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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ARR14(2)
<---------
ARR14(2)
----------->
RAV1(1)
--------->
GLK1(2)
--------->
LBD16
<------
ZmHOX2a(1)
--------->
WOX13(1)
<-------
TEIL
<---------
DOF5.7(2)
----------->
RAV1(1)
------>
ANAC58
--------->
YAB1
<---------
ANAC55(2)
--------->
MYB46(3)
<--------
------>
ANAC58
--------->
WOX13(1)
<---------
ANAC46
<-----------
GT1
<--------
------>
ANAC46
<---------
CCA1(2)
<------
NtERF2
--------->
TOE2(3)
<----------
ID1
<--------
aagctatacagccaatctgcctatctatcatacatacattggctccgtaaacgaacaacatcaaattaacaacagtaggacgaagaacaaacttac
ttgt
13407600
<---------
ALFIN1
--------->
LBD16
--------->
AtMYB61
<---------
HSFC1(1)
<---------
ALFIN1
--------->
HSFC1(1)
--------->
bZIP60(2)
--------->
HSFB2a(2)
--------->
MYB52(1)
--------->
ANAC46
<---------
HSFB2a(2)
<---------
MYB52(2)
--------->
RAP2.6(2)
------>
MYB46(1)
--------->
LBD16
--------->
DAG2
------>
MYB83
<---------
HSFB2a(2)
---------->
DOF2
----------->
RAV1(1)
-
ANAC58
------>
ZmHOX2a(1)
--------->
ANAC58
--------->
MYB46(3)
-
ANAC46
--------->
DAG2
--------->
HSFB2a(2)
--------->
ANAC58
------>
NtERF2
<------
ZmHOX2a(1)
-
ANAC58
---------->
DOF2
<---------
LBD16
----------->
GT1
--------->
YAB1
<----------
DOF2
aaaccttccagaagagaaagcgaaggccttcctggaaacaaacagaggtgataacaagtaaagcataaggccaccacacattggctttgagaggaagaaa
13407700
<---------
ATHB12
--------->
WOX13(1)
--------->
SPL7
<---------
ATHB12
<---------
SPL7
--------->
ANAC46
<---------------
AtSPL3
------>
MYB46(1)
<--
------>
NtERF2
----------->
RAV1(1)
--------->
AtLEC2
---
--------->
LBD16
--------->
ANAC46
--------->
ANAC58
---------
<---------
ETT(1)
--------->
ANAC58
------>
MYB83
--------->
WOX13(1)
<--
<---------
ICU4
--------->
ANAC58
--------->
ANAC58
---------
tggtctccataatcccgacaagatgatcagactcacaagccacagcaacgta
ctgcattacatttaccaagcaaatcaatcaatctcccaaaaaccctaa
13407800
------>
MYB83
<---------
MYB59
--------->
MYB46(3)
--------->
ARR11(3)
<---------
ARR11(3)
----------->
GT1
--------->
ANAC58
--------->
LBD16
--------->
ANAC46
<
<-----------
RAV1(2)
--------->
ANAC58
----
<-----------
GT1
--------->
ANAC46
--------->
ANAC58
-----
-------
ICU4
--------->
GLK1(2)
----------->
RAV1(1)
<----
------>
AHL20(2)
<---------
HSFB2a(2)
--------->
ANAC58
-----
>
TOE2(3)
<-----------
ARR10
------>
MYB46(1)
<-----
-------
AHL20(2)
--------->
HSFB2a(2)
--------->
ANAC46
<---------
LBD16
<-------
>
TOE1(3)
--------->
RVE1(1)
--------->
ANAC46
<----------
DOF2
--------
ttttttccaggtaaaaatcttcgcgaaatacccaacatttcgaagcaatcgaattgaatcacatagatagcttttgggggaaacaaaaaaaaaacaatcc
13407900
<---------
ANAC46
--------->
MYB52(1)
--------->
At4g35610
----------->
HVH21
---------
KAN4(2)
----------->
TGA1
----->
LBD16
<---------
LBD16
--------->
At4g35610
---->
ANAC46
----------->
RAV1(2)
--------->
LBD16
---------->
DOF2
-----
ANAC55(2)
--------->
GLK1(2)
<---------
HSFB2a(2)
------
---->
ANAC55(2)
------->
TEIL
---------->
DOF2
<---------
At4g35610
---------->
DOF2
----
LBD16
---------->
DOF2
--------->
ZAT14
<---------
LBD16
--------->
ANAC58
--
ARR14(2)
---------->
DOF2
<---------
ZAT14
<----------
DOF2
--------->
ANAC58
->
GLK1(2)
----------->
GT1
--------->
ARR11(3)
<------
ZmHOX2a(1)
--------->
HSFB2a(2)
--------->
DAG2
ggaataagcagagcgattgtgaaaaaagaaagaac
ctggagagaacagtgaggatgagaaagggctttctggagatgacggagacgaaaagtgaaagaga
13408000
<---------
MYB52(1)
------>
NtERF2
------>
NtERF2
----------->
HVH21
------>
NtERF2
<------
NtERF2
--------->
LBD16
--------->
DEAR3(1)
--------->
RAP2.6(2)
<------
NtERF2
<---------
ATERF1(1)
<---------
ANAC46
------>
NtERF2
--------->
AtMYB61
--------->
ANAC46
<---------
ZAT2
<---------
GLK1(1)
<-----------
HVH21
--------->
MYB46(3)
--------->
MYB46(3)
--------->
MYB52(1)
------>
NtERF2
--------->
GLK1(1)
<---------
ALFIN1
--------->
ANAC58
--------->
ARR14(2)
--------->
ANAC58
--------->
ANAC58
<---------
ARR14(2)
--------->
AtLEC2
---------->
DOF2
--------->
ARR14(2)
<-----------
HVH21
------>
ZmHOX2a(1)
