Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<---------------
AGL15
<---------
RVE1(1)
<---------
CCA1(1)
--------->
ARR11(3)
<---------
ARR11(3)
<-----------------
AG
<-----------------
AGL3
----------->
HVH21
--------->
YAB1
<---------
ICU4
--------->
YAB1
<---------
YAB1
--------->
YAB1
---------->
ID1
<---------
ICU4
----------->
GT1
---------->
DOF2
-------
AHL20(2)
----------->
GT1
---------->
DOF2
<---------
ATHB12
atatttgtggtatttttgaaaatggataaaaatgatatttttggaaagtagtataattttaaaaaacttctcccaataaagacatgaccaaaaatgtgtg
12011400
--------->
AHL20(2)
<---------
AHL20(2)
----------->
RAV1(1)
<---------
AHL20(2)
--------->
AtMYB61
<---------
AHL20(2)
--------->
ANAC46
----
--------->
AHL20(1)
----------->
RAV1(1)
--------->
AHL20(2)
<---------
AHL20(1)
<---------
ALFIN1
----------->
GT1
<---------
AHL20(2)
<---------
ARR14(2)
--------->
ANAC46
--------->
YAB1
<-----------
GT1
--------->
ARR14(2)
--------->
ANAC46
<---------
ATHB12
ttatttctatatatatttttttttttttttgatcaacatatactcttgtttctaatctgcattccctccaccacaaaaaaaaattcaaatgataaaatat
12011500
--------->
ATHB12
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
<----------
ID1
--------->
AtLEC2
<---------
ICU4
--------->
ANAC58
<---------
YAB1
<-----------
HVH21
<---------
ATHB12
<---------
AtLEC2
<---------
YAB1
<---------
ALFIN1
--------->
YAB1
--------->
AtLEC2
<---------
AHL20(2)
<-----------
GT1
--------->
WRKY18(1)
--------->
AHL20(2)
--------->
AHL20(2)
<-----------
HVH21
--------->
AHL20(1)
<---------
AHL20(2)
--------->
CCA1(2)
<---------
AHL20(1)
--------->
AHL20(2)
<-----------
GT1
--------->
YAB1
----------->
RAV1(1)
>>>>>>>>>
MYB98
--------->
AHL20(2)
----------
------>
DOF2
----------->
GT1
--------->
ANAC58
--------->
WOX13(1)
<---------
AHL20(2)
--------->
ANAC46
aaagaagaacaatgtggaaatataattgtcatgcaacacgacaaattaatcattcgagtaacataatttatacatataatatacaggtcatgcatgacat
12011600
--------->
YAB1
--------->
MYB46(3)
------>
MYB83
--------->
MYB52(1)
------>
MYB46(1)
---
--------->
ANAC55(2)
------->
GAMYB
<--------
--------->
ANAC55(1)
--------->
MYB46(3)
<--------
<---------
ANAC55(2)
<---------
MYB55(2)
--------->
ATHB12
--------->
YAB1
--------->
ANAC58
--------->
ANAC58
<---------
AHL20(2)
--------->
TOE2(3)
--------->
ANAC58
--------->
ANAC58
<---------
AHL20(2)
----------->
GT1
--------->
ANAC46
-------->
P
--------->
AHL20(2)
--------->
TOE2(3)
---------
--------->
ANAC46
--------->
WOX13(1)
<----------
DOF2
<---------
WOX13(1)
<---------
YAB1
->
HVH21
XXXXXXXXXXXXXXXXXXXX>
MIR401
<-------
TEIL
<---------
YAB1
--------------->
AGL15
tacaagacgtaactgaataaactaatatcaaccaactatcaagagtacatttctttaaatttgttttaattgatttcttaacttattatgttaattaata
12011700
<---------
WOX13(1)
<---------
AHL20(2)
<------------
CBF
-------->
GT1
----------->
TBP
<----------
DOF2
--------->
ANAC58
-
ICU4
<---------
AHL20(2)
<-------
GAMYB
--------->
ATHB12
*
TSS
<
-
AHL20(2)
--------->
AHL20(2)
<----------
DOF2
<---------
DAG2
--------->
ANAC46
<
>
AHL20(2)
--------->
YAB1
---------->
ID1
--------->
MYB46(3)
--------->
ANAC58
<
cagtttatttcatactcactctattatataaactcattttgtctctctttcgttgtcaacaacttttcttcattgacaaaaaca
cacaa
atggaaggaag
12011800
<------
ZmHOX2a(2)
<---------
ARR11(3)
--------->
YAB1
--------->
ARR11(3)
<-----------
HVH21
<---------
HSFB2a(2)
--------->
GLK1(1)
------->
GAMYB
--------->
HSFB2a(2)
<---------
GLK1(1)
<---------
DOF5.7(2)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
----------->
ARR10
---------
WRKY38(1)
<------
ZmHOX2a(2)
<---------
ARR14(2)
--------->
TOE2(3)
---------
WRKY45
--------->
ARR11(3)
<---------
ANAC58
<------
ZmHOX2a(2)
<------
ZmHOX2a(1)
---------
WRKY12
<---------
