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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------>
ZmHOX2a(1)
--------->
TOE1(3)
--------->
TOE2(3)
------>
ZmHOX2a(2)
<---------
GLK1(1)
<------
ZmHOX2a(2)
--------->
GLK1(1)
<------
ZmHOX2a(2)
<---------
ARR11(3)
------->
GAMYB
--------->
ARR14(2)
<---------
At5g28300
--------->
ARR11(3)
-------
<xxxxxxxxxxxxxxxx
smallRNA(i)
<---------
AGP1
--------->
ANAC46
--------->
MYB52(1)
--------->
ICU4
--------->
ANAC58
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(i2)
--------->
DAG2
<---------
ARR14(2)
<---------
--------->
TOE1(2)
<-----------
GT1
---------->
DOF2
<---------
CCA1(2)
------>
MYB83
--------->
TOE2(2)
xxxxxxxxxxxxxxxx>
smallRNA(i)
<---------
YAB1
------>
MYB46(1)
xx
<xxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
<---------
ATHB12
----------->
ARR10
--------->
ANAC58
gttgctacatacgattaacggcgatcattttttgttacgctcttggcaataaagtgagcatcaagattagatctccttaactcaccaagcaattttcaat
9986100
<---------
At4g35610
--------->
AtLEC2
xxxxxxxxxxxxxxxx>
smallRNA(i)
--------->
WRKY18(1)
<-----------
HVH21
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(le3)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(le3)
--------->
AHL20(2)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
<---------
AHL20(2)
---------->
DOF2
--------->
ARR11(3)
<---------
YAB1
--------->
AHL20(2)
--------->
YAB1
<xxxxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
-->
WOX13(1)
<---------
ATHB12
<---------
AtLEC2
<----------
DOF2
<--------
--
GT1
--------->
WOX13(1)
<-----------
GT1
<xxxxxxxxxxxxxxxx
smallRNA(i)
--------->
TOE2(3)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
<---------
WOX13(1)
ccaaaaaattccctagtttctcaatcaaaagaagggactgaaatttacatgaaggtcatgcagacgacttttgttttaattgaataacataaaactttta
9986200
---------->
DOF2
--------->
YAB1
--------->
YAB1
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
CCA1(2)
--------->
AHL20(2)
<xxxxxxxxxxxxxxxxxxxxxx
smallRNA(le3)
<---------
AHL20(2)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
--------->
TOE2(3)
<------
--------->
DAG2
--------->
TOE1(3)
<XXXXXXXXXXXXXXXXXXXX
MIR1888
--------->
TOE2(3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
--------->
ARR11(3)
--------->
TOE1(3)
<----------
DOF2
<----------
DOF2
------->
TEIL
<---------
ARR11(3)
--------->
ARR11(3)
<---------
ARR11(3)
<---------
DAG2
<---------
YAB1
---------->
DOF2
<----------
DOF2
<---------
AHL20(2)
--------->
YAB1
--
DOF2
---------->
DOF2
--------->
ZAT6
--------->
AHL20(1)
<---------
ARR11(3)
--------->
ARR11(3)
ctcactttacaaaaaagtatgaatctataaccctagatttataaagatattagaaaactttttataaatcttaaattaataacaaagaactttaataaac
9986300
<----------
DOF2
<---------
ARR11(3)
<---------
MYB52(2)
<---------
TOE2(3)
--------->
MYB46(3)
<---------
TOE1(3)
--
<---------
WOX13(1)
<---------
DOF5.7(2)
<---------
AHL20(2)
--------->
ATHB12
---------->
DOF2
<-----------
GT1
<-------
--------->
GLK1(2)
--------->
TOE1(3)
--------->
YAB1
<---------
AHL20(2)
<---------
ARR11(3)
--------->
TOE2(3)
<--------
ATHB1
<---------
AHL20(2)
--------->
ARR11(3)
--------->
ANAC55(2)
--------->
YAB1
--------->
AHL20(2)
--------->
RVE1(1)
--------->
MYB52(1)
--------->
DOF5.7(2)
<---------
ATHB51
--------->
AHL20(2)
-----
GT1
<---------
YAB1
<-----------
GT1
--------->
ARR11(3)
<---------
ATHB12
--------->
AHL20(2)
tttttaaaaatcttgattgaataacaaacgattttacataatcgttaaagttcttttaaaatcataaaccaataataccccctaaatatttaatttatct
9986400
<---------
ZAT18
------>
NtERF2
<---------
ANAC58
<---------
ANAC58
<-----------
RAV1(1)
<-----------
RAV1(2)
<---------
ANAC55(2)
--------->
ALFIN1
----------->
GT1
--------->
AHL20(2)
--------->
ANAC55(2)
---->
ZmHOX2a(1)
<---------
ANAC55(2)
<-------
TEIL
------------>
CBF
----
GT1
<---------
ANAC46
----------->
TBP
--------->
AtLEC2
*
TSS
cctcaagtgttgcgcccatgttatgtaaaatttcatccctataaatacatcagatggtccaagaggtttcatgcatcaatacat
aatacattttcgcctt
9986500
<---------
At4g35610
<-----------
GT1
<---------
YAB1
<---------
AHL20(1)
<------
NtERF2
--------->
AHL20(2)
------>
NtERF2
<---------
AHL20(2)
<---------
ICU4
<---------
TOE2(3)
--------->
YAB1
--------->
HSFB2a(2)
<---------
ICU4
<---------
YAB1
--------------->
AGL15
--------->
AHL20(1)
<---------
HSFB2a(2)