<---------
ARR14(2)
<---------
RAP2.6(3)
--------->
WRKY18(1)
--->
CCA1(2)
<---------
ALFIN1
<---------
LBD16
--------->
ANAC58
<----------
ID1
--------->
ANAC46
cggtcctaaagccaccagcgcgtagccgatacccgccgcgaccgtcat
gccacaccggtctcagagactttcaaataggtcaaactctctctactccaaa
13408100
<-----------
GT1
<-----------
HVH21
<---------
O2
--------->
GLK1(2)
--------->
HSFB2a(2)
<---------
TGA1a
<---------
HSFB2a(2)
<---------
ANAC58
<---------
HSFC1(1)
<---------
bZIP60(2)
--------->
HSFC1(1)
<---------
ANAC58
<---------
LBD16
<---------
TOE2(3)
--------->
ARR14(2)
----------->
HVH21
<---------
ARR14(2)
----------->
TGA1
<-----------
<---------
ATHB12
<-----------
RAV1(1)
--------->
RVE1(1)
--------->
ATHB12
--------->
ARR11(3)
---------->
DOF2
<---------
MYB46(3)
<---------
ARR11(3)
------>
ZmHOX2a(1)
<---------
ARR11(3)
<------------
CBF
===========================================
bZIP_DOF
---------->
DOF2
------------>
CBF
<----------
DOF2
--------->
AHL20(2)
--------->
TOE2(3)
cgttgaaagaactcttgaatcgaatcaattgacaaaaaagagtctttttttgtggttctggaaccaaaaaaatctgacgtttcacatccttcattgaaaa
13408200
--------->
HSFC1(2)
<---------
HSFC1(2)
<---------
HSFB2a(1)
--------->
ZAT2
<---------
ANAC58
<---------
ANAC58
<-----------
GT1
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(1)
<---------
ZAT2
--------->
AHL20(2)
--------->
HSFB2a(1)
<------------
CBF
<---------
AHL20(2)
--------->
ANAC58
<---------
ICU4
--------->
ZAT6
<---------
AHL20(1)
<---------
AHL20(2)
<---------
YAB1
--------->
ARR11(3)
--------->
AHL20(1)
--------->
AHL20(2)
--------->
YAB1
<---------
ARR11(3)
--------->
AHL20(2)
------>
ZmHOX2a(1)
--------->
ICU4
--------->
ANAC46
<---------
TOE2(3)
--------->
AHL20(2)
--------->
ANAC58
<-------
TEIL
--------->
YAB1
--------->
ANAC58
-
CBF
<-----------
GT1
<---------
AHL20(2)
<---------
MYB59
<---------
YAB1
--------->
ANAC58
acttaaga
tttaacaccagaaaattaattaattaattacctgcaagcttcctaattaatatacatcgacaagttttcattatcaacattgcaagcctcga
13408300
<---------
ANAC58
<
<---------
ANAC58
--
<---------
ANAC46
--------->
YAB1
<------
<------------
MYB.PH3(1)
<---------
ATHB12
<---------
LBD16
----------->
HVH21
---------->
DOF2
----------->
GT1
---------->
DOF2
<------
ZmHOX2a(2)
agctctaacagttttcttggatgcaaagagaaactaatcaaaaaatggtttttttttttgttttactcaaaatacaaaagtcttggacttcgga
tcatgg
13408400
<---------
MYB52(1)
<------
ZmHOX2a(1)
<------
<---------
ANAC58
<---------
ZAT2
<------
<---------
ANAC58
<----------
DOF2
---------->
DOF2
<---------
ZAT14
----------
DOF2
<---------
GLK1(1)
<----------
DOF2
<---------
At4g35610
--------->
ZAT14
------->
MYB52(2)
<---------
ANAC58
--------->
ZAT2
----------->
HVH21
<------
---
YAB1
<-------
GAMYB
<---------
ANAC58
--------->
At4g35610
--------->
ZAT6
<------
NtERF2
ttctttgcttcggttagatttcttcaacttggaagatgggcttgatgtttctttgaatgcagcaggacaaagcttactgacactgcaggcttcgcagcgt
13408500
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AGI:
At2g31440.1
Description:
protein binding. Identical to Gamma-secretase subunit APH1-like [Arabidopsis Thaliana] (GB:Q8L9G7;GB:Q8VZI0;GB:Q9SIC5); similar to unnamed protein product [Vitis vinifera] (GB:CAO64781.1); contains InterPro domain Aph-1; (InterPro:IPR009294)
Range:
from: 13406386
to: 13408048
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At2g31450.1
Description:
endonuclease-related. similar to endonuclease-related [Arabidopsis thaliana] (TAIR:AT1G05900.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO64783.1); contains InterPro domain DNA glycosylase; (InterPro:IPR011257); contains InterPro domain Helix-hairpin-helix DNA-binding, class 1; (InterPro:IPR003583); contains InterPro domain Helix-hairpin-helix motif; (InterPro:IPR000445); contains InterPro domain HhH-GPD; (InterPro:IPR003265); contains InterPro domain Endonuclease III, iron-sulfur binding, conserved site-1; (InterPro:IPR004035); contains InterPro domain Endonuclease III, conserved site-2; (InterPro:IPR004036); contains Inter
Range:
from: 13408209
to: 13411254
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.