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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------>
ZmHOX2a(2)
--------->
ARR14(2)
--------->
LBD16
<---------
ARR11(3)
----------->
HVH21
--------->
ARR11(3)
<---------
LBD16
<---------
AGP1
----->
MYB83
--------->
AGP1
------->
P
--------->
YAB1
<----------
DOF2
----->
MYB46(1)
--------->
ICU4
--------->
ARR14(3)
-------
MYB46(2)
--------->
At5g28300
<------
ZmHOX2a(2)
-------
MYB111(1)
----------->
GT1
<---------
ARR14(2)
-------
MYB59
<---------
TOE2(3)
<---------
ARR14(3)
----------->
HVH21
------------->
AGL1
<---------
TOE1(3)
<---------
CCA1(2)
<---------
ANAC55(2)
------
--------------
AGL1
---------->
DOF2
--------->
HSFB2a(2)
--------->
DOF5.7(2)
--------->
ANAC58
--
MYB59
==================================
HOX2a_HOX2a
<-------
GAMYB
--------->
ANAC58
->
AtMYB61
===================================
HOX2a_HOX2a
<---------
MYB52(1)
----------->
GT1
--
DAG2
------>
ZmHOX2a(1)
--------->
At4g35610
<---------
DAG2
--------->
ANAC55(2)
--------
c
ctactccggacatgttgtccttaaggctgtaaaaatcagcatccagatcttgcat
tc
ctttttccgttaacaagtgacacaaacaagaaaaatgcaaag
12999400
<---------
HSFB2a(2)
--------->
HSFB2a(2)
--------->
At4g35610
<---------
At4g35610
--------->
ZAT2
<---------
ZAT2
-------
--------->
ANAC46
----------->
GT1
<---------
YAB1
--------->
ARR14(2)
<---------
ANAC55(2)
<---------
AHL20(2)
--------->
YAB1
<---------
ARR14(2)
--------->
ANAC55(2)
--------->
AHL20(2)
<---------
ICU4
--------->
YAB1
<-----------
GT1
<---------
AHL20(2)
<---------
ATHB12
--------->
ANAC58
----->
GT1
--------->
DAG2
<---------
ATHB51
--------->
ANAC58
-->
DOF2
<-----------
HVH21
---------->
DOF2
<-------
TEIL
--------->
ICU4
--------->
YAB1
<-------
tgaaattacatgtcatggttctgagcgataaagcaaataaatggttcataaactgactccaattatgactgctggaagtcataacaagcatatacttac
c
12999500
<------
MYB46(1)
--------->
LBD16
--------->
ARR14(2)
<---------
ETT(2)
--------->
ARR11(3)
----------->
HVH21
<---------
ARR14(2)
<---------
HSFB2a(2)
<-------
GAMYB
--------->
GLK1(1)
--------->
HSFB2a(2)
<------
ZmHOX2a(1)
<---------
KAN4(2)
<---------
LBD16
<-----------
RAV1(2)
<---------
At4g35610
<------
MYB83
<------
->
P
<---------
HSFB2a(1)
<---------
MYB46(3)
---------->
TaMYB80
--------->
ICU4
----
GT1
<-----------
RAV1(2)
<---------
ANAC46
<---------
TOE2(3)
<---------
YAB1
attttctggaccagaaggtttgcattcaggagtagcggttgacaaattcagcaaattgagaatatccagagattggtgttctcttaagtgttgattacta
12999600
<---------
ZAT14
--------->
ZAT14
--------->
ZAT2
<---------
ZAT2
------>
MYB46(1)
--------->
MYB52(1)
-------
<---------
At4g35610
--------->
ARR11(3)
----------
--------->
At4g35610
<---------
At4g35610
--------->
AHL20(1)
<-------
TEIL
<---------
ICU4
------>
MYB83
<---------
At4g35610
<-----------
RAV1(2)
--------->
YAB1
<---------
MYB59
------>
ZmHOX2a(1)
=================
<---------
ICU4
--------->
ANAC58
<---------
At4g35610
<---------
AHL20(1)
--------->
At4g35610
<---------
YAB1
--------->
ANAC46
<-------
GAMYB
--------->
At4g35610
<-----------
HVH21
---
YAB1
<---------
YAB1
--------->
ANAC58
<-----------
RAV1(1)
<---------
ARR11(3)
<---------
At4g35610
ttgtttatatcattactacagctctcagacccaactgtgaactgatgctgttgctgtctcctctgctcaaaatattgtttttgc
cttcaggtgcaacaaa
12999700
---
-----
-------
<--------
<--------
---------
<--------
---------
<--------
<---------
At4g35610
<--------
--------->
At4g35610
<--------
--------->
YAB1
<-------
MYC2
--------->
ZAT14
--------->
AHL20(2)
------->
MYC2
<---------
ALFIN1
<--------
<---------
AHL20(2)
--------->
ANAC58
<----------
ID1
--------->
ANAC46
=========
--->
DOF2
--------->
ANAC58
------->
MYC3
---------->
DOF2
<---------
At4g35610
----------->
TGA1
->
RAV1(1)
--------->
ANAC58
<-------
MYC3
<---------
ARR11(3)
--------->
At4g35610
----------->
HVH21
==
RAV
---------->
DOF2
--------->
ANAC58
--------->
ARR11(3)
<------
ZmHOX2a(1)
<---------
ZAT14
gatgaaattaaaagtgtaagcacaatgggaagcatatgctgacaaacatctcataaagagaacaagaaggagcttacacac
ctcttcttcactgacgtgt
12999800
--------->
ATHB12
<---------
WOX13(1)
-------->
HVH21
