <---------At4g35610 ------>ZmHOX2a(1)   --------->At4g35610 --------->AHL20(2)                         --------->DAG2 ->ANAC46 <-------TEIL --------->RAP2.6(2)<---------AHL20(2)   ------------>CBF    ---------->DOF2  < --GT1<---------------AtSPL8  <-----------GT1       <---------ANAC58           <----------ID1  <-----   atcctatataagtacactgagtaagcggcaattcacaatttgataaaatttcatgcgttagaatttgcaatttagcgagaagcgaaaaagtctgctcctt  14452900                                                               >>>>>>>ZML2                                                               <---------HSFB2a(2)                                                      --------->HSFB2a(2)                                                      <---------HSFB2a(2)                          --------->HSFB2a(2)   <---------CCA1(1)                 <---------TOE2(3)              <---------RVE1(1)             <----------DOF2                   --------->ARR11(3)               <---------AHL20(2)        --------->LBD16<-----------GT1         <---------ARR11(3) <---------GLK1(2)      <-----------RAV1(2)<-----------GT1       --------->ARR14(2) <---------ARR11(3)   <---------ARR14(2) ---------GLK1(2)<---------TOE1(3)             <---------ARR14(2) --------->ARR11(3)   --------->ARR14(2) -----DOF2  <----------DOF2                   <------ZmHOX2a(1)--------->HSFB2a(2)  --------->YAB1   tcgattcttcaggggttttagggtttttctcgactcgagtaagagcgaggatatttcgcgatgttctagattttgggtatttttaatcggaaccctagtt  14453000                            --------->At4g35610                    <------ZmHOX2a(1)   <---------ARR14(2)                       --------->ZAT14                        --------->ALFIN1   <----------ID1                       <---------ZAT14           <---------At4g35610     <------ZmHOX2a(1)   ------->TEIL                     --------->ZAT14<---------YAB1     <---------LBD16  <----------ID1 --------->ARR14(2)   tctctgtaatcgaaccatgtctcagtactcagacgacgattattcacatgaagatgactcggagatggaggatgaggacgaagaagacgaatatgaaccc  14453100                                                              <------NtERF2                                                             <---------DEAR3(2)                     <                                                            <---------DEAR3(1)                    ---                  <------ZmHOX2a(2)                         --------->ETT(1)                 --------                 --------->ARR11(3)                    <---------MYB52(1)                    ------>NtERF2                 <---------ARR14(2)               --------->GLK1(2)                         <--------                 <---------ARR11(3)              <---------ARR14(2)                         ---------               ----------->ARR10       <------ZmHOX2a(2)   <---------ORA47(1)              --------->ATERF1(1)         ---------->DOF2              --------->ARR11(3) <---------MYB46(3)                <------NtERF2       --------->LBD16                <---------ARR11(3)<---------AtMYB61                  --------->DEAR4(2)      --------->ANAC46        --------->DAG2     <---------GLK1(2)                        <---------ATERF1(1)      --------->RAP2.6(2)    --------->DAG2      --------->ARR14(2)       ---------->DOF2--------->ARR14(2)     --------->RAP2.3(1)    ---------->DOF2     <---------At4g35610  ----------->GT1     <---------ARR14(2)   agaagtagccgcaaaggaagatcagggaagaaaaggggaagatcaaattcagattccgatggtcggcgagggagtaaaaagaagtcttcgggctccgcct  14453200               <---------TOE1(3)            --------->ALFIN1           <-------GAMYB----------->STF1          <------MYB83----------->HVH21  <---------WRKY18(1) ----------->TGA1  --------->ATHB12  <---------At4g35610                                            >>>>>>>>>CBP60g --------->WRKY12  <-------TEIL                                                    >>>>>>>>>SARD1 --------->WRKY38(1)--------->At4g35610            --------->ALFIN1         --------->At4g35610 ---------WOX13(1)<--------P                     <---------bZIP60(2)    --------->MYB52(1)         <- ------>ATHB12 <---------TOE2(3)                 <---------ANAC46       ----------->RAV1(1)    ------ ->LBD16  <---------MYB46(3)                  <---------YAB1         --------->ANAC58         <------ -ALFIN1 <---------AtMYB61  --------->O2    --------->YAB1           --------->ANAC58     <---------ARR14(2) >DEAR3(1)<------MYB46(1)   <---------O2   --------->ICU4         --------->At5g28300 <---------LBD16   tcattgactgggaggttgaggtagatgacgacgtcgaagacgacgatgatgatgtggacgttgaagacggtaagcaacagttgaaatttggggatttttc  14453300                           --------->HSFB2a(1)                                   --------->WRKY45                           <---------HSFC1(2)                                    --------->WRKY38(1)                <---------WOX13(1)                                               --------->WRKY12           <---------ANAC58--------->HSFC1(2)                                  <----------DOF2       <---------GLK1(1) ---------->DOF2                                  <---------At4g35610 ---------DOF2--------->ATHB12        <---------YAB1                      --------->At4g35610   <---- ---->ID1  <---------ANAC58<---------HSFB2a(1)                     ---------->DOF2        ------->TEIL -----GT1  --------->TOE2(3)          <---------AHL20(2)<---------------------WRI1     <---------YAB1   tctttgttgaattccttgattgaattcgaaagttccagtttttattgattttgaagtagaagaatatcacaaagtcatctcctttgactatgaatttgca  14453400                                             --------->YAB1                             ------>ZmHOX2a(1)                           ----------------->AG                          ------>MYB46(1)   <---------YAB1                          ------>MYB83--------->GLK1(2)                        <---------MYB59  <---------YAB1                    ----------->HVH21<---------GLK1(2)             ------->GAMYB                    --------->WRKY12<------ZmHOX2a(1)            ------>MYB83                  <---------ZAT2  <---------TOE2(3)  <---------------------WRI1                <-----                  --------->At4g35610<---------ARR14(2)          ------>MYB46(1)               ------                  --------->ZAT2 --------->YAB1     --------->ANAC58                          -------                  <---------At4g35610--------->ARR14(2)     <-----------GT1                <---------ARR11(3)           --------->ALFIN1<-----------------AGL1   --------->ANAC58            ------>ZmHOX2a(1) -----TOE1(2) <---------REM1(1) --------->ICU4   <---------SPL7 --------->MYB52(1)         --------->ARR11(3)   ggtttcattgtaagtggtgaagctgaccttcctaatgaggattctgatcatcgtaggcaatattaccaacgggggtttcatcctcatgaagaagatgtcg  14453500  Previous    Next  AGI:  At2g34210.1    Description:  transcription initiation factor. Identical to Putative transcription elongation factor SPT5 homolog 2 [Arabidopsis Thaliana] (GB:O80770); similar to KOW domain-containing transcription factor family protein [Arabidopsis thaliana] (TAIR:AT4G08350.1); similar to hypothetical protein OsJ_019702 [Oryza sativa (japonica cultivar-group)] (GB:EAZ36219.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60892.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68098.1); contains InterPro domain Transcription antitermination protein, NusG, archaea; (InterPro:IPR003257); contains InterPro domain Translation protein SH3-like (InterPro Range:  from: 14453017    to: 14457601    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.