--------->
ICU4
--------->
AHL20(2)
<---------------
AGL15
--------->
ANAC55(2)
<--
<---------
ICU4
<-----------
GT1
<-----------------
AGL2
<---------
TOE2(3)
<------
--------->
ICU4
<----------
DOF2
<-----------------
AGL3
<-----------
GT1
<---------
cgactaaatattataatttagcttctttttttttctaattctcgtctcggtttttctagta
atggcgacgattaatgtttacgtttttgcatttatcttt
9986600
<------
NtERF2
<---------
GLK1(1)
<---------
MYB46(3)
<---------
TGA1a
--------->
ALFIN1
<------
MYB83
--------->
TGA1a
<---------
MYB46(3)
<------
MYB46(1)
--------->
MYB52(1)
<---------
ZAT2
<---------
AtMYB61
<---------
At5g28300
--------->
GLK1(1)
<---------
ZAT6
------>
MYB46(1)
<---------
O2
<---------
At4g35610
<--
--------
DOF2
<--------
P
------>
MYB83
--------->
O2
--------->
ZAT2
<--
----
DOF2
<-----------
RAV1(1)
<------
NtERF2
<-----------
GT1
<---------
TOE2(3)
<---------
MYB46(3)
--
GT1
<---------
YAB1
--------->
RAP2.6(2)
--------->
ANAC46
<------
ZmHOX2a(1)
<----
cttttgactattagtgttggttcaattgaaggccgaaaactcaccaaattcaccgtaacgacgtctgaggaaatcagagctggtggctctgtattgtcgt
9986700
------->
PIF5
--------->
LBD16
<-------
PIF5
--------->
O2
<---------
O2
<---------
LBD16
----------->
HVH21
--------->
DEAR3(1)
<----------
CDC5
<---------
ATERF1(1)
------>
NtERF2
--------->
ABI4(1)
--------->
ATERF1(2)
--------->
RAP2.3(2)
--------->
RAP2.3(3)
<---------
DEAR3(1)
<---------
ATERF1(2)
--------->
DEAR4(2)
--------->
ERF1
<------
NtERF2
<-------
GAMYB
--------->
RRTF1(1)
--------->
ATERF1(1)
--------->
RAP2.3(1)
--------->
ORA47(2)
--------->
RAP2.6(1)
<---------
ATERF1(1)
<---------
TGA1a
--------->
ANAC58
----------->
RAV1(2)
=======================
MYC_MYB
<---------
ARR14(2)
--------->
TGA1a
--------->
ANAC58
--------->
ARR14(2)
================================
MYC_MYB
--------->
ANAC58
<---
<---------
O2
<------
NtERF2
--------->
ANAC55(2)
<------
----------->
RAV1(2)
--------->
DEAR3(1)
--------->
ANAC58
<------
------>
NtERF2
<---------
RAP2.3(1)
--------->
ANAC46
<------
----------->
HVH21
<---------
ORA47(2)
------>
MYB83
--------
--------->
DEAR3(1)
<---------
DEAR3(1)
------>
MYB46(1)
--------->
GLK1(2)
--------->
At4g35610
--------->
DEAR3(1)
<---------
LBD16
<---------
MYB52(1)
<---------
At4g35610
--------->
ATERF1(1)
<--------
P
--------->
AtMYB61
--------->
LBD16
------
---------
TGA1
==================================
MYC_MYB
--------->
MYB52(1)
--------->
LBD16
<------
---------
HVH21
--------->
O2
--------->
ATERF1(1)
--------->
AGP1
<---------
LBD16
--------
--
NtERF2
<---------
ALFIN1
------>
NtERF2
<-----------
HVH21
<-----------
HVH21
--------->
KAN4(2)
cgtcacctccgactgagccacttgagtcgccgccgagccacggggttgataccttcagacctacggaacctggtcatagccccggtattggacattccgt
9986800
<----
<-------
------->
GAMYB
--------
--------->
MYB52(1)
<-------
<---------
ICU4
<-------
----
TEIL
<-------
---
ANAC58
<----------
DOF2
<--------
---
ANAC46
<---------
WOX13(1)
---------
---
ANAC58
--------->
ATHB12
---------
------->
AtSPL8
<---------
YAB1
<---------
DAG2
------->
TEIL
--->
LBD16
----------->
GT1
<---------
ANAC58
<---------
ANAC55(2)
---
ANAC55(2)
<------
ZmHOX2a(1)
<---------
ANAC55(2)
<---------
ANAC46
--------->
ANAC55(2)
------->
AtSPL3
--------->
ANAC55(2)
<---------
ANAC58
<-----------
GT1
<---------
acataattaa
cggagaggaacaatagcatcgtctatgtgattacatgttgaaaatatgattggcctggtgactttttttttctgaatatgtatttacgt
a
9986900
---
TEIL
--------->
AHL20(2)
--
ANAC58
--------->
AHL20(2)
->
ANAC55(2)
<---------
ICU4
<---------
TOE2(3)
--
ANAC46
--------->
ICU4
<---------
TOE2(3)
--
ANAC58
--------->
AHL20(2)
<---------
YAB1
--
ANAC55(2)
----------->
GT1
<---------
AHL20(2)
<-
-------
AtSPL8
<---------
YAB1
<---------
AHL20(2)
<---------
WOX13(1)
--
------>
AtSPL8
<---------
ANAC58
--------->
YAB1
--------->
AHL20(2)
<------
------>
AtSPL3
<---------
ANAC46
--------->
YAB1
<---------
AHL20(2)
---------->
DOF2
--
GT1
<---------
ANAC58
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
cagtttcgtcatattcagtttcttgcaagtgtgattgtaataatatttatttgattaaattaagattgatgtaatccatcttattttaaaagcacataca
9987000
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AGI:
At2g23440.1
Description:
unknown protein
Range:
from: 9986485
to: 9986899
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.