---->
ALFIN1
--------->
LBD16
-->
ALFIN1
--------->
HSFB2a(2)
-
ANAC55(1)
<---------
HSFB2a(2)
-
O2
<---------
LBD16
>
TGA1a
--------->
HSFB2a(1)
-
TGA1a
<---------
HSFB2a(1)
>
O2
*
TSS
--------->
DAG2
-
ANAC58
--------------->
AGL15
--------->
ICU4
--------->
ANAC58
-
ANAC46
<---------------
AGL15
--------->
ANAC58
--------->
ANAC58
-
bZIP60(2)
---------->
DOF2
------------>
CBF
>>>>>>>>>>
GT-3b
-
ANAC58
<-----------------
AGL1
--------->
ANAC58
<---------
YAB1
=======================
bZIP_DOF
--------->
YAB1
--------->
YAB1
<-----------
GT1
gtga
ctgattaccccaaaaggttcccagaaaacaataacaagtcaaaatgaaaacaaattataagaaaaataagctattatcccaacaccaagaggtttt
12999900
------->
GAMYB
<-----------
GT1
<------
ZmHOX2a(2)
--------->
MYB52(1)
--------->
DAG2
----------->
ARR10
--------->
YAB1
---------->
DOF2
------>
NtERF2
--------->
ANAC58
<----------
ID1
<----------
DOF2
------>
ZmHOX2a(1)
--------->
ANAC58
---------->
DOF2
<---------
At4g35610
<---------
ARR14(2)
--------->
ANAC46
<---------------
AGL15
--------->
At4g35610
--------->
ARR14(2)
<---------
ALFIN1
------->
TEIL
--------->
ZAT6
----------->
HVH21
--------->
ANAC46
agcttcaccccatttataacggacctctgaatttgaaatatcactaaaaggaaaaagtcactcacagcggctactttccgcctcgatcctcccatccatt
13000000
------>
NtERF2
--------->
DEAR3(1)
------>
NtERF2
<---------
ATERF1(1)
---
--------->
ANAC46
---
<---------
ARR14(2)
<---------
ARR11(3)
--------->
ANAC58
---
--------->
ARR14(2)
<---------
ZAT18
--------->
ANAC58
<----
<---------
MYB52(1)
--------->
ZAT18
--------->
bZIP60(1)
-----
--------->
LBD16
--------->
ZAT14
--------->
AHL20(2)
--------->
ANAC58
<---------
LBD16
<---------
ZAT14
<---------
AHL20(2)
<---------
MYB52(2)
<---------
ARR14(2)
--------->
SPL7
--------->
ARR11(3)
--------->
bZIP60(2)
------
--------->
GLK1(2)
<---------------
AtSPL3
--------->
AHL20(2)
--------->
ANAC58
<
gcagcattcgtagaaattccggttcttagagttttcaaattgtacgactgcacaaagatttcgaaattaaaatttcgacgccaccacgaacaattcgacc
13000100
-------
<---------
HSFC1(1)
--------->
HSFB2a(2)
<---------
HSFB2a(2)
--------->
AGP1
--------->
ARR11(3)
<---------
ARR11(3)
<---------
AGP1
<---------
ARR14(2)
--------->
ARR14(2)
<---------
CCA1(2)
==================
HOX2a_HOX2a
----------------->
AGL3
=======================
HOX2a_HOX2a
----------------->
AGL2
========================
HOX2a_HOX2a
------>
MYB52(1)
------>
ZmHOX2a(1)
------>
ZmHOX2a(2)
--->
MYB46(1)
--------->
TOE2(3)
<------
ZmHOX2a(2)
--->
MYB83
========================
HOX2a_HOX2a
-----
MYB55(2)
------>
ZmHOX2a(1)
<------
ZmHOX2a(2)
---->
MYB46(3)
--------->
WOX13(1)
=============================
HOX2a_HOX2a
--->
ANAC46
<---------
ANAC58
--------->
YAB1
<-----------
HVH21
--
---------
ATHB12
<---------
ANAC58
----------->
GT1
==============================
HOX2a_HOX2a
caacgattccataactaggttgcgattcactatcaattagtcactgagactgaaaattttgaatcctaatcctaaatttccgatcagatctagaagaatc
13000200
<---------
HSFC1(1)
<---------
HSFB2a(2)
--------->
HSFB2a(2)
--------->
HSFB2a(1)
--------->
HSFC1(2)
<---------
ARR11(3)
--------->
At4g35610
<---------
AHL20(1)
<---------
ARR11(3)
<---------
HSFB2a(2)
<---------
AHL20(2)
--------->
ARR14(2)
<-------
TEIL
---------->
DOF2
<---------
HSFB2a(1)
--------->
GLK1(2)
--------->
CCA1(2)
--------->
ARR11(3)
----------->
HVH21
<---------
GLK1(1)
--------->
ARR14(2)
--------->
AHL20(1)
--------->
HSFB2a(1)
--------->
ANAC46
--------->
ARR11(1)
--------->
CCA1(2)
<---------
HSFC1(2)
--------->
ANAC58
<---------
GLK1(2)
--------->
ARR11(3)
<---------
HSFB2a(1)
<-
-->
GLK1(2)
--------->
ANAC58
<---------
ARR14(2)
<---------
ARR11(3)
--------->
HSFC1(2)
<-
--------->
GT1
--------->
GLK1(1)
<-------
TEIL
<------
ZmHOX2a(1)
<---------
HSFC1(2)
<---------
ARR14(2)
taggtaaaatttctacgaaatccctcaaaaaacatacagattcgagagaggagaaagagatatatttagaaaattcgagaagcttcgacagtatctgaat
13000300
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AGI:
At2g30480.1
Description:
similar to hypothetical protein [Vitis vinifera] (GB:CAN65091.1)
Range:
from: 12994173
to: 12999804
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.