ARR11(3)
<---------
ANAC58
==============================
HOX2a_HOX2a
agtcaacgctctgtcaaacataaacgatctcgaacttcacaatttcttggtcgatccaaacttcgatcagttcataaacctcataagaggagatcatcaa
12011900
------
--------->
ARR14(2)
------
<---------
ARR14(2)
<--------
<---------
TOE2(3)
------>
ZmHOX2a(2)
----------->
RAV1(2)
<----------
>>>>>>>>>
WRKY18
--------->
ARR11(3)
---------->
DOF2
----------->
RAV1(2)
--------->
WRKY12
--------->
ATHB12
--------->
MYB52(1)
<---------
ALFIN1
accattgacgaaaacccagttcttgatttcgatcttggtccattacaaaacagcccctgtttcatagacgagaaccagttcatcccaacacctgtcgatg
12012000
<---------
ZAT2
--------->
ZAT2
--------->
HSFC1(2)
<---------
HSFC1(2)
--------->
LBD16
--------->
ANAC55(2)
<---------
ANAC55(2)
<-------
<---------
ANAC46
<---------
MYB46(3)
<---------
ANAC58
<---------
AtMYB61
<---------
ANAC58
<---------
DEAR3(1)
--->
WRKY12
----------->
HVH21
<---------
ICU4
<---------
ZAT6
<xxxxxxxxxxxxxxxx
smallRNA(s)
----->
HVH21
<---------
ANAC58
<---------
ATHB12
--------->
At5g28300
--------->
ALFIN1
-
ETT(2)
<---------
ANAC58
--------->
At4g35610
<---------
DEAR3(1)
<---------
MYB52(1)
-
HVH21
----------->
RAV1(2)
<---------
At4g35610
----------->
HVH21
<---------
DEAR3(1)
acctcttcgacgaattgcctgacttagactccaacgttgctgaatcattccgtagcttcgacggtgatagtgttagagccggtggtgaagaagatgaaga
12012100
--------->
LBD16
--------->
ANAC58
<---------
ANAC55(2)
--------->
ANAC55(1)
--------->
ANAC46
--------->
ANAC58
--------->
ANAC55(2)
--------->
PCF2
--------->
TCP15(1)
<---------
PCF2
-------->
HAHB4
------>
ZmHOX2a(2)
--------->
ATHB12
<---------
GLK1(1)
--------->
YAB1
--------->
ARR11(3)
<---------
ICU4
<----------
DOF2
--------->
ICU4
<------
ZmHOX2a(1)
--------->
ICU4
<---------
YAB1
================
HOX2a_HOX2a
<---------
YAB1
<---------
ICU4
--------->
HSFB2a(2)
<---------
DEAR3(1)
--------->
YAB1
--------->
SPL7
<---------
HSFB2a(2)
------->
GAMYB
--------->
ICU4
<-----------
HVH21
--------->
WRKY18(1)
--------->
MYB46(3)
--------->
MYB46(3)
--------->
TCP20
===============
HOX2a_HOX2a
--------------
WRI1
<---------
At4g35610
----------->
HVH21
------>
ZmHOX2a(2)
==============
agattacaacgacggtgatgattcttcagccactactacgaataatgatgggacccgtaagacgaagactgatcggtctaggactttgatctctgagaga
12012200
<-
--------
<------
MYB83
<------
MYB46(1)
--------->
MYB59
--------->
ARR14(1)
--------->
CCA1(2)
=============================
HOX2a_HOX2a
--------->
ARR11(3)
============================
HOX2a_HOX2a
<---------
ARR11(3)
<------
ZmHOX2a(1)
--------->
YAB1
<---------
ARR14(2)
<---------
TOE2(3)
<---------
ICU4
--------------->
AGL15
<---------
SPL7
<---------
GLK1(1)
<---------------
AGL15
<---------
ANAC58
<------
ZmHOX2a(2)
--------->
ANAC58
--------->
ARR14(2)
<---------
ANAC58
--------->
ARR11(3)
--------->
ANAC58
--------->
ARR11(1)
<---------
ANAC46
<---------
ARR11(3)
<--------
P
<-----------------
AG
<------
ZmHOX2a(1)
<----------
DOF2
------>
ZmHOX2a(2)
<---------
TOE1(3)
----------------->
AGL1
========
HOX2a_HOX2a
<---------
DAG2
--------->
GLK1(1)
<---------
TOE2(3)
<-----------------
AGL1
agaaggagagggcgtatgaaggataagctttatgcattgagatctcttgttcccaatattactaag
gtaagtcacaacattttcaagatttggtaatgac
12012300
Previous
Next
AGI:
At2g28160.1
Description:
ATBHLH029/BHLH029/FIT1/FRU (FE-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 1); DNA binding / transcription factor. similar to AMS (ABORTED MICROSPORES), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G16910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16746.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598)
Range:
from: 12011785
to: 12013199